FFCP PHASE1:Hg19::chr8:30241649..30241675,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11030|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19097|TSSclassifier=W|UniProt=F5H357,Q93062|association_with_transcript=-268bp_to_ENST00000538486,NM_001008710,NM_001008711,NM_001008712,NM_006867,uc003xib.2,uc003xic.1,uc003xid.1,uc003xie.1,uc011lba.1_5end|coexpression_cluster_id=C1133|description=CAGE_peak_6_at_RBPMS_5end|id=chr8:30241649..30241675,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;6.98e-15;13|ontology_enrichment_celltype_v019_2=CL:0000136,8.50e-13,15|ontology_enrichment_development_v019=UBERON:0007297;6.81e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.37e-19!115;UBERON:0000481!6.53e-12!347;UBERON:0000475!2.87e-09!365;UBERON:0002100!3.23e-08!216;UBERON:0003104!4.56e-08!238;UBERON:0009142!4.56e-08!238;UBERON:0001007!5.99e-08!155;UBERON:0001555!5.99e-08!155;UBERON:0007026!5.99e-08!155;UBERON:0000466!2.34e-07!126;UBERON:0004921!3.34e-07!129;UBERON:0004185!3.34e-07!129;UBERON:0000464!7.32e-07!104;UBERON:0000477!8.58e-07!286|ontology_enrichment_uberon_v019=UBERON:0006947;2.46e-12;3!UBERON:0004054;2.46e-12;3!UBERON:0005904;2.28e-09;4!UBERON:0003135;8.09e-09;11!UBERON:0003101;5.78e-08;22!UBERON:0000079;5.78e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-14,114;UBERON:0006947,2.33e-12,3;UBERON:0004054,2.33e-12,3;UBERON:0005904,2.19e-09,4;UBERON:0003135,6.96e-09,11;UBERON:0003064,4.20e-08,28;UBERON:0003101,5.02e-08,22;UBERON:0000079,5.02e-08,22;UBERON:0002553,9.19e-07,61|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,2.00146596706261,1.78784437770915,0,0,0,2.61185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0.368199594569197,0.323292113637624,0,0.403008392910561,0.508681776931463,0,0.272746120590835,0,0.975789649036763,1.32529768321485,0.348581828608555,0.621966330092223,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,3.80265104465493,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,0,0,0.428933980974443,0,0.823240336780769,0,0,0,0.301439377059586,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.45579603071565,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0.229628896329213,0,1.57349297951309,0,0.15403067420883,2.35304930753057,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0,1.66215201785745,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.706874414074119,0.202182481573316,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0.545999645631943,0.565621727814851,3.39024349860728,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.405820753925408,0,0.563391205064483,0.286822704408103,0,0.7133421029625,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.422008249231538,0,0,0,3.58646378851925,0.552567831062295,0,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,11.0480614313366,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |||
|TSSclassifier=W | |||
|UniProt=F5H357,Q93062 | |||
|association_with_transcript=-268bp_to_ENST00000538486,NM_001008710,NM_001008711,NM_001008712,NM_006867,uc003xib.2,uc003xic.1,uc003xid.1,uc003xie.1,uc011lba.1_5end | |||
|coexpression_cluster_id=C1133 | |||
|description=CAGE_peak_6_at_RBPMS_5end | |||
|id=chr8:30241649..30241675,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.98e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.50e-13,15 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.81e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.37e-19!115;UBERON:0000481!6.53e-12!347;UBERON:0000475!2.87e-09!365;UBERON:0002100!3.23e-08!216;UBERON:0003104!4.56e-08!238;UBERON:0009142!4.56e-08!238;UBERON:0001007!5.99e-08!155;UBERON:0001555!5.99e-08!155;UBERON:0007026!5.99e-08!155;UBERON:0000466!2.34e-07!126;UBERON:0004921!3.34e-07!129;UBERON:0004185!3.34e-07!129;UBERON:0000464!7.32e-07!104;UBERON:0000477!8.58e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.46e-12;3!UBERON:0004054;2.46e-12;3!UBERON:0005904;2.28e-09;4!UBERON:0003135;8.09e-09;11!UBERON:0003101;5.78e-08;22!UBERON:0000079;5.78e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-14,114;UBERON:0006947,2.33e-12,3;UBERON:0004054,2.33e-12,3;UBERON:0005904,2.19e-09,4;UBERON:0003135,6.96e-09,11;UBERON:0003064,4.20e-08,28;UBERON:0003101,5.02e-08,22;UBERON:0000079,5.02e-08,22;UBERON:0002553,9.19e-07,61 | |||
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| |||
|short_description=p6@RBPMS | |||
}} |
Revision as of 05:03, 14 September 2013
Short description: | p6@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RBPMS_5end |
Coexpression cluster: | C1133_mature_smooth_bladder_aorta_heart_adipose_penis |
Association with transcript: | -268bp_to_ENST00000538486, NM_001008710, NM_001008711, NM_001008712, NM_006867, uc003xib.2, uc003xic.1, uc003xid.1, uc003xie.1, uc011lba.1_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | F5H357Q93062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.50e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.22e-14 | 114 |
male genital duct | 2.33e-12 | 3 |
internal male genitalia | 2.33e-12 | 3 |
duct of male reproductive system | 2.19e-09 | 4 |
male reproductive organ | 6.96e-09 | 11 |
intermediate mesoderm | 4.20e-08 | 28 |
male organism | 5.02e-08 | 22 |
male reproductive system | 5.02e-08 | 22 |
anatomical cavity | 9.19e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.