FFCP PHASE1:Hg19::chr8:38261866..38261877,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=137994|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14648|TSSclassifier=S|UniProt=|association_with_transcript=8bp_to_ENST00000530448_5end|coexpression_cluster_id=C2011|description=CAGE_peak_5_at_LETM2_5end|id=chr8:38261866..38261877,+|ontology_enrichment_celltype=CL:0000066!1.06e-24!254;CL:0000220!1.73e-16!246;CL:0002321!4.73e-16!248;CL:0000548!2.09e-15!679;CL:0000004!2.09e-15!679;CL:0000255!2.09e-15!679;CL:0000012!5.60e-15!682;CL:0000076!4.34e-14!62;CL:0000077!1.34e-12!19;CL:0000063!5.51e-12!578;CL:0000003!5.39e-11!722;CL:0000222!2.35e-10!119;CL:0000213!3.99e-10!57;CL:0000215!3.99e-10!57;CL:0000144!1.00e-07!625;CL:0002076!7.41e-07!43|ontology_enrichment_celltype_v019=CL:0000077;8.34e-20;19!CL:0000076;2.66e-10;63!CL:0002166;1.73e-07;3!CL:0002621;5.95e-07;3|ontology_enrichment_celltype_v019_2=CL:0000077,4.84e-20,19;CL:0000076,1.51e-18,63;CL:0000066,2.65e-16,253;CL:0000213,2.16e-08,58;CL:0000215,2.16e-08,58;CL:0002321,2.45e-08,250;CL:0002166,1.74e-07,3;CL:0002621,6.17e-07,3;CL:0002076,7.17e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001949;5.95e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.17e-07,3|phase1_expression=0,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0.873765488520689,0.263766978228454,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.0654895377488563,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,1.04497483268405,0,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0,1.10298924103761,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,2.61656431285521,0,0,0.264818361626438,0,1.06400514659507,0,1.06748995729705,0.49333509683432,0,0.404132016209064,1.14423332179421,0,0,2.81185718200556,0,1.1409436430889,0.149448680551801,0.23486899728753,0.485618833104395,0,0.204154171254893,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0.625592599359821,1.6623846929051,0,0,0,0.340296549480063,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.403008392910561,0.847802961552438,2.70565194428616,4.63668405004419,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.661763836394364,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,5.60967095213783,0,0,0,0,0,0,0.368965315629341,1.02940686179115,1.53650399572076,1.1240175325762,0,1.574003567695,0.325808305310325,2.07986957055916,1.44331342025273,0,0.70445216541493,0.721832238805369,0.462985512576611,0.190254152234598,0,0,0,0,0,6.56136837907439,3.69560682037491,2.41017665312057,3.76145795351963,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.5867062865676,0.517086863031111,0,2.535908257668,0.26593811658487,0,0.514414748524284,0,1.8649552531127,0.142977993658148,0,0,1.62868092146868,0,0.791951872933429,0.904318131178758,1.74306691720059,1.99945982364114,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0,0.574890092096664,1.03850885836724,0.929683027679674,0,1.60405176242628,0.644566922551274,0.459257792658427,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,2.04112446331819,0.647747748306418,0,0.812839312631559,0,2.29388645740534,0,0.447749509444357,0,0,0,0,0.650756789328606,0.103041011647722,0,0,2.87132768998086,0.650060246036521,1.6068392984416,0,0.308097234229289,0.307007349452259,0.827019434907183,0.429680979473094,0.145016693914229,0.255679882248303,0.0890320356467374,1.32227932288782,0.576570202095319,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0.616067160352178,2.66153015158511,0.869932992075073,0,0,0,0,0,0.511795582622668,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.117812402345686,1.41527737101321,0,0,0.48763373908959,0.487426979262569,2.11300293513511,0.272999822815972,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,1.43411352204052,0.392996164052485,0,1.06428319221179,0,0,0.379473173765715,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=137994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14648 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000530448_5end | |||
|coexpression_cluster_id=C2011 | |||
|description=CAGE_peak_5_at_LETM2_5end | |||
