FFCP PHASE1:Mm9::chr4:154933881..154933917,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2401|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:154933881..154933917,+|id=chr4:154933881..154933917,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.14e-08,9|ontology_enrichment_disease=DOID:0060100!1.49e-07!3;DOID:4045!1.49e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,7.05e-24,3;DOID:4045,7.05e-24,3;DOID:0050686,2.71e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.14e-08,9;UBERON:0002036,2.14e-08,9;UBERON:0002385,2.14e-08,9;UBERON:0000486,2.14e-08,9;UBERON:0007503,2.14e-08,9;UBERON:0001015,2.14e-08,9;UBERON:0002329,2.14e-08,9;UBERON:0003082,2.14e-08,9;UBERON:0003059,2.14e-08,9;UBERON:0007282,2.14e-08,9;UBERON:0004290,2.14e-08,9;UBERON:0009618,2.14e-08,9;UBERON:0000383,1.30e-07,10;UBERON:0007524,5.74e-07,11;UBERON:0003077,5.74e-07,11;UBERON:0007285,5.74e-07,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,1.57057123192139,2.35292595212406,3.41522742479223,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,2.63593273913025,1.79970819298022,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,5.77926661979108,6.15786390224095,3.17859939750175,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:154933881..154933917,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2401 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:154933881..154933917,+ | |||
|id=chr4:154933881..154933917,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.14e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.49e-07!3;DOID:4045!1.49e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.05e-24,3;DOID:4045,7.05e-24,3;DOID:0050686,2.71e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.14e-08,9;UBERON:0002036,2.14e-08,9;UBERON:0002385,2.14e-08,9;UBERON:0000486,2.14e-08,9;UBERON:0007503,2.14e-08,9;UBERON:0001015,2.14e-08,9;UBERON:0002329,2.14e-08,9;UBERON:0003082,2.14e-08,9;UBERON:0003059,2.14e-08,9;UBERON:0007282,2.14e-08,9;UBERON:0004290,2.14e-08,9;UBERON:0009618,2.14e-08,9;UBERON:0000383,1.30e-07,10;UBERON:0007524,5.74e-07,11;UBERON:0003077,5.74e-07,11;UBERON:0007285,5.74e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,1.5626706890476,1.57057123192139,2.35292595212406,3.41522742479223,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,2.63593273913025,1.79970819298022,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,5.77926661979108,6.15786390224095,3.17859939750175,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:154933881..154933917,+ | |||
}} |
Revision as of 04:41, 14 September 2013
Short description: | p@chr4:154933881..154933917, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:154933881..154933917, + |
Coexpression cluster: | MCL_coexpression_mm9:2401 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.14e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.14e-08 | 9 |
striated muscle tissue | 2.14e-08 | 9 |
muscle tissue | 2.14e-08 | 9 |
multilaminar epithelium | 2.14e-08 | 9 |
epithelial vesicle | 2.14e-08 | 9 |
musculature | 2.14e-08 | 9 |
somite | 2.14e-08 | 9 |
myotome | 2.14e-08 | 9 |
presomitic mesoderm | 2.14e-08 | 9 |
presumptive segmental plate | 2.14e-08 | 9 |
dermomyotome | 2.14e-08 | 9 |
trunk paraxial mesoderm | 2.14e-08 | 9 |
musculature of body | 1.30e-07 | 10 |
dense mesenchyme tissue | 5.74e-07 | 11 |
paraxial mesoderm | 5.74e-07 | 11 |
presumptive paraxial mesoderm | 5.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.05e-24 | 3 |
muscle cancer | 7.05e-24 | 3 |
organ system cancer | 2.71e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.