FFCP PHASE1:Hg19::chr8:137528369..137528387,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C74|description=CAGE_peak_at_chr8:137528369..137528387,+|id=chr8:137528369..137528387,+|ontology_enrichment_celltype=CL:0000242!1.37e-16!2;CL:0000945!1.96e-14!24;CL:0000826!1.96e-14!24;CL:0000946!3.31e-09!1;CL:0000786!3.31e-09!1;CL:0000980!3.31e-09!1;CL:0000312!3.77e-07!5|ontology_enrichment_celltype_v019=CL:0000123;3.58e-57;2!CL:0000242;3.58e-57;2!CL:0000946;9.99e-30;1!CL:0000786;9.99e-30;1!CL:0000312;1.28e-23;5!CL:0000240;7.13e-20;6!CL:0000311;7.13e-20;6!CL:0000079;7.13e-20;6!CL:0000237;7.13e-20;6!CL:0000362;1.31e-13;9!CL:0002159;4.21e-09;14!CL:0000095;6.01e-07;17|ontology_enrichment_celltype_v019_2=CL:0000242,3.58e-57,2;CL:0000946,9.99e-30,1;CL:0000786,9.99e-30,1;CL:0000980,9.99e-30,1;CL:0000312,1.28e-23,5;CL:0000240,7.13e-20,6;CL:0000311,7.13e-20,6;CL:0000079,7.13e-20,6;CL:0000237,7.13e-20,6;CL:0000036,7.13e-20,6;CL:0000357,7.13e-20,6;CL:0000114,7.13e-20,6;CL:0000785,1.33e-15,2;CL:0000955,1.33e-15,2;CL:0000818,1.33e-15,2;CL:0000954,1.33e-15,2;CL:0000816,1.33e-15,2;CL:0000362,1.31e-13,9;CL:0000817,7.42e-11,3;CL:0002159,4.21e-09,14;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17|ontology_enrichment_development_v019=CL:0000357;7.13e-20;6!CL:0000114;7.13e-20;6!CL:0000954;1.33e-15;2|ontology_enrichment_disease=DOID:630!4.19e-09!1;DOID:0050177!4.19e-09!1;DOID:0050427!4.19e-09!1;DOID:2355!1.53e-08!1|ontology_enrichment_disease_v019=DOID:630;2.37e-29;1!DOID:0050177;2.37e-29;1!DOID:0050427;2.37e-29;1|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1|ontology_enrichment_uberon=UBERON:0001869!4.95e-35!32;UBERON:0001950!2.88e-33!20;UBERON:0001893!6.72e-33!34;UBERON:0002619!3.06e-30!22;UBERON:0002791!8.69e-29!33;UBERON:0002020!6.61e-28!34;UBERON:0003528!6.61e-28!34;UBERON:0002780!4.95e-27!41;UBERON:0001890!4.95e-27!41;UBERON:0006240!4.95e-27!41;UBERON:0000956!1.43e-26!25;UBERON:0000203!1.43e-26!25;UBERON:0003080!2.38e-26!42;UBERON:0000200!8.68e-20!6;UBERON:0001049!6.23e-19!57;UBERON:0005068!6.23e-19!57;UBERON:0006241!6.23e-19!57;UBERON:0007135!6.23e-19!57;UBERON:0002616!3.19e-18!59;UBERON:0000955!1.45e-17!69;UBERON:0006238!1.45e-17!69;UBERON:0003056!1.47e-17!61;UBERON:0001017!8.69e-17!82;UBERON:0005743!6.74e-16!86;UBERON:0000073!3.65e-14!94;UBERON:0001016!3.65e-14!94;UBERON:0002021!4.57e-14!5;UBERON:0001872!5.23e-14!5;UBERON:0003075!6.61e-14!86;UBERON:0007284!6.61e-14!86;UBERON:0007023!2.62e-13!115;UBERON:0002346!3.51e-13!90;UBERON:0002771!1.32e-10!3;UBERON:0000033!2.27e-10!123;UBERON:0000153!9.07e-10!129;UBERON:0007811!9.07e-10!129;UBERON:0004121!3.49e-09!169;UBERON:0003112!6.65e-09!1;UBERON:0000032!6.65e-09!1;UBERON:0005253!6.65e-09!1;UBERON:0003128!6.65e-09!1;UBERON:0002241!6.65e-09!1;UBERON:0001703!6.65e