FFCP PHASE1:Hg19::chr7:55053327..55053342,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2898|description=CAGE_peak_at_chr7:55053327..55053342,+|id=chr7:55053327..55053342,+|ontology_enrichment_celltype=CL:0000066!6.11e-07!254|ontology_enrichment_celltype_v019=CL:0000076;8.40e-07;63|ontology_enrichment_celltype_v019_2=CL:0000076,2.87e-14,63|ontology_enrichment_development_v019=UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2|ontology_enrichment_disease=DOID:1749!3.60e-15!14;DOID:305!1.20e-11!106;DOID:0050687!1.45e-10!143;DOID:14566!1.33e-07!239;DOID:162!3.76e-07!235|ontology_enrichment_disease_v019=DOID:1749;3.50e-63;14!DOID:4556;1.19e-09;3|ontology_enrichment_disease_v019_2=DOID:1749,3.14e-63,14;DOID:305,1.71e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.66e-08,143|ontology_enrichment_uberon=UBERON:0001264!3.32e-07!10;UBERON:0003922!3.32e-07!10;UBERON:0003923!3.32e-07!10;UBERON:0003924!3.32e-07!10;UBERON:0003921!3.32e-07!10;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0003343;9.82e-26;4!UBERON:0004785;9.82e-26;4!UBERON:0000974;1.57e-17;6!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0003729;1.26e-08;13|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.93e-26,1;UBERON:0005056,5.93e-26,1;UBERON:0003343,8.66e-26,4;UBERON:0004785,8.66e-26,4;UBERON:0000974,5.98e-11,10;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0003729,1.22e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0,0,1.95984794828755,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.993573058514948,0,0,0.400794101257669,0,0,0,0,0,4.17758914165634,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26255835443057,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6129427695482,0,0,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,2.47026410200984,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr7:55053327..55053342,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2898 | |||
|description=CAGE_peak_at_chr7:55053327..55053342,+ | |||
|id=chr7:55053327..55053342,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.11e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000076;8.40e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,2.87e-14,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | |||
|ontology_enrichment_disease=DOID:1749!3.60e-15!14;DOID:305!1.20e-11!106;DOID:0050687!1.45e-10!143;DOID:14566!1.33e-07!239;DOID:162!3.76e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.50e-63;14!DOID:4556;1.19e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.14e-63,14;DOID:305,1.71e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.66e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001264!3.32e-07!10;UBERON:0003922!3.32e-07!10;UBERON:0003923!3.32e-07!10;UBERON:0003924!3.32e-07!10;UBERON:0003921!3.32e-07!10;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0003343;9.82e-26;4!UBERON:0004785;9.82e-26;4!UBERON:0000974;1.57e-17;6!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0003729;1.26e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.93e-26,1;UBERON:0005056,5.93e-26,1;UBERON:0003343,8.66e-26,4;UBERON:0004785,8.66e-26,4;UBERON:0000974,5.98e-11,10;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0003729,1.22e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.20453736500431,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0,0,1.95984794828755,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.993573058514948,0,0,0.400794101257669,0,0,0,0,0,4.17758914165634,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26255835443057,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6129427695482,0,0,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,2.47026410200984,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr7:55053327..55053342,+ | |||
}} |
Revision as of 01:36, 14 September 2013
Short description: | p@chr7:55053327..55053342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:55053327..55053342, + |
Coexpression cluster: | C2898_oral_giant_large_epidermoid_squamous_embryonic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 2.87e-14 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.93e-26 | 1 |
external female genitalia | 5.93e-26 | 1 |
mucosa of oral region | 8.66e-26 | 4 |
respiratory system mucosa | 8.66e-26 | 4 |
neck | 5.98e-11 | 10 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
mouth mucosa | 1.22e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.14e-63 | 14 |
carcinoma | 1.71e-11 | 106 |
lung large cell carcinoma | 1.19e-09 | 3 |
cell type cancer | 1.66e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.