FFCP PHASE1:Mm9::chr4:126433792..126433824,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:126433792..126433824,+|id=chr4:126433792..126433824,+|ontology_enrichment_celltype=CL:0002563!1.05e-11!9;CL:0002251!1.05e-11!9;CL:0000075!2.40e-09!7;CL:0000239!5.68e-09!6;CL:0000677!5.68e-09!6;CL:0000212!5.68e-09!6;CL:0000584!5.68e-09!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.47e-20,9;CL:0002251,2.47e-20,9;CL:0000239,2.84e-15,6;CL:0000677,2.84e-15,6;CL:0000584,2.84e-15,6;CL:0000075,5.64e-13,7;CL:0000066,1.29e-11,25;CL:0002076,1.68e-11,15;CL:0000682,2.59e-08,3;CL:0000223,3.36e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.57e-20!43;UBERON:0005409!2.37e-19!59;UBERON:0000344!9.39e-19!15;UBERON:0001242!3.14e-16!13;UBERON:0000060!3.14e-16!13;UBERON:0001262!3.14e-16!13;UBERON:0004786!3.14e-16!13;UBERON:0003350!1.05e-11!9;UBERON:0004808!1.05e-11!9;UBERON:0001277!1.05e-11!9;UBERON:0000485!9.51e-11!11;UBERON:0004923!7.52e-10!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.45e-50,31;UBERON:0000344,1.98e-33,15;UBERON:0005409,3.29e-31,47;UBERON:0001242,9.78e-29,13;UBERON:0001262,9.78e-29,13;UBERON:0004786,9.78e-29,13;UBERON:0003350,2.47e-20,9;UBERON:0004808,2.47e-20,9;UBERON:0001277,2.47e-20,9;UBERON:0004923,1.55e-19,24;UBERON:0000485,2.56e-16,11;UBERON:0001007,5.22e-12,116;UBERON:0001555,5.22e-12,116;UBERON:0007026,5.22e-12,116;UBERON:0004119,1.09e-11,118;UBERON:0000925,1.09e-11,118;UBERON:0006595,1.09e-11,118;UBERON:0004921,4.41e-10,114;UBERON:0002108,1.10e-09,4;UBERON:0000331,1.71e-07,3;UBERON:0002116,1.71e-07,3;UBERON:0001204,1.71e-07,3;UBERON:0001168,1.71e-07,3|phase1_expression=0,77.4725404959382,71.8898798235467,75.0111244040938,68.6227150026496,13.9339795686869,16.5864974822823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,46.2378101872945,40.8348520299563,44.7900932009716,28.861053742658,41.5859479083766,13.6816862008589,21.4225610295941,10.199603490144,0,0,0,2.02196133825892,1.99481574430191,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,37.2967300604543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.7533378137758,56.3279706993349,0,0,0.38660238396628,2.62188582010345,6.89371935919098,9.13083005340284,30.8443890003933,22.2343588877415,11.0587491872119,11.7384318504279,7.79856348476481,26.0657628509724,27.2333942842115,24.2952353370328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7642271844397,0,0.161464426695906,0,0,0,33.228815375803,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,79.7499645416228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0,0.377252682772152,0.655490552289177,0.256100609619477,0.516919220600519,0,0.347652977834566,0,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,1.08643291076689,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.578719832943424,0,0.233931608445408,2.57845264857958,0,0,0|short_description=p@chr4:126433792..126433824,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:126433792..126433824,+ | |||
|id=chr4:126433792..126433824,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.05e-11!9;CL:0002251!1.05e-11!9;CL:0000075!2.40e-09!7;CL:0000239!5.68e-09!6;CL:0000677!5.68e-09!6;CL:0000212!5.68e-09!6;CL:0000584!5.68e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.47e-20,9;CL:0002251,2.47e-20,9;CL:0000239,2.84e-15,6;CL:0000677,2.84e-15,6;CL:0000584,2.84e-15,6;CL:0000075,5.64e-13,7;CL:0000066,1.29e-11,25;CL:0002076,1.68e-11,15;CL:0000682,2.59e-08,3;CL:0000223,3.36e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.57e-20!43;UBERON:0005409!2.37e-19!59;UBERON:0000344!9.39e-19!15;UBERON:0001242!3.14e-16!13;UBERON:0000060!3.14e-16!13;UBERON:0001262!3.14e-16!13;UBERON:0004786!3.14e-16!13;UBERON:0003350!1.05e-11!9;UBERON:0004808!1.05e-11!9;UBERON:0001277!1.05e-11!9;UBERON:0000485!9.51e-11!11;UBERON:0004923!7.52e-10!