FFCP PHASE1:Mm9::chr4:40670117..40670137,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15502|HGNC=|UniProt=B1AXX9|association_with_transcript=-12bp_to_ENSMUST00000149794_5end|description=CAGE_peak_4_at_Dnaja1_5end|id=chr4:40670117..40670137,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.17e-07,23;UBERON:0000974,1.17e-07,23;UBERON:0004807,1.17e-07,23;UBERON:0005058,1.17e-07,23;UBERON:0003351,1.17e-07,23;UBERON:0009113,1.17e-07,23;UBERON:0003295,1.17e-07,23;UBERON:0009722,1.17e-07,23;UBERON:0005562,1.17e-07,23;UBERON:0007690,1.17e-07,23;UBERON:0000065,1.38e-07,41;UBERON:0001004,2.87e-07,42;UBERON:0006562,3.54e-07,24;UBERON:0003408,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0.422366166455,0.936258105287974,0,0,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0,0.274228867211478,0,1.87095238332354,0.794327609607082,1.30599894569468,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0.881277725829041,0.304130793658544,1.83546752161682,0,0.218025156380447,0,0.388859798148567,0.139986421625363,2.87505128729943,0.335565212115473,0.725362142011344,2.35265659399725,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.675029691658453,0.841299845405528,1.14260393761521,0.441737081903227,1.46988959057945,0.670918297127655,1.83843757322004,0,0.766124028511126,0.307213066512487,0.659431438650969,0.914876436024097,0,0.279182999001381,0,1.22238598221448,1.17851434189467,1.28134512719193,1.67759501242771,0,0.377857800533928,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.705532242814229,0.125666591329675,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0,0.41889341362691,0,1.31796636956512,0.599902730993408,0.762421362438388,0.149790639404823,0.457500602818626,2.01046963380583,0,0.511430914660661,0.41557608911912,0.486723789203273,1.2220723662038,0.995255764880744,0,0,0.910843100738926,2.5289231487682,1.0803727788321,0.90422890701429,1.42876648217788,1.0249097622788,0.749613796477831,0,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0.834141747676794,0.696504333044333,0.411564272815887,1.39323986772945,2.1066395619397,3.86021860672073,1.70498099637356,0.828503090142008,0.469052119962192,1.2604344302271,0.710234206755631,1.37734962223183,0.617068451549513,1.16266972375204,1.60964040839772,1.05088808130453,0.822799249567402,0.32833492815819,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0.841159794256509,1.64647379806855,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,0,0.193952487167626,0.280543279561274,0.885311519739602,0,0,0.246794327843601,0,0.667380422864376,0.786235980452812,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,1.32643988239339,0.488894929326078,0.339490171550376,1.17345124144251,1.00503754465089,1.6663054862021,0.975668239288994,2.20689201748667,1.32878813789265,1.75400245523236,0.81931657357869,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0.160550589987792,0.586058432961016,0.327869890753351,0.252470927204373,1.57754109708128,1.95219372148319,1.50796378412959,0,0.891194696329576,0,0.404810701674894,1.16902343164525,0,0.642642632843614,0.567760340833074,0.712262414669021,1.14020871547503,1.31976098378028,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.646793418913773,0.643011105094777,0.886701168211368,1.24858172321449,0.329098041204242,0.304464949114599,1.17335854031855,0.42366414172764,0,0,0.484393280087717,0.301564624640779,0,0,0,0,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.228778173206523,1.01987057996313,1.53946597556024,0.690999869022119,0,1.58167996790568,0.406638934253697,1.29606408986162,0.627264888043406,0.655087691238533,0.404593039154462,0.330613822901344,0,0,0,3.38215763210514,1.04661582230785,0.827292452285488,1.75006069509643,0.516639293910924,1.18269287843545,1.05621514781179,0.781226309063701,0.314578033277133,5.07326653734613,5.76060012515731,6.32022241256356,0.810900861160657,1.33524244314275,3.76770386635606,3.75956060901711,2.98022032171897,2.52410443991935,3.54454865218985,6.46185279668145,3.50551310612999,3.7305688500631,2.53390489923356,3.5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| ||
|EntrezGene=15502 | |||
|HGNC= | |||
|UniProt=B1AXX9 | |||
|association_with_transcript=-12bp_to_ENSMUST00000149794_5end | |||
|description=CAGE_peak_4_at_Dnaja1_5end | |||
|id=chr4:40670117..40670137,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.17e-07,23;UBERON:0000974,1.17e-07,23;UBERON:0004807,1.17e-07,23;UBERON:0005058,1.17e-07,23;UBERON:0003351,1.17e-07,23;UBERON:0009113,1.17e-07,23;UBERON:0003295,1.17e-07,23;UBERON:0009722,1.17e-07,23;UBERON:0005562,1.17e-07,23;UBERON:0007690,1.17e-07,23;UBERON:0000065,1.38e-07,41;UBERON:0001004,2.87e-07,42;UBERON:0006562,3.54e-07,24;UBERON:0003408,3.54e-07,24;UBERON:0001557,3.54e-07,24;UBERON:0001042,3.54e-07,24;UBERON:0008814,3.54e-07,24;UBERON:0009145,3.54e-07,24 | |||
