FFCP PHASE1:Mm9::chr2:112082750..112082785,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=99010|HGNC=|MCL_coexpression_id=1573|UniProt=|association_with_transcript=-350bp_to_uc008lop.1_5end|description=CAGE_peak_6_at_Lpcat4_5end|id=chr2:112082750..112082785,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,4.51e-12,3;CL:0000239,3.03e-09,6;CL:0000677,3.03e-09,6;CL:0000584,3.03e-09,6;CL:0000075,6.08e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.50e-08!15;UBERON:0005409!6.15e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.19e-18,15;UBERON:0004923,2.28e-13,24;UBERON:0001242,1.61e-12,13;UBERON:0001262,1.61e-12,13;UBERON:0004786,1.61e-12,13;UBERON:0000331,8.82e-12,3;UBERON:0002116,8.82e-12,3;UBERON:0001204,8.82e-12,3;UBERON:0001168,8.82e-12,3;UBERON:0001962,5.87e-09,2;UBERON:0001961,5.87e-09,2;UBERON:0001744,5.87e-09,2;UBERON:0002108,6.00e-09,4;UBERON:0007023,3.70e-08,51;UBERON:0005409,2.85e-07,47|phase1_expression=0,2.44282785347553,1.36499771816861,0.60492842261366,0,1.17515490338323,1.63528848416868,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,18.879105889622,21.3350631392468,5.7423196411502,5.1691439539089,4.95583835177545,12.5415456841207,1.00812051903972,37.6941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0,0,0,0,0.511430914660661,0,0,0.101839363850316,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.472905432318573,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,1.64270195644597,0.21183207086382,0,1.15420377059036,0,0.542816324353403,1.67121281604391,2.1338316966858,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,3.81868247206045,0,0,0.108005340821801,4.39085421630384,2.62035076495413,0.809186078308924,0.495920734352016,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0,1.58711268530648,0.665957860122194,2.6017018416748,0.839423081820392,0,0.563047426353546,0.549454872801795,8.36036678408357,5.01572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0,0,0.824171801606613,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.818462086339379,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p6@Lpcat4}} | ||
|EntrezGene=99010 | |||
|HGNC= | |||
|MCL_coexpression_id=1573 | |||
|UniProt= | |||
|association_with_transcript=-350bp_to_uc008lop.1_5end | |||
|description=CAGE_peak_6_at_Lpcat4_5end | |||
|id=chr2:112082750..112082785,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.51e-12,3;CL:0000239,3.03e-09,6;CL:0000677,3.03e-09,6;CL:0000584,3.03e-09,6;CL:0000075,6.08e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.50e-08!15;UBERON:0005409!6.15e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.19e-18,15;UBERON:0004923,2.28e-13,24;UBERON:0001242,1.61e-12,13;UBERON:0001262,1.61e-12,13;UBERON:0004786,1.61e-12,13;UBERON:0000331,8.82e-12,3;UBERON:0002116,8.82e-12,3;UBERON:0001204,8.82e-12,3;UBERON:0001168,8.82e-12,3;UBERON:0001962,5.87e-09,2;UBERON:0001961,5.87e-09,2;UBERON:0001744,5.87e-09,2;UBERON:0002108,6.00e-09,4;UBERON:0007023,3.70e-08,51;UBERON:0005409,2.85e-07,47 | |||
|phase1_expression=0,2.44282785347553,1.36499771816861,0.60492842261366,0,1.17515490338323,1.63528848416868,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,18.879105889622,21.3350631392468,5.7423196411502,5.1691439539089,4.95583835177545,12.5415456841207,1.00812051903972,37.6941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0.510914110417183,0,0,0,0,0,0,0,0.511430914660661,0,0,0.101839363850316,0,0,1.68353484709179,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.472905432318573,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,1.64270195644597,0.21183207086382,0,1.15420377059036,0,0.542816324353403,1.67121281604391,2.1338316966858,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,3.81868247206045,0,0,0.108005340821801,4.39085421630384,2.62035076495413,0.809186078308924,0.495920734352016,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0,1.58711268530648,0.665957860122194,2.6017018416748,0.839423081820392,0,0.563047426353546,0.549454872801795,8.36036678408357,5.01572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0,0,0.824171801606613,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0.818462086339379,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p6@Lpcat4 | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p6@Lpcat4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lpcat4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1573 |
Association with transcript: | -350bp_to_uc008lop.1_5end |
EntrezGene: | Lpcat4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.51e-12 | 3 |
brush border epithelial cell | 3.03e-09 | 6 |
gut absorptive cell | 3.03e-09 | 6 |
enterocyte | 3.03e-09 | 6 |
columnar/cuboidal epithelial cell | 6.08e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.19e-18 | 15 |
organ component layer | 2.28e-13 | 24 |
intestinal mucosa | 1.61e-12 | 13 |
wall of intestine | 1.61e-12 | 13 |
gastrointestinal system mucosa | 1.61e-12 | 13 |
ileal mucosa | 8.82e-12 | 3 |
ileum | 8.82e-12 | 3 |
mucosa of small intestine | 8.82e-12 | 3 |
wall of small intestine | 8.82e-12 | 3 |
gut-associated lymphoid tissue | 5.87e-09 | 2 |
mucosa-associated lymphoid tissue | 5.87e-09 | 2 |
lymphoid tissue | 5.87e-09 | 2 |
small intestine | 6.00e-09 | 4 |
adult organism | 3.70e-08 | 51 |
gastrointestinal system | 2.85e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.