-09!1;UBERON:0004761!6.65e-09!1;UBERON:0009617!6.65e-09!1;UBERON:0000924!6.66e-09!173;UBERON:0006601!6.66e-09!173;UBERON:0002581!7.75e-09!1;UBERON:0007190!9.02e-09!1;UBERON:0001882!9.74e-09!1;UBERON:0005403!9.74e-09!1;UBERON:0002022!1.13e-08!1;UBERON:0002902!1.78e-08!1;UBERON:0009899!1.78e-08!1;UBERON:0000369!3.72e-08!4;UBERON:0002435!3.72e-08!4;UBERON:0000204!3.72e-08!4;UBERON:0010082!3.72e-08!4|ontology_enrichment_uberon_v019=UBERON:0002106;6.73e-11;3!UBERON:0001003;1.47e-08;15!UBERON:0007376;1.47e-08;15!UBERON:0004177;4.79e-07;5!UBERON:0005057;4.79e-07;5!UBERON:0002021;6.58e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0002021,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr8:137528369..137528387,+ | |||
|id=chr8:137528369..137528387,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.37e-16!2;CL:0000945!1.96e-14!24;CL:0000826!1.96e-14!24;CL:0000946!3.31e-09!1;CL:0000786!3.31e-09!1;CL:0000980!3.31e-09!1;CL:0000312!3.77e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.58e-57;2!CL:0000242;3.58e-57;2!CL:0000946;9.99e-30;1!CL:0000786;9.99e-30;1!CL:0000312;1.28e-23;5!CL:0000240;7.13e-20;6!CL:0000311;7.13e-20;6!CL:0000079;7.13e-20;6!CL:0000237;7.13e-20;6!CL:0000362;1.31e-13;9!CL:0002159;4.21e-09;14!CL:0000095;6.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.58e-57,2;CL:0000946,9.99e-30,1;CL:0000786,9.99e-30,1;CL:0000980,9.99e-30,1;CL:0000312,1.28e-23,5;CL:0000240,7.13e-20,6;CL:0000311,7.13e-20,6;CL:0000079,7.13e-20,6;CL:0000237,7.13e-20,6;CL:0000036,7.13e-20,6;CL:0000357,7.13e-20,6;CL:0000114,7.13e-20,6;CL:0000785,1.33e-15,2;CL:0000955,1.33e-15,2;CL:0000818,1.33e-15,2;CL:0000954,1.33e-15,2;CL:0000816,1.33e-15,2;CL:0000362,1.31e-13,9;CL:0000817,7.42e-11,3;CL:0002159,4.21e-09,14;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000357;7.13e-20;6!CL:0000114;7.13e-20;6!CL:0000954;1.33e-15;2 | |||
|ontology_enrichment_disease=DOID:630!4.19e-09!1;DOID:0050177!4.19e-09!1;DOID:0050427!4.19e-09!1;DOID:2355!1.53e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.37e-29;1!DOID:0050177;2.37e-29;1!DOID:0050427;2.37e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.95e-35!32;UBERON:0001950!2.88e-33!20;UBERON:0001893!6.72e-33!34;UBERON:0002619!3.06e-30!22;UBERON:0002791!8.69e-29!33;UBERON:0002020!6.61e-28!34;UBERON:0003528!6.61e-28!34;UBERON:0002780!4.95e-27!41;UBERON:0001890!4.95e-27!41;UBERON:0006240!4.95e-27!41;UBERON:0000956!1.43e-26!25;UBERON:0000203!1.43e-26!25;UBERON:0003080!2.38e-26!42;UBERON:0000200!8.68e-20!6;UBERON:0001049!6.23e-19!57;UBERON:0005068!6.23e-19!57;UBERON:0006241!6.23e-19!57;UBERON:0007135!6.23e-19!57;UBERON:0002616!3.19e-18!59;UBERON:0000955!1.45e-17!69;UBERON:0006238!1.45e-17!69;UBERON:0003056!1.47e-17!61;UBERON:0001017!8.69e-17!82;UBERON:0005743!6.74e-16!86;UBERON