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.45e-50,31;UBERON:0000344,1.98e-33,15;UBERON:0005409,3.29e-31,47;UBERON:0001242,9.78e-29,13;UBERON:0001262,9.78e-29,13;UBERON:0004786,9.78e-29,13;UBERON:0003350,2.47e-20,9;UBERON:0004808,2.47e-20,9;UBERON:0001277,2.47e-20,9;UBERON:0004923,1.55e-19,24;UBERON:0000485,2.56e-16,11;UBERON:0001007,5.22e-12,116;UBERON:0001555,5.22e-12,116;UBERON:0007026,5.22e-12,116;UBERON:0004119,1.09e-11,118;UBERON:0000925,1.09e-11,118;UBERON:0006595,1.09e-11,118;UBERON:0004921,4.41e-10,114;UBERON:0002108,1.10e-09,4;UBERON:0000331,1.71e-07,3;UBERON:0002116,1.71e-07,3;UBERON:0001204,1.71e-07,3;UBERON:0001168,1.71e-07,3 | |||
|phase1_expression=0,77.4725404959382,71.8898798235467,75.0111244040938,68.6227150026496,13.9339795686869,16.5864974822823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,46.2378101872945,40.8348520299563,44.7900932009716,28.861053742658,41.5859479083766,13.6816862008589,21.4225610295941,10.199603490144,0,0,0,2.02196133825892,1.99481574430191,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,37.2967300604543,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.7533378137758,56.3279706993349,0,0,0.38660238396628,2.62188582010345,6.89371935919098,9.13083005340284,30.8443890003933,22.2343588877415,11.0587491872119,11.7384318504279,7.79856348476481,26.0657628509724,27.2333942842115,24.2952353370328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7642271844397,0,0.161464426695906,0,0,0,33.228815375803,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.418176592028937,0.87345025498471,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,79.7499645416228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0,0.377252682772152,0.655490552289177,0.256100609619477,0.516919220600519,0,0.347652977834566,0,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,1.08643291076689,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.578719832943424,0,0.233931608445408,2.57845264857958,0,0,0 | |||
|short_description=p@chr4:126433792..126433824,+ | |||
}} |
Revision as of 03:47, 14 September 2013
Short description: | p@chr4:126433792..126433824, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:126433792..126433824, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.47e-20 | 9 |
epithelial cell of alimentary canal | 2.47e-20 | 9 |
brush border epithelial cell | 2.84e-15 | 6 |
gut absorptive cell | 2.84e-15 | 6 |
enterocyte | 2.84e-15 | 6 |
columnar/cuboidal epithelial cell | 5.64e-13 | 7 |
epithelial cell | 1.29e-11 | 25 |
endo-epithelial cell | 1.68e-11 | 15 |
M cell of gut | 2.59e-08 | 3 |
endodermal cell | 3.36e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.45e-50 | 31 |
mucosa | 1.98e-33 | 15 |
gastrointestinal system | 3.29e-31 | 47 |
intestinal mucosa | 9.78e-29 | 13 |
wall of intestine | 9.78e-29 | 13 |
gastrointestinal system mucosa | 9.78e-29 | 13 |
epithelium of mucosa | 2.47e-20 | 9 |
gastrointestinal system epithelium | 2.47e-20 | 9 |
intestinal epithelium | 2.47e-20 | 9 |
organ component layer | 1.55e-19 | 24 |
simple columnar epithelium | 2.56e-16 | 11 |
digestive system | 5.22e-12 | 116 |
digestive tract | 5.22e-12 | 116 |
primitive gut | 5.22e-12 | 116 |
endoderm-derived structure | 1.09e-11 | 118 |
endoderm | 1.09e-11 | 118 |
presumptive endoderm | 1.09e-11 | 118 |
subdivision of digestive tract | 4.41e-10 | 114 |
small intestine | 1.10e-09 | 4 |
ileal mucosa | 1.71e-07 | 3 |
ileum | 1.71e-07 | 3 |
mucosa of small intestine | 1.71e-07 | 3 |
wall of small intestine | 1.71e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.