FFCP PHASE1:Hg19::chr7:7223143..7223146,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:7223143..7223146,+|id=chr7:7223143..7223146,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000895;3.28e-23;1!CL:0000746;8.63e-09;3!CL:0002623;8.63e-09;3!CL:0000898;1.21e-08;3!CL:0000737;6.68e-07;4|ontology_enrichment_celltype_v019_2=CL:0000810,6.40e-23,1;CL:0000895,6.40e-23,1;CL:0002436,6.40e-23,1;CL:0002427,6.40e-23,1;CL:0002428,6.40e-23,1;CL:0002429,6.40e-23,1;CL:0002433,6.40e-23,1;CL:0002431,6.40e-23,1;CL:0002432,6.40e-23,1;CL:0000893,3.62e-12,2;CL:0002489,3.62e-12,2;CL:0000809,3.62e-12,2;CL:0000808,3.62e-12,2;CL:0000894,3.62e-12,2;CL:0000806,3.62e-12,2;CL:0000807,3.62e-12,2;CL:0000805,3.62e-12,2;CL:0002425,3.62e-12,2;CL:0000746,8.31e-09,3;CL:0000513,8.31e-09,3;CL:0002623,8.96e-09,3;CL:0000898,1.51e-08,3;CL:0000737,6.50e-07,4|ontology_enrichment_development_v019=CL:0002427;3.28e-23;1!CL:0002425;2.59e-12;2!CL:0000513;8.63e-09;3!UBERON:0005062;8.61e-07;4!UBERON:0007284;8.61e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002134;3.28e-23;1!UBERON:0005208;3.28e-23;1!UBERON:0004145;3.28e-23;1!UBERON:0005946;3.28e-23;1!UBERON:0005965;3.28e-23;1!UBERON:0002078;3.28e-23;1!UBERON:0002081;2.59e-12;2!UBERON:0002133;2.59e-12;2!UBERON:0003978;1.21e-08;3!UBERON:0004151;1.21e-08;3!UBERON:0000946;1.21e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.28e-23,1;UBERON:0005208,3.28e-23,1;UBERON:0005946,3.28e-23,1;UBERON:0005965,3.28e-23,1;UBERON:0002078,3.28e-23,1;UBERON:0002081,2.59e-12,2;UBERON:0002133,2.59e-12,2;UBERON:0010227,2.59e-12,2;UBERON:0003408,8.84e-10,10;UBERON:0003978,1.21e-08,3;UBERON:0009751,1.21e-08,3;UBERON:0004151,1.21e-08,3;UBERON:0000946,1.21e-08,3;UBERON:0002523,1.21e-08,3;UBERON:0005983,1.21e-08,3;UBERON:0004145,1.21e-08,3;UBERON:0002165,1.21e-08,3;UBERON:0002062,1.21e-08,3;UBERON:0007280,1.21e-08,3|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0.390178042679635,0.164437904603676,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0,1.14966148080576,0,0,0,0,0,0.602300476311091,0.895906278080929,0,0,0,0.403213486449465,0.267440195783507,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.561803226808994,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.538168907066586,0,0,0.600182192168805,0.309157587715317,0,0,0,0.0974370051611986,0,0,0.484938170456436,0.710019185033229,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0,0.462145851343933,0,0.137836572484531,0,0.290033387828457,0,0,0,0,0.510450849978337,0,0,1.5740617341532,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0.245040215981032,0.371606350251437,0.28853842595289,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0.50787533340481,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,1.84296421259539,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.593042257361244,0.247127877893006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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:7223143..7223146,+ | |||