:0000073!3.65e-14!94;UBERON:0001016!3.65e-14!94;UBERON:0002021!4.57e-14!5;UBERON:0001872!5.23e-14!5;UBERON:0003075!6.61e-14!86;UBERON:0007284!6.61e-14!86;UBERON:0007023!2.62e-13!115;UBERON:0002346!3.51e-13!90;UBERON:0002771!1.32e-10!3;UBERON:0000033!2.27e-10!123;UBERON:0000153!9.07e-10!129;UBERON:0007811!9.07e-10!129;UBERON:0004121!3.49e-09!169;UBERON:0003112!6.65e-09!1;UBERON:0000032!6.65e-09!1;UBERON:0005253!6.65e-09!1;UBERON:0003128!6.65e-09!1;UBERON:0002241!6.65e-09!1;UBERON:0001703!6.65e-09!1;UBERON:0004761!6.65e-09!1;UBERON:0009617!6.65e-09!1;UBERON:0000924!6.66e-09!173;UBERON:0006601!6.66e-09!173;UBERON:0002581!7.75e-09!1;UBERON:0007190!9.02e-09!1;UBERON:0001882!9.74e-09!1;UBERON:0005403!9.74e-09!1;UBERON:0002022!1.13e-08!1;UBERON:0002902!1.78e-08!1;UBERON:0009899!1.78e-08!1;UBERON:0000369!3.72e-08!4;UBERON:0002435!3.72e-08!4;UBERON:0000204!3.72e-08!4;UBERON:0010082!3.72e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.73e-11;3!UBERON:0001003;1.47e-08;15!UBERON:0007376;1.47e-08;15!UBERON:0004177;4.79e-07;5!UBERON:0005057;4.79e-07;5!UBERON:0002021;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0002021,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.72371686620732,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,5.1516839638757,7.68081451637373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0.615349092722265,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.507326481551255,0,0,0,0,0,0,0,0,0,0,10.8319948302433,0,0,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6825233097039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | |||
|short_description=p@chr8:137528369..137528387,+ | |||
}} |
Revision as of 03:57, 14 September 2013
Short description: | p@chr8:137528369..137528387, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:137528369..137528387, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.58e-57 | 2 |
antibody secreting cell | 9.99e-30 | 1 |
plasma cell | 9.99e-30 | 1 |
plasmablast | 9.99e-30 | 1 |
keratinocyte | 1.28e-23 | 5 |
stratified squamous epithelial cell | 7.13e-20 | 6 |
keratin accumulating cell | 7.13e-20 | 6 |
stratified epithelial cell | 7.13e-20 | 6 |
keratinizing barrier epithelial cell | 7.13e-20 | 6 |
epithelial fate stem cell | 7.13e-20 | 6 |
stratified epithelial stem cell | 7.13e-20 | 6 |
surface ectodermal cell | 7.13e-20 | 6 |
mature B cell | 1.33e-15 | 2 |
pre-B-II cell | 1.33e-15 | 2 |
transitional stage B cell | 1.33e-15 | 2 |
small pre-B-II cell | 1.33e-15 | 2 |
immature B cell | 1.33e-15 | 2 |
epidermal cell | 1.31e-13 | 9 |
precursor B cell | 7.42e-11 | 3 |
general ecto-epithelial cell | 4.21e-09 | 14 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
occipital lobe | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.