FFCP PHASE1:Mm9::chr4:118298128..118298130,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:118298128..118298130,+|id=chr4:118298128..118298130,+|ontology_enrichment_celltype=CL:0000034!8.53e-08!97;CL:0000548!7.13e-07!115;CL:0000004!7.13e-07!115;CL:0000255!7.13e-07!115;CL:0000144!7.16e-07!121;CL:0000012!7.16e-07!121;CL:0002371!7.45e-07!118|ontology_enrichment_celltype_v019_2=CL:0000068,6.49e-25,3;CL:0002202,6.49e-25,3;CL:0000069,6.49e-25,3;CL:0002632,6.49e-25,3;CL:0002368,6.49e-25,3;CL:0000307,6.49e-25,3;CL:0000377,6.49e-25,3;CL:0002494,2.23e-11,3;CL:0000737,2.23e-11,3;CL:0000746,2.23e-11,3;CL:0000513,2.23e-11,3;CL:0000223,9.99e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.49e-25,3;UBERON:0001005,6.49e-25,3;UBERON:0007196,6.49e-25,3;UBERON:0001558,6.49e-25,3|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.129123323441576,0.422366166455,0.936258105287974,1.02730780935303,0.8774937489487,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,1.97773272513395,0,0,0,0.311068836925433,0.540023753326763,0.420649922702764,0,0.220868540951614,0,0.191690942036473,0,0,0.383062014255563,0.153606533256243,0,0.457438218012048,0.52091337055676,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.711858403995515,0.186399445825301,0.530083353332288,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,1.73192832808971,1.26679932737549,1.51657333504435,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,4.52373851817817,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0,0,0,0,0.552799895217695,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.384847366561318,0,0,0.443971906748129,0.807424709485281,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,1.71868654031819,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr4:118298128..118298130,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:118298128..118298130,+ | |||
|id=chr4:118298128..118298130,+ | |||
|ontology_enrichment_celltype=CL:0000034!8.53e-08!97;CL:0000548!7.13e-07!115;CL:0000004!7.13e-07!115;CL:0000255!7.13e-07!115;CL:0000144!7.16e-07!121;CL:0000012!7.16e-07!121;CL:0002371!7.45e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.49e-25,3;CL:0002202,6.49e-25,3;CL:0000069,6.49e-25,3;CL:0002632,6.49e-25,3;CL:0002368,6.49e-25,3;CL:0000307,6.49e-25,3;CL:0000377,6.49e-25,3;CL:0002494,2.23e-11,3;CL:0000737,2.23e-11,3;CL:0000746,2.23e-11,3;CL:0000513,2.23e-11,3;CL:0000223,9.99e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.49e-25,3;UBERON:0001005,6.49e-25,3;UBERON:0007196,6.49e-25,3;UBERON:0001558,6.49e-25,3 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0.129123323441576,0.422366166455,0.936258105287974,1.02730780935303,0.8774937489487,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,1.14613375975503,1.03134418455488,0,0,0,0,0,0,1.97773272513395,0,0,0,0.311068836925433,0.540023753326763,0.420649922702764,0,0.220868540951614,0,0.191690942036473,0,0,0.383062014255563,0.153606533256243,0,0.457438218012048,0.52091337055676,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.711858403995515,0.186399445825301,0.530083353332288,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,1.73192832808971,1.26679932737549,1.51657333504435,0,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,4.52373851817817,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0,0,0,0,0.552799895217695,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0.966336483304024,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.384847366561318,0,0,0.443971906748129,0.807424709485281,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,1.71868654031819,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr4:118298128..118298130,+ | |||
}} |
Revision as of 03:35, 14 September 2013
Short description: | p@chr4:118298128..118298130, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:118298128..118298130, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.49e-25 | 3 |
epithelial cell of tracheobronchial tree | 6.49e-25 | 3 |
branched duct epithelial cell | 6.49e-25 | 3 |
epithelial cell of lower respiratory tract | 6.49e-25 | 3 |
respiratory epithelial cell | 6.49e-25 | 3 |
tracheal epithelial cell | 6.49e-25 | 3 |
tracheoblast | 6.49e-25 | 3 |
cardiocyte | 2.23e-11 | 3 |
striated muscle cell | 2.23e-11 | 3 |
cardiac muscle cell | 2.23e-11 | 3 |
cardiac muscle myoblast | 2.23e-11 | 3 |
endodermal cell | 9.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.49e-25 | 3 |
respiratory airway | 6.49e-25 | 3 |
tracheobronchial tree | 6.49e-25 | 3 |
lower respiratory tract | 6.49e-25 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.