FFCP PHASE1:Hg19::chr7:134551583..134551599,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1441|TSSclassifier=S|UniProt=C9JE79|association_with_transcript=0bp_to_ENST00000435928_5end|description=CAGE_peak_48_at_CALD1_5end|id=chr7:134551583..134551599,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002138;2.50e-12;6!CL:0002618;5.70e-11;3!CL:0000222;1.88e-09;1!CL:0000062;3.21e-08;9!CL:0002139;7.27e-08;24|ontology_enrichment_celltype_v019_2=CL:0005020,2.14e-12,6;CL:0002138,2.14e-12,6;CL:0005022,2.14e-12,6;CL:0002618,5.16e-11,3;CL:0002139,6.64e-08,24;CL:0000115,2.93e-07,36;CL:0000062,8.82e-07,11;CL:0000375,8.82e-07,11;CL:0000335,8.82e-07,11|ontology_enrichment_development_v019=CL:0005022;2.50e-12;6!UBERON:0004872;1.69e-10;7!UBERON:0003124;1.60e-09;1!CL:0000335;8.30e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.48e-16!115;UBERON:0000477!2.84e-07!286;UBERON:0000481!5.68e-07!347;UBERON:0000475!9.93e-07!365|ontology_enrichment_uberon_v019=UBERON:0002106;5.70e-11;3!UBERON:0001473;2.26e-09;8!UBERON:0004536;2.26e-09;8!UBERON:0006558;2.26e-09;8!UBERON:0007029;3.87e-09;1!UBERON:0002134;7.55e-09;1!UBERON:0005208;7.55e-09;1!UBERON:0004145;7.55e-09;1!UBERON:0005946;7.55e-09;1!UBERON:0005965;7.55e-09;1!UBERON:0002078;7.55e-09;1!UBERON:0002465;1.37e-07;10!UBERON:0002405;5.73e-07;27!UBERON:0004177;6.37e-07;5!UBERON:0005057;6.37e-07;5!UBERON:0002066;6.37e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.42e-11,3;UBERON:0004854,3.42e-11,3;UBERON:0009034,3.42e-11,3;UBERON:0002095,3.42e-11,3;UBERON:0004782,3.42e-11,3;UBERON:0003281,3.42e-11,3;UBERON:0009664,3.42e-11,3;UBERON:0002296,3.42e-11,3;UBERON:0005602,3.42e-11,3;UBERON:0001179,3.42e-11,3;UBERON:0006293,3.42e-11,3;UBERON:0001473,2.02e-09,8;UBERON:0004536,2.02e-09,8;UBERON:0006558,2.02e-09,8;UBERON:0007029,3.31e-09,1;UBERON:0002134,6.22e-09,1;UBERON:0005208,6.22e-09,1;UBERON:0005946,6.22e-09,1;UBERON:0005965,6.22e-09,1;UBERON:0002078,6.22e-09,1;UBERON:0002465,1.25e-07,10;UBERON:0002066,6.00e-07,5|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,1.55050055501597,3.20189636418039,5.35552980423472,0,0,0,0,0,1.42879565254528,0,1.35133776579987,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0,0.151357427644931,1.15235184896,0,0,0,0,0.352303495931295,0,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0.558350568994769,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.448524337381443,0.43596006883328,0.36669142910475,0.258543431515556,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0,0.356857977594324,0.315404830067869,0.702848489956279,1.20378439891088,4.5481500811197,1.03473071292505,0.664225598535437,0,0.868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0.435050081742686,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0.430234056612155,0,0,0,0,0.329294892959902,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.134802265961354,0,0.234264445725339,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |||
|TSSclassifier=S | |||
|UniProt=C9JE79 | |||
|association_with_transcript=0bp_to_ENST00000435928_5end | |||
|description=CAGE_peak_48_at_CALD1_5end | |||