|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0.422366166455,0.936258105287974,0,0,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0,0.274228867211478,0,1.87095238332354,0.794327609607082,1.30599894569468,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0.881277725829041,0.304130793658544,1.83546752161682,0,0.218025156380447,0,0.388859798148567,0.139986421625363,2.87505128729943,0.335565212115473,0.725362142011344,2.35265659399725,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.675029691658453,0.841299845405528,1.14260393761521,0.441737081903227,1.46988959057945,0.670918297127655,1.83843757322004,0,0.766124028511126,0.307213066512487,0.659431438650969,0.914876436024097,0,0.279182999001381,0,1.22238598221448,1.17851434189467,1.28134512719193,1.67759501242771,0,0.377857800533928,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.705532242814229,0.125666591329675,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0,0.41889341362691,0,1.31796636956512,0.599902730993408,0.762421362438388,0.149790639404823,0.457500602818626,2.01046963380583,0,0.511430914660661,0.41557608911912,0.486723789203273,1.2220723662038,0.995255764880744,0,0,0.910843100738926,2.5289231487682,1.0803727788321,0.90422890701429,1.42876648217788,1.0249097622788,0.749613796477831,0,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,0.834141747676794,0.696504333044333,0.411564272815887,1.39323986772945,2.1066395619397,3.86021860672073,1.70498099637356,0.828503090142008,0.469052119962192,1.2604344302271,0.710234206755631,1.37734962223183,0.617068451549513,1.16266972375204,1.60964040839772,1.05088808130453,0.822799249567402,0.32833492815819,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0.841159794256509,1.64647379806855,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0,0,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,0,0.193952487167626,0.280543279561274,0.885311519739602,0,0,0.246794327843601,0,0.667380422864376,0.786235980452812,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.369506380333209,1.32643988239339,0.488894929326078,0.339490171550376,1.17345124144251,1.00503754465089,1.6663054862021,0.975668239288994,2.20689201748667,1.32878813789265,1.75400245523236,0.81931657357869,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0.275936746304732,0.160550589987792,0.586058432961016,0.327869890753351,0.252470927204373,1.57754109708128,1.95219372148319,1.50796378412959,0,0.891194696329576,0,0.404810701674894,1.16902343164525,0,0.642642632843614,0.567760340833074,0.712262414669021,1.14020871547503,1.31976098378028,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0.340439605753788,1.08036656418786,0.646793418913773,0.643011105094777,0.886701168211368,1.24858172321449,0.329098041204242,0.304464949114599,1.17335854031855,0.42366414172764,0,0,0.484393280087717,0.301564624640779,0,0,0,0,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.228778173206523,1.01987057996313,1.53946597556024,0.690999869022119,0,1.58167996790568,0.406638934253697,1.29606408986162,0.627264888043406,0.655087691238533,0.404593039154462,0.330613822901344,0,0,0,3.38215763210514,1.04661582230785,0.827292452285488,1.75006069509643,0.516639293910924,1.18269287843545,1.05621514781179,0.781226309063701,0.314578033277133,5.07326653734613,5.76060012515731,6.32022241256356,0.810900861160657,1.33524244314275,3.76770386635606,3.75956060901711,2.98022032171897,2.52410443991935,3.54454865218985,6.46185279668145,3.50551310612999,3.7305688500631,2.53390489923356,3.55983814069219,2.33753804363138,0,0.665957860122194,0.448569283047378,0.839423081820392,0,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0.675022500231806,0.900642406448441,0,0.51776031175182,1.97195960409936,2.79317411380722,1.53660245178721,0.486213434136588,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,1.50901073108861,0.842773567228942,0.576226371643824,0.746661096422973,0.476293691283074,0.811190281613988,0.77163688185482,0,0.735994600671987,0,0.887379030796687,1.1921809497366,1.30811774969096,0.846984423737976,0.676916863133412,0.73171189149109,1.31534855718921,0.543216455383447,0.561142271657738,0.593175090620871,0.197008964751127,1.22769312950907,1.08455788830176,0.385813221962283,0.249810577937946,0.233931608445408,0.6446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| |||
|short_description=p4@Dnaja1 | |||
}} |
Revision as of 04:55, 14 September 2013
Short description: | p4@Dnaja1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dnaja1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENSMUST00000149794_5end |
EntrezGene: | Dnaja1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.17e-07 | 23 |
neck | 1.17e-07 | 23 |
respiratory system epithelium | 1.17e-07 | 23 |
hemolymphoid system gland | 1.17e-07 | 23 |
pharyngeal epithelium | 1.17e-07 | 23 |
thymic region | 1.17e-07 | 23 |
pharyngeal gland | 1.17e-07 | 23 |
entire pharyngeal arch endoderm | 1.17e-07 | 23 |
thymus primordium | 1.17e-07 | 23 |
early pharyngeal endoderm | 1.17e-07 | 23 |
respiratory tract | 1.38e-07 | 41 |
respiratory system | 2.87e-07 | 42 |
pharynx | 3.54e-07 | 24 |
gland of gut | 3.54e-07 | 24 |
upper respiratory tract | 3.54e-07 | 24 |
chordate pharynx | 3.54e-07 | 24 |
pharyngeal arch system | 3.54e-07 | 24 |
pharyngeal region of foregut | 3.54e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.