|id=chr7:7223143..7223146,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000895;3.28e-23;1!CL:0000746;8.63e-09;3!CL:0002623;8.63e-09;3!CL:0000898;1.21e-08;3!CL:0000737;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,6.40e-23,1;CL:0000895,6.40e-23,1;CL:0002436,6.40e-23,1;CL:0002427,6.40e-23,1;CL:0002428,6.40e-23,1;CL:0002429,6.40e-23,1;CL:0002433,6.40e-23,1;CL:0002431,6.40e-23,1;CL:0002432,6.40e-23,1;CL:0000893,3.62e-12,2;CL:0002489,3.62e-12,2;CL:0000809,3.62e-12,2;CL:0000808,3.62e-12,2;CL:0000894,3.62e-12,2;CL:0000806,3.62e-12,2;CL:0000807,3.62e-12,2;CL:0000805,3.62e-12,2;CL:0002425,3.62e-12,2;CL:0000746,8.31e-09,3;CL:0000513,8.31e-09,3;CL:0002623,8.96e-09,3;CL:0000898,1.51e-08,3;CL:0000737,6.50e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002427;3.28e-23;1!CL:0002425;2.59e-12;2!CL:0000513;8.63e-09;3!UBERON:0005062;8.61e-07;4!UBERON:0007284;8.61e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.28e-23;1!UBERON:0005208;3.28e-23;1!UBERON:0004145;3.28e-23;1!UBERON:0005946;3.28e-23;1!UBERON:0005965;3.28e-23;1!UBERON:0002078;3.28e-23;1!UBERON:0002081;2.59e-12;2!UBERON:0002133;2.59e-12;2!UBERON:0003978;1.21e-08;3!UBERON:0004151;1.21e-08;3!UBERON:0000946;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.28e-23,1;UBERON:0005208,3.28e-23,1;UBERON:0005946,3.28e-23,1;UBERON:0005965,3.28e-23,1;UBERON:0002078,3.28e-23,1;UBERON:0002081,2.59e-12,2;UBERON:0002133,2.59e-12,2;UBERON:0010227,2.59e-12,2;UBERON:0003408,8.84e-10,10;UBERON:0003978,1.21e-08,3;UBERON:0009751,1.21e-08,3;UBERON:0004151,1.21e-08,3;UBERON:0000946,1.21e-08,3;UBERON:0002523,1.21e-08,3;UBERON:0005983,1.21e-08,3;UBERON:0004145,1.21e-08,3;UBERON:0002165,1.21e-08,3;UBERON:0002062,1.21e-08,3;UBERON:0007280,1.21e-08,3 | |||
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|short_description=p@chr7:7223143..7223146,+ | |||
}} |
Revision as of 01:52, 14 September 2013
Short description: | p@chr7:7223143..7223146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:7223143..7223146, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 6.40e-23 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.40e-23 | 1 |
mature CD4 single-positive thymocyte | 6.40e-23 | 1 |
resting double-positive thymocyte | 6.40e-23 | 1 |
double-positive blast | 6.40e-23 | 1 |
CD69-positive double-positive thymocyte | 6.40e-23 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.40e-23 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.40e-23 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.40e-23 | 1 |
thymocyte | 3.62e-12 | 2 |
double negative thymocyte | 3.62e-12 | 2 |
double-positive, alpha-beta thymocyte | 3.62e-12 | 2 |
DN4 thymocyte | 3.62e-12 | 2 |
DN1 thymic pro-T cell | 3.62e-12 | 2 |
DN2 thymocyte | 3.62e-12 | 2 |
DN3 thymocyte | 3.62e-12 | 2 |
immature single positive thymocyte | 3.62e-12 | 2 |
early T lineage precursor | 3.62e-12 | 2 |
cardiac muscle cell | 8.31e-09 | 3 |
cardiac muscle myoblast | 8.31e-09 | 3 |
acinar cell of salivary gland | 8.96e-09 | 3 |
naive T cell | 1.51e-08 | 3 |
striated muscle cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.28e-23 | 1 |
right atrium valve | 3.28e-23 | 1 |
outflow tract of atrium | 3.28e-23 | 1 |
outflow part of right atrium | 3.28e-23 | 1 |
right cardiac atrium | 3.28e-23 | 1 |
cardiac atrium | 2.59e-12 | 2 |
atrioventricular valve | 2.59e-12 | 2 |
future cardiac atrium | 2.59e-12 | 2 |
gland of gut | 8.84e-10 | 10 |
valve | 1.21e-08 | 3 |
cardiac mesenchyme | 1.21e-08 | 3 |
cardiac chamber | 1.21e-08 | 3 |
cardial valve | 1.21e-08 | 3 |
tunica intima | 1.21e-08 | 3 |
heart layer | 1.21e-08 | 3 |
outflow tract | 1.21e-08 | 3 |
endocardium | 1.21e-08 | 3 |
endocardial cushion | 1.21e-08 | 3 |
presumptive endocardium | 1.21e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.