FFCP PHASE1:Mm9::chr4:153733851..153733868,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:153733851..153733868,-|id=chr4:153733851..153733868,-|ontology_enrichment_celltype=CL:0002563!5.37e-18!9;CL:0002251!5.37e-18!9;CL:0000239!7.86e-13!6;CL:0000677!7.86e-13!6;CL:0000212!7.86e-13!6;CL:0000584!7.86e-13!6;CL:0000075!7.29e-11!7;CL:0002076!5.38e-10!15;CL:0000066!1.15e-09!25;CL:0000223!5.10e-07!20;CL:0000473!6.47e-07!3;CL:0000627!6.47e-07!3;CL:0000682!6.47e-07!3;CL:0002250!9.70e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,1.23e-24,9;CL:0002251,1.23e-24,9;CL:0000239,9.97e-20,6;CL:0000677,9.97e-20,6;CL:0000584,9.97e-20,6;CL:0000075,6.72e-17,7;CL:0002076,1.59e-14,15;CL:0000066,6.69e-14,25;CL:0000223,1.02e-10,20;CL:0000682,3.62e-07,3;CL:0002250,8.37e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.21e-22!43;UBERON:0005409!4.77e-19!59;UBERON:0000344!2.45e-18!15;UBERON:0003350!5.37e-18!9;UBERON:0004808!5.37e-18!9;UBERON:0001277!5.37e-18!9;UBERON:0001242!6.76e-15!13;UBERON:0000060!6.76e-15!13;UBERON:0001262!6.76e-15!13;UBERON:0004786!6.76e-15!13;UBERON:0000485!2.35e-14!11;UBERON:0004923!2.51e-10!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.86e-32,31;UBERON:0003350,1.23e-24,9;UBERON:0004808,1.23e-24,9;UBERON:0001277,1.23e-24,9;UBERON:0000344,3.18e-24,15;UBERON:0001242,3.09e-22,13;UBERON:0001262,3.09e-22,13;UBERON:0004786,3.09e-22,13;UBERON:0005409,2.20e-20,47;UBERON:0000485,4.79e-20,11;UBERON:0004923,1.07e-14,24;UBERON:0001007,5.13e-08,116;UBERON:0001555,5.13e-08,116;UBERON:0007026,5.13e-08,116;UBERON:0004119,7.76e-08,118;UBERON:0000925,7.76e-08,118;UBERON:0006595,7.76e-08,118;UBERON:0004921,5.21e-07,114|phase1_expression=0,1.04692622291808,3.63999391511629,7.56160528267075,6.01074875935617,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.91763712426868,2.29692785646008,0.430761996159075,1.50829862880122,0,0,0,0,0,0,1.1554064790051,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7814087237848,0.264450566663544,0,0,0.38660238396628,0,1.55664630691409,0.570676878337677,1.42358718463353,2.14108641141214,1.75934646160189,0.397912944082302,0.974820435595601,2.69645822596266,0,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr4:153733851..153733868,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:153733851..153733868,- | |||
|id=chr4:153733851..153733868,- | |||
|ontology_enrichment_celltype=CL:0002563!5.37e-18!9;CL:0002251!5.37e-18!9;CL:0000239!7.86e-13!6;CL:0000677!7.86e-13!6;CL:0000212!7.86e-13!6;CL:0000584!7.86e-13!6;CL:0000075!7.29e-11!7;CL:0002076!5.38e-10!15;CL:0000066!1.15e-09!25;CL:0000223!5.10e-07!20;CL:0000473!6.47e-07!3;CL:0000627!6.47e-07!3;CL:0000682!6.47e-07!3;CL:0002250!9.70e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.23e-24,9;CL:0002251,1.23e-24,9;CL:0000239,9.97e-20,6;CL:0000677,9.97e-20,6;CL:0000584,9.97e-20,6;CL:0000075,6.72e-17,7;CL:0002076,1.59e-14,15;CL:0000066,6.69e-14,25;CL:0000223,1.02e-10,20;CL:0000682,3.62e-07,3;CL:0002250,8.37e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.21e-22!43;UBERON:0005409!4.77e-19!59;UBERON:0000344!2.45e-18!15;UBERON:0003350!5.37e-18!9;UBERON:0004808!5.37e-18!9;UBERON:0001277!5.37e-18!9;UBERON:0001242!6.76e-15!13;UBERON:0000060!6.76e-15!13;UBERON:0001262!6.76e-15!13;UBERON:0004786!6.76e-15!13;UBERON:0000485!2.35e-14!11;UBERON:0004923!2.51e-10!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.86e-32,31;UBERON:0003350,1.23e-24,9;UBERON:0004808,1.23e-24,9;UBERON:0001277,1.23e-24,9;UBERON:0000344,3.18e-24,15;UBERON:0001242,3.09e-22,13;UBERON:0001262,3.09e-22,13;UBERON:0004786,3.09e-22,13;UBERON:0005409,2.20e-20,47;UBERON:0000485,4.79e-20,11;UBERON:0004923,1.07e-14,24;UBERON:0001007,5.13e-08,116;UBERON:0001555,5.13e-08,116;UBERON:0007026,5.13e-08,116;UBERON:0004119,7.76e-08,118;UBERON:0000925,7.76e-08,118;UBERON:0006595,7.76e-08,118;UBERON:0004921,5.21e-07,114 | |||
|phase1_expression=0,1.04692622291808,3.63999391511629,7.56160528267075,6.01074875935617,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,0.91763712426868,2.29692785646008,0.430761996159075,1.50829862880122,0,0,0,0,0,0,1.1554064790051,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7814087237848,0.264450566663544,0,0,0.38660238396628,0,1.55664630691409,0.570676878337677,1.42358718463353,2.14108641141214,1.75934646160189,0.397912944082302,0.974820435595601,2.69645822596266,0,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:153733851..153733868,- | |||
}} |
Revision as of 04:37, 14 September 2013
Short description: | p@chr4:153733851..153733868, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:153733851..153733868, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.23e-24 | 9 |
epithelial cell of alimentary canal | 1.23e-24 | 9 |
brush border epithelial cell | 9.97e-20 | 6 |
gut absorptive cell | 9.97e-20 | 6 |
enterocyte | 9.97e-20 | 6 |
columnar/cuboidal epithelial cell | 6.72e-17 | 7 |
endo-epithelial cell | 1.59e-14 | 15 |
epithelial cell | 6.69e-14 | 25 |
endodermal cell | 1.02e-10 | 20 |
M cell of gut | 3.62e-07 | 3 |
intestinal crypt stem cell | 8.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.86e-32 | 31 |
epithelium of mucosa | 1.23e-24 | 9 |
gastrointestinal system epithelium | 1.23e-24 | 9 |
intestinal epithelium | 1.23e-24 | 9 |
mucosa | 3.18e-24 | 15 |
intestinal mucosa | 3.09e-22 | 13 |
wall of intestine | 3.09e-22 | 13 |
gastrointestinal system mucosa | 3.09e-22 | 13 |
gastrointestinal system | 2.20e-20 | 47 |
simple columnar epithelium | 4.79e-20 | 11 |
organ component layer | 1.07e-14 | 24 |
digestive system | 5.13e-08 | 116 |
digestive tract | 5.13e-08 | 116 |
primitive gut | 5.13e-08 | 116 |
endoderm-derived structure | 7.76e-08 | 118 |
endoderm | 7.76e-08 | 118 |
presumptive endoderm | 7.76e-08 | 118 |
subdivision of digestive tract | 5.21e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.