FFCP PHASE1:Mm9::chr1:132544045..132544050,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1389|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132544045..132544050,-|id=chr1:132544045..132544050,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.57e-10!47;UBERON:0005256!5.61e-09!47;UBERON:0002107!1.93e-08!22;UBERON:0007499!1.93e-08!22;UBERON:0006925!1.93e-08!22;UBERON:0009497!1.93e-08!22;UBERON:0000015!1.93e-08!22;UBERON:0002423!1.93e-08!22;UBERON:0006235!1.93e-08!22;UBERON:0008835!1.93e-08!22;UBERON:0003894!1.93e-08!22;UBERON:0004161!1.93e-08!22;UBERON:0008836!1.93e-08!22;UBERON:0009854!5.15e-08!23;UBERON:0009856!5.15e-08!23;UBERON:0002365!2.89e-07!25;UBERON:0002330!2.89e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.82e-13,22;UBERON:0007499,2.82e-13,22;UBERON:0006925,2.82e-13,22;UBERON:0009497,2.82e-13,22;UBERON:0000015,2.82e-13,22;UBERON:0002423,2.82e-13,22;UBERON:0006235,2.82e-13,22;UBERON:0008835,2.82e-13,22;UBERON:0003894,2.82e-13,22;UBERON:0004161,2.82e-13,22;UBERON:0008836,2.82e-13,22;UBERON:0009854,9.92e-13,23;UBERON:0009856,9.92e-13,23;UBERON:0002365,9.10e-12,25;UBERON:0002330,9.10e-12,25;UBERON:0005256,2.64e-10,45;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0001301,3.18e-07,3;UBERON:0006555,3.18e-07,3;UBERON:0005103,3.18e-07,3;UBERON:0000083,3.18e-07,3;UBERON:0009201,3.18e-07,3;UBERON:0004819,3.18e-07,3;UBERON:0006553,3.18e-07,3;UBERON:0003074,3.18e-07,3;UBERON:0003060,3.18e-07,3;UBERON:0009569,3.36e-07,66|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.05445516867349,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0,1.24815069245824,1.76805214562978,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr1:132544045..132544050,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1389 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:132544045..132544050,- | |||
|id=chr1:132544045..132544050,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.57e-10!47;UBERON:0005256!5.61e-09!47;UBERON:0002107!1.93e-08!22;UBERON:0007499!1.93e-08!22;UBERON:0006925!1.93e-08!22;UBERON:0009497!1.93e-08!22;UBERON:0000015!1.93e-08!22;UBERON:0002423!1.93e-08!22;UBERON:0006235!1.93e-08!22;UBERON:0008835!1.93e-08!22;UBERON:0003894!1.93e-08!22;UBERON:0004161!1.93e-08!22;UBERON:0008836!1.93e-08!22;UBERON:0009854!5.15e-08!23;UBERON:0009856!5.15e-08!23;UBERON:0002365!2.89e-07!25;UBERON:0002330!2.89e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.82e-13,22;UBERON:0007499,2.82e-13,22;UBERON:0006925,2.82e-13,22;UBERON:0009497,2.82e-13,22;UBERON:0000015,2.82e-13,22;UBERON:0002423,2.82e-13,22;UBERON:0006235,2.82e-13,22;UBERON:0008835,2.82e-13,22;UBERON:0003894,2.82e-13,22;UBERON:0004161,2.82e-13,22;UBERON:0008836,2.82e-13,22;UBERON:0009854,9.92e-13,23;UBERON:0009856,9.92e-13,23;UBERON:0002365,9.10e-12,25;UBERON:0002330,9.10e-12,25;UBERON:0005256,2.64e-10,45;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0001301,3.18e-07,3;UBERON:0006555,3.18e-07,3;UBERON:0005103,3.18e-07,3;UBERON:0000083,3.18e-07,3;UBERON:0009201,3.18e-07,3;UBERON:0004819,3.18e-07,3;UBERON:0006553,3.18e-07,3;UBERON:0003074,3.18e-07,3;UBERON:0003060,3.18e-07,3;UBERON:0009569,3.36e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.05445516867349,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0,1.24815069245824,1.76805214562978,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr1:132544045..132544050,- | |||
}} |
Revision as of 18:44, 13 September 2013
Short description: | p@chr1:132544045..132544050, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132544045..132544050, - |
Coexpression cluster: | MCL_coexpression_mm9:1389 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 2.82e-13 | 22 |
epithelial sac | 2.82e-13 | 22 |
digestive gland | 2.82e-13 | 22 |
epithelium of foregut-midgut junction | 2.82e-13 | 22 |
anatomical boundary | 2.82e-13 | 22 |
hepatobiliary system | 2.82e-13 | 22 |
foregut-midgut junction | 2.82e-13 | 22 |
hepatic diverticulum | 2.82e-13 | 22 |
liver primordium | 2.82e-13 | 22 |
septum transversum | 2.82e-13 | 22 |
liver bud | 2.82e-13 | 22 |
digestive tract diverticulum | 9.92e-13 | 23 |
sac | 9.92e-13 | 23 |
exocrine gland | 9.10e-12 | 25 |
exocrine system | 9.10e-12 | 25 |
trunk mesenchyme | 2.64e-10 | 45 |
epithelial tube | 6.83e-10 | 47 |
abdomen element | 1.64e-09 | 49 |
abdominal segment element | 1.64e-09 | 49 |
abdominal segment of trunk | 1.64e-09 | 49 |
abdomen | 1.64e-09 | 49 |
mesenchyme | 9.51e-08 | 61 |
entire embryonic mesenchyme | 9.51e-08 | 61 |
epididymis | 3.18e-07 | 3 |
excretory tube | 3.18e-07 | 3 |
mesonephric epithelium | 3.18e-07 | 3 |
mesonephric tubule | 3.18e-07 | 3 |
nephric duct | 3.18e-07 | 3 |
kidney epithelium | 3.18e-07 | 3 |
renal duct | 3.18e-07 | 3 |
mesonephric duct | 3.18e-07 | 3 |
pronephric duct | 3.18e-07 | 3 |
subdivision of trunk | 3.36e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.