FFCP PHASE1:Mm9::chr17:35203116..35203134,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=106722|HGNC=|MCL_coexpression_id=294|UniProt=D3YVS6,D7PDD4|association_with_transcript=0bp_to_ENSMUST00000097337,NM_001033221,NM_001191012,uc008cfj.1,uc012aqy.1_5end|description=CAGE_peak_1_at_AU023871_5end|id=chr17:35203116..35203134,-|ontology_enrichment_celltype=CL:0000050!5.36e-07!9|ontology_enrichment_celltype_v019_2=CL:0000050,2.62e-12,9;CL:0000839,4.67e-08,13;CL:0000553,2.21e-07,6;CL:0000556,2.21e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.14e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0009569,3.69e-11,66;UBERON:0002107,3.27e-09,22;UBERON:0007499,3.27e-09,22;UBERON:0006925,3.27e-09,22;UBERON:0009497,3.27e-09,22;UBERON:0000015,3.27e-09,22;UBERON:0002423,3.27e-09,22;UBERON:0006235,3.27e-09,22;UBERON:0008835,3.27e-09,22;UBERON:0003894,3.27e-09,22;UBERON:0004161,3.27e-09,22;UBERON:0008836,3.27e-09,22;UBERON:0009854,1.07e-08,23;UBERON:0009856,1.07e-08,23;UBERON:0005177,2.52e-08,79;UBERON:0005172,5.60e-08,49;UBERON:0005173,5.60e-08,49;UBERON:0002417,5.60e-08,49;UBERON:0000916,5.60e-08,49;UBERON:0002365,8.54e-08,25;UBERON:0002330,8.54e-08,25;UBERON:0003914,6.40e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,4.45445588257617,2.09868563438444,1.73504190947031,1.64537320326887,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,3.07532393792285,15.8481681015439,0,0,0,0,0,0.523523743973798,0,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.247194967734374,2.31358971071859,30.9613693182456,0.970601099684455,5.52103796150984,0.969750506270444,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.203678727700633,7.83763914843586,0,0,0.650602214813519,0,0,0,0,0,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,1.07365135008297,0,0,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.407302655690628,0,0,0,0,0.156998727841375,0,0,5.5058884886311,5.89676985339609,5.39669069723649,3.44862206360455,3.85883455603867,5.34714288740982,9.49397253587675,6.48540907100142,3.0201755450689,5.75072826109418,2.23284568601102,0.624075346229121,0,0.179397413521912,0,2.95605104266567,0,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,2.92700471786698,1.41871629695572,2.21464689648775,0.956728611944923,1.80249646187312,1.03610989119537,1.01254341007058,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0.18542530201051,6.83483523191411,0.206386867963223,0.555583582109135,11.4904758772862,5.05768642567793,1.83022538565218,0.339956859987711,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0,0.621339313086926,0,0.598066184175915,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,0.341467211508268,1.21553358534147,0,0,0.666740183404846,1.23621034343337,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,0.280924522409647,0.320125762024346,0.402048282689293,1.42888107384922,1.15884325944855,0.77163688185482,0.824171801606613,0.588795680537589,0,0.70990322463735,0.476872379894642,0.872078499793971,0.658765662907314,0.761531471025089,0.914639864363863,0.789209134313529,0.543216455383447,2.80571135828869,0.593175090620871,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0,0.467863216890817,0.859484216193193,0.57386499620653,1.32354851471709,1.62307484934295|short_description=p1@AU023871}} | ||
|EntrezGene=106722 | |||
|HGNC= | |||
|MCL_coexpression_id=294 | |||
|UniProt=D3YVS6,D7PDD4 | |||
|association_with_transcript=0bp_to_ENSMUST00000097337,NM_001033221,NM_001191012,uc008cfj.1,uc012aqy.1_5end | |||
|description=CAGE_peak_1_at_AU023871_5end | |||
|id=chr17:35203116..35203134,- | |||