|id=chr7:134551583..134551599,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.50e-12;6!CL:0002618;5.70e-11;3!CL:0000222;1.88e-09;1!CL:0000062;3.21e-08;9!CL:0002139;7.27e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.14e-12,6;CL:0002138,2.14e-12,6;CL:0005022,2.14e-12,6;CL:0002618,5.16e-11,3;CL:0002139,6.64e-08,24;CL:0000115,2.93e-07,36;CL:0000062,8.82e-07,11;CL:0000375,8.82e-07,11;CL:0000335,8.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0005022;2.50e-12;6!UBERON:0004872;1.69e-10;7!UBERON:0003124;1.60e-09;1!CL:0000335;8.30e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-16!115;UBERON:0000477!2.84e-07!286;UBERON:0000481!5.68e-07!347;UBERON:0000475!9.93e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.70e-11;3!UBERON:0001473;2.26e-09;8!UBERON:0004536;2.26e-09;8!UBERON:0006558;2.26e-09;8!UBERON:0007029;3.87e-09;1!UBERON:0002134;7.55e-09;1!UBERON:0005208;7.55e-09;1!UBERON:0004145;7.55e-09;1!UBERON:0005946;7.55e-09;1!UBERON:0005965;7.55e-09;1!UBERON:0002078;7.55e-09;1!UBERON:0002465;1.37e-07;10!UBERON:0002405;5.73e-07;27!UBERON:0004177;6.37e-07;5!UBERON:0005057;6.37e-07;5!UBERON:0002066;6.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.42e-11,3;UBERON:0004854,3.42e-11,3;UBERON:0009034,3.42e-11,3;UBERON:0002095,3.42e-11,3;UBERON:0004782,3.42e-11,3;UBERON:0003281,3.42e-11,3;UBERON:0009664,3.42e-11,3;UBERON:0002296,3.42e-11,3;UBERON:0005602,3.42e-11,3;UBERON:0001179,3.42e-11,3;UBERON:0006293,3.42e-11,3;UBERON:0001473,2.02e-09,8;UBERON:0004536,2.02e-09,8;UBERON:0006558,2.02e-09,8;UBERON:0007029,3.31e-09,1;UBERON:0002134,6.22e-09,1;UBERON:0005208,6.22e-09,1;UBERON:0005946,6.22e-09,1;UBERON:0005965,6.22e-09,1;UBERON:0002078,6.22e-09,1;UBERON:0002465,1.25e-07,10;UBERON:0002066,6.00e-07,5 | |||
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|short_description=p48@CALD1 | |||
}} |
Revision as of 23:21, 13 September 2013
Short description: | p48@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_48_at_CALD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435928_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9JE79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.14e-12 | 6 |
endothelial cell of lymphatic vessel | 2.14e-12 | 6 |
vascular lymphangioblast | 2.14e-12 | 6 |
endothelial cell of umbilical vein | 5.16e-11 | 3 |
endothelial cell of vascular tree | 6.64e-08 | 24 |
endothelial cell | 2.93e-07 | 36 |
osteoblast | 8.82e-07 | 11 |
osteoprogenitor cell | 8.82e-07 | 11 |
mesenchyme condensation cell | 8.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.42e-11 | 3 |
gastrointestinal system mesentery | 3.42e-11 | 3 |
stomach region | 3.42e-11 | 3 |
mesentery | 3.42e-11 | 3 |
gastrointestinal system serosa | 3.42e-11 | 3 |
mesentery of stomach | 3.42e-11 | 3 |
gut mesentery | 3.42e-11 | 3 |
dorsal mesentery | 3.42e-11 | 3 |
dorsal mesogastrium | 3.42e-11 | 3 |
peritoneal cavity | 3.42e-11 | 3 |
spleen primordium | 3.42e-11 | 3 |
lymphatic vessel | 2.02e-09 | 8 |
lymph vasculature | 2.02e-09 | 8 |
lymphatic part of lymphoid system | 2.02e-09 | 8 |
surface | 3.31e-09 | 1 |
tricuspid valve | 6.22e-09 | 1 |
right atrium valve | 6.22e-09 | 1 |
outflow tract of atrium | 6.22e-09 | 1 |
outflow part of right atrium | 6.22e-09 | 1 |
right cardiac atrium | 6.22e-09 | 1 |
lymphoid system | 1.25e-07 | 10 |
umbilical vein | 6.00e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.