|id=chr8:38261866..38261877,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-24!254;CL:0000220!1.73e-16!246;CL:0002321!4.73e-16!248;CL:0000548!2.09e-15!679;CL:0000004!2.09e-15!679;CL:0000255!2.09e-15!679;CL:0000012!5.60e-15!682;CL:0000076!4.34e-14!62;CL:0000077!1.34e-12!19;CL:0000063!5.51e-12!578;CL:0000003!5.39e-11!722;CL:0000222!2.35e-10!119;CL:0000213!3.99e-10!57;CL:0000215!3.99e-10!57;CL:0000144!1.00e-07!625;CL:0002076!7.41e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.34e-20;19!CL:0000076;2.66e-10;63!CL:0002166;1.73e-07;3!CL:0002621;5.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.84e-20,19;CL:0000076,1.51e-18,63;CL:0000066,2.65e-16,253;CL:0000213,2.16e-08,58;CL:0000215,2.16e-08,58;CL:0002321,2.45e-08,250;CL:0002166,1.74e-07,3;CL:0002621,6.17e-07,3;CL:0002076,7.17e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.17e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0.873765488520689,0.263766978228454,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.0654895377488563,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,1.04497483268405,0,0.71153252537342,0.33472061276467,1.20848795132744,0.760272105718513,0,1.10298924103761,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,2.61656431285521,0,0,0.264818361626438,0,1.06400514659507,0,1.06748995729705,0.49333509683432,0,0.404132016209064,1.14423332179421,0,0,2.81185718200556,0,1.1409436430889,0.149448680551801,0.23486899728753,0.485618833104395,0,0.204154171254893,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0.625592599359821,1.6623846929051,0,0,0,0.340296549480063,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0.403008392910561,0.847802961552438,2.70565194428616,4.63668405004419,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.661763836394364,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,5.60967095213783,0,0,0,0,0,0,0.368965315629341,1.02940686179115,1.53650399572076,1.1240175325762,0,1.574003567695,0.325808305310325,2.07986957055916,1.44331342025273,0,0.70445216541493,0.721832238805369,0.462985512576611,0.190254152234598,0,0,0,0,0,6.56136837907439,3.69560682037491,2.41017665312057,3.76145795351963,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.5867062865676,0.517086863031111,0,2.535908257668,0.26593811658487,0,0.514414748524284,0,1.8649552531127,0.142977993658148,0,0,1.62868092146868,0,0.791951872933429,0.904318131178758,1.74306691720059,1.99945982364114,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0,0.574890092096664,1.03850885836724,0.929683027679674,0,1.60405176242628,0.644566922551274,0.459257792658427,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,2.04112446331819,0.647747748306418,0,0.812839312631559,0,2.29388645740534,0,0.447749509444357,0,0,0,0,0.650756789328606,0.103041011647722,0,0,2.87132768998086,0.650060246036521,1.6068392984416,0,0.308097234229289,0.307007349452259,0.827019434907183,0.429680979473094,0.145016693914229,0.255679882248303,0.0890320356467374,1.32227932288782,0.576570202095319,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0.616067160352178,2.66153015158511,0.869932992075073,0,0,0,0,0,0.511795582622668,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.117812402345686,1.41527737101321,0,0,0.48763373908959,0.487426979262569,2.11300293513511,0.272999822815972,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,1.43411352204052,0.392996164052485,0,1.06428319221179,0,0,0.379473173765715,0.349934720244983,1.63577591633371,1.34060455107157,2.17781969722645,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,3.58116727106535,0.296964680832639,7.6790175524808,0,0,0.556543525114529,9.06421308247178,0,0,0,0,0,0,0.311039587661807,4.04407580162971,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.0897576444097721,0,6.69902435437031,0.366390373607449,4.79731298416771,0,0,0,0,0,0,0,0,0.421996129056054,7.5087091753208,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05784034570193,5.22355239482415,0,1.71986032471617,0,0.0730893170861856,0,0,0,0,2.87788041758177,0.596143835108969,0,0,0.400794101257669,0,0,0,0,0,4.46569873763264,4.10033367365927,0.235694034616795,12.3672827526989,14.0167814058526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16801009558219,0,5.75745591958336,0,0,0,0,1.72844298240254,0.326587360109409,0,0,1.19271615249795,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,3.99951893486892,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0.443565449968902,1.2743741373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| |||
|short_description=p5@LETM2 | |||
}} |
Revision as of 05:12, 14 September 2013
Short description: | p5@LETM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LETM2_5end |
Coexpression cluster: | C2011_mucinous_mesothelioma_squamous_glioblastoma_anaplastic_Mallassezderived_amniotic |
Association with transcript: | 8bp_to_ENST00000530448_5end |
EntrezGene: | LETM2 |
HGNC: | 14648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.84e-20 | 19 |
squamous epithelial cell | 1.51e-18 | 63 |
epithelial cell | 2.65e-16 | 253 |
lining cell | 2.16e-08 | 58 |
barrier cell | 2.16e-08 | 58 |
embryonic cell | 2.45e-08 | 250 |
epithelial cell of Malassez | 1.74e-07 | 3 |
gingival epithelial cell | 6.17e-07 | 3 |
endo-epithelial cell | 7.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.17e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.