|ontology_enrichment_celltype=CL:0000050!5.36e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,2.62e-12,9;CL:0000839,4.67e-08,13;CL:0000553,2.21e-07,6;CL:0000556,2.21e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.14e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,3.69e-11,66;UBERON:0002107,3.27e-09,22;UBERON:0007499,3.27e-09,22;UBERON:0006925,3.27e-09,22;UBERON:0009497,3.27e-09,22;UBERON:0000015,3.27e-09,22;UBERON:0002423,3.27e-09,22;UBERON:0006235,3.27e-09,22;UBERON:0008835,3.27e-09,22;UBERON:0003894,3.27e-09,22;UBERON:0004161,3.27e-09,22;UBERON:0008836,3.27e-09,22;UBERON:0009854,1.07e-08,23;UBERON:0009856,1.07e-08,23;UBERON:0005177,2.52e-08,79;UBERON:0005172,5.60e-08,49;UBERON:0005173,5.60e-08,49;UBERON:0002417,5.60e-08,49;UBERON:0000916,5.60e-08,49;UBERON:0002365,8.54e-08,25;UBERON:0002330,8.54e-08,25;UBERON:0003914,6.40e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,4.45445588257617,2.09868563438444,1.73504190947031,1.64537320326887,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,3.07532393792285,15.8481681015439,0,0,0,0,0,0.523523743973798,0,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.247194967734374,2.31358971071859,30.9613693182456,0.970601099684455,5.52103796150984,0.969750506270444,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.203678727700633,7.83763914843586,0,0,0.650602214813519,0,0,0,0,0,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,0.56748166682099,0.584799949701329,1.09775057645525,1.07365135008297,0,0,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.407302655690628,0,0,0,0,0.156998727841375,0,0,5.5058884886311,5.89676985339609,5.39669069723649,3.44862206360455,3.85883455603867,5.34714288740982,9.49397253587675,6.48540907100142,3.0201755450689,5.75072826109418,2.23284568601102,0.624075346229121,0,0.179397413521912,0,2.95605104266567,0,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,2.92700471786698,1.41871629695572,2.21464689648775,0.956728611944923,1.80249646187312,1.03610989119537,1.01254341007058,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.328281799490123,0,0.18542530201051,6.83483523191411,0.206386867963223,0.555583582109135,11.4904758772862,5.05768642567793,1.83022538565218,0.339956859987711,0.139951452323658,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.330613822901344,0,0,0.621339313086926,0,0.598066184175915,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99512436700516,0.341467211508268,1.21553358534147,0,0,0.666740183404846,1.23621034343337,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,0.280924522409647,0.320125762024346,0.402048282689293,1.42888107384922,1.15884325944855,0.77163688185482,0.824171801606613,0.588795680537589,0,0.70990322463735,0.476872379894642,0.872078499793971,0.658765662907314,0.761531471025089,0.914639864363863,0.789209134313529,0.543216455383447,2.80571135828869,0.593175090620871,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0,0.467863216890817,0.859484216193193,0.57386499620653,1.32354851471709,1.62307484934295 | |||
|short_description=p1@AU023871 | |||
}} |
Revision as of 14:20, 13 September 2013
Short description: | p1@AU023871 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AU023871_5end |
Coexpression cluster: | MCL_coexpression_mm9:294 |
Association with transcript: | 0bp_to_ENSMUST00000097337, NM_001033221, NM_001191012, uc008cfj.1, uc012aqy.1_5end |
EntrezGene: | AU023871 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 2.62e-12 | 9 |
myeloid lineage restricted progenitor cell | 4.67e-08 | 13 |
megakaryocyte progenitor cell | 2.21e-07 | 6 |
megakaryocyte | 2.21e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 3.69e-11 | 66 |
liver | 3.27e-09 | 22 |
epithelial sac | 3.27e-09 | 22 |
digestive gland | 3.27e-09 | 22 |
epithelium of foregut-midgut junction | 3.27e-09 | 22 |
anatomical boundary | 3.27e-09 | 22 |
hepatobiliary system | 3.27e-09 | 22 |
foregut-midgut junction | 3.27e-09 | 22 |
hepatic diverticulum | 3.27e-09 | 22 |
liver primordium | 3.27e-09 | 22 |
septum transversum | 3.27e-09 | 22 |
liver bud | 3.27e-09 | 22 |
digestive tract diverticulum | 1.07e-08 | 23 |
sac | 1.07e-08 | 23 |
trunk region element | 2.52e-08 | 79 |
abdomen element | 5.60e-08 | 49 |
abdominal segment element | 5.60e-08 | 49 |
abdominal segment of trunk | 5.60e-08 | 49 |
abdomen | 5.60e-08 | 49 |
exocrine gland | 8.54e-08 | 25 |
exocrine system | 8.54e-08 | 25 |
epithelial tube | 6.40e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.