FFCP PHASE1:Hg19::chr6:75843119..75843139,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C259|description=CAGE_peak_at_chr6:75843119..75843139,-|id=chr6:75843119..75843139,-|ontology_enrichment_celltype=CL:0000057!2.47e-14!75;CL:0002620!1.02e-12!23;CL:0000499!7.30e-10!27;CL:0000055!6.61e-09!180;CL:0000136!2.08e-07!15;CL:0000153!2.55e-07!9;CL:0000447!2.55e-07!9;CL:0002334!3.00e-07!12;CL:0002579!4.02e-07!3;CL:0002615!4.18e-07!3;CL:0002580!4.51e-07!3|ontology_enrichment_celltype_v019=CL:0002579;3.57e-25;3!CL:0002615;3.72e-25;3!CL:0002580;4.75e-25;3!CL:0002334;4.92e-24;12!CL:0002617;1.07e-17;2!CL:0000136;9.72e-16;13!CL:0000153;1.45e-08;9!CL:0000447;1.45e-08;9|ontology_enrichment_celltype_v019_2=CL:0000136,8.99e-26,15;CL:0002579,3.29e-25,3;CL:0002615,3.88e-25,3;CL:0002580,5.37e-25,3;CL:0002334,5.03e-24,12;CL:0002617,1.07e-17,2;CL:0000057,5.28e-09,76;CL:0000153,1.28e-08,9;CL:0000447,1.28e-08,9;CL:0000134,3.30e-08,354;CL:0002320,5.68e-08,361;CL:0000219,3.86e-07,386;CL:0000048,5.81e-07,427;CL:0000723,8.27e-07,433|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.11e-09!5;DOID:450!1.11e-09!5;DOID:66!1.11e-09!5;DOID:423!1.11e-09!5;DOID:0080000!1.11e-09!5;DOID:11722!1.11e-09!5|ontology_enrichment_disease_v019=DOID:17;2.51e-07;5!DOID:450;2.51e-07;5!DOID:66;2.51e-07;5!DOID:423;2.51e-07;5!DOID:0080000;2.51e-07;5!DOID:11722;2.51e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.85e-07,5;DOID:450,2.85e-07,5;DOID:66,2.85e-07,5;DOID:423,2.85e-07,5;DOID:0080000,2.85e-07,5;DOID:11722,2.85e-07,5|ontology_enrichment_uberon=UBERON:0003102!2.20e-13!95;UBERON:0003688!1.41e-12!6;UBERON:0002358!1.41e-12!6;UBERON:0003684!1.41e-12!6;UBERON:0001178!1.41e-12!6;UBERON:0004457!5.81e-12!12;UBERON:0000042!5.81e-12!12;UBERON:0002097!2.61e-10!40;UBERON:0002199!1.00e-09!45;UBERON:0002416!1.00e-09!45|ontology_enrichment_uberon_v019=UBERON:0003688;1.64e-48;6!UBERON:0002358;1.64e-48;6!UBERON:0003684;1.64e-48;6!UBERON:0001178;1.64e-48;6!UBERON:0004457;2.31e-43;9!UBERON:0000042;2.31e-43;9!UBERON:0000310;1.92e-20;10!UBERON:0001443;1.42e-18;11!UBERON:0004458;4.00e-08;48|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.58e-48,6;UBERON:0002358,1.58e-48,6;UBERON:0003684,1.58e-48,6;UBERON:0001178,1.58e-48,6;UBERON:0004457,2.30e-32,12;UBERON:0000042,2.30e-32,12;UBERON:0000310,2.04e-20,10;UBERON:0001443,1.50e-18,11;UBERON:0004458,1.78e-09,49;UBERON:0004923,1.66e-08,66;UBERON:0002323,7.25e-08,46;UBERON:0002384,1.19e-07,371;UBERON:0009569,5.55e-07,112|phase1_expression=4.54195948176392,8.56402095563933,3.80576891059122,3.00219895059391,3.12872766099101,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,6.0835537963546,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.89694817844431,3.63047560991565,1.05965950579781,0.300091096084402,0.618315175430633,0.257640540045629,1.48893485065272,0.168776332241266,0.779496041289589,0.757301322732344,0.736399189138395,1.45481451136931,0.710019185033229,0.806016785821122,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,5.70647957983187,1.2276957863045,5.3325417942284,2.30650468660262,2.55853624533352,12.707459770345,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.229628896329213,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0.797594390929008,0,0.0897576444097721,0,0,0.549585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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75843119..75843139,- | |||
|id=chr6:75843119..75843139,- | |||
|ontology_enrichment_celltype=CL:0000057!2.47e-14!75;CL:0002620!1.02e-12!23;CL:0000499!7.30e-10!27;CL:0000055!6.61e-09!180;CL:0000136!2.08e-07!15;CL:0000153!2.55e-07!9;CL:0000447!2.55e-07!9;CL:0002334!3.00e-07!12;CL:0002579!4.02e-07!3;CL:0002615!4.18e-07!3;CL:0002580!4.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002579;3.57e-25;3!CL:0002615;3.72e-25;3!CL:0002580;4.75e-25;3!CL:0002334;4.92e-24;12!CL:0002617;1.07e-17;2!CL:0000136;9.72e-16;13!CL:0000153;1.45e-08;9!CL:0000447;1.45e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.99e-26,15;CL:0002579,3.29e-25,3;CL:0002615,3.88e-25,3;CL:0002580,5.37e-25,3;CL:0002334,5.03e-24,12;CL:0002617,1.07e-17,2;CL:0000057,5.28e-09,76;CL:0000153,1.28e-08,9;CL:0000447,1.28e-08,9;CL:0000134,3.30e-08,354;CL:0002320,5.68e-08,361;CL:0000219,3.86e-07,386;CL:0000048,5.81e-07,427;CL:0000723,8.27e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.11e-09!5;DOID:450!1.11e-09!5;DOID:66!1.11e-09!5;DOID:423!1.11e-09!5;DOID:0080000!1.11e-09!5;DOID:11722!1.11e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.51e-07;5!DOID:450;2.51e-07;5!DOID:66;2.51e-07;5!DOID:423;2.51e-07;5!DOID:0080000;2.51e-07;5!DOID:11722;2.51e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.85e-07,5;DOID:450,2.85e-07,5;DOID:66,2.85e-07,5;DOID:423,2.85e-07,5;DOID:0080000,2.85e-07,5;DOID:11722,2.85e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.20e-13!95;UBERON:0003688!1.41e-12!6;UBERON:0002358!1.41e-12!6;UBERON:0003684!1.41e-12!6;UBERON:0001178!1.41e-12!6;UBERON:0004457!5.81e-12!12;UBERON:0000042!5.81e-12!12;UBERON:0002097!2.61e-10!40;UBERON:0002199!1.00e-09!45;UBERON:0002416!1.00e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.64e-48;6!UBERON:0002358;1.64e-48;6!UBERON:0003684;1.64e-48;6!UBERON:0001178;1.64e-48;6!UBERON:0004457;2.31e-43;9!UBERON:0000042;2.31e-43;9!UBERON:0000310;1.92e-20;10!UBERON:0001443;1.42e-18;11!UBERON:0004458;4.00e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.58e-48,6;UBERON:0002358,1.58e-48,6;UBERON:0003684,1.58e-48,6;UBERON:0001178,1.58e-48,6;UBERON:0004457,2.30e-32,12;UBERON:0000042,2.30e-32,12;UBERON:0000310,2.04e-20,10;UBERON:0001443,1.50e-18,11;UBERON:0004458,1.78e-09,49;UBERON:0004923,1.66e-08,66;UBERON:0002323,7.25e-08,46;UBERON:0002384,1.19e-07,371;UBERON:0009569,5.55e-07,112 | |||
|phase1_expression=4.54195948176392,8.56402095563933,3.80576891059122,3.00219895059391,3.12872766099101,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,6.0835537963546,0,0.486634870302636,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.89694817844431,3.63047560991565,1.05965950579781,0.300091096084402,0.618315175430633,0.257640540045629,1.48893485065272,0.168776332241266,0.779496041289589,0.757301322732344,0.736399189138395,1.45481451136931,0.710019185033229,0.806016785821122,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,5.70647957983187,1.2276957863045,5.3325417942284,2.30650468660262,2.55853624533352,12.707459770345,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.229628896329213,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0.797594390929008,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,2.08698024724694,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0,1.19428766609585,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,1.2249819094128,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:75843119..75843139,- | |||
}} |
Revision as of 21:51, 13 September 2013
Short description: | p@chr6:75843119..75843139, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:75843119..75843139, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.99e-26 | 15 |
omentum preadipocyte | 3.29e-25 | 3 |
adipocyte of omentum tissue | 3.88e-25 | 3 |
preadipocyte of the breast | 5.37e-25 | 3 |
preadipocyte | 5.03e-24 | 12 |
adipocyte of breast | 1.07e-17 | 2 |
fibroblast | 5.28e-09 | 76 |
GAG secreting cell | 1.28e-08 | 9 |
carbohydrate secreting cell | 1.28e-08 | 9 |
mesenchymal cell | 3.30e-08 | 354 |
connective tissue cell | 5.68e-08 | 361 |
motile cell | 3.86e-07 | 386 |
multi fate stem cell | 5.81e-07 | 427 |
somatic stem cell | 8.27e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.58e-48 | 6 |
peritoneum | 1.58e-48 | 6 |
abdominal cavity | 1.58e-48 | 6 |
visceral peritoneum | 1.58e-48 | 6 |
cavity lining | 2.30e-32 | 12 |
serous membrane | 2.30e-32 | 12 |
breast | 2.04e-20 | 10 |
chest | 1.50e-18 | 11 |
body cavity or lining | 1.78e-09 | 49 |
organ component layer | 1.66e-08 | 66 |
body cavity | 7.25e-08 | 46 |
connective tissue | 1.19e-07 | 371 |
subdivision of trunk | 5.55e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.85e-07 | 5 |
myotonic disease | 2.85e-07 | 5 |
muscle tissue disease | 2.85e-07 | 5 |
myopathy | 2.85e-07 | 5 |
muscular disease | 2.85e-07 | 5 |
myotonic dystrophy | 2.85e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.