FFCP PHASE1:Mm9::chr5:148118840..148118857,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12591|HGNC=|MCL_coexpression_id=412|UniProt=P43241|association_with_transcript=0bp_to_ENSMUST00000031650_5end|description=CAGE_peak_2_at_Cdx2_5end|id=chr5:148118840..148118857,-|ontology_enrichment_celltype=CL:0002563!4.38e-11!9;CL:0002251!4.38e-11!9;CL:0000239!1.55e-07!6;CL:0000677!1.55e-07!6;CL:0000212!1.55e-07!6;CL:0000584!1.55e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,9.50e-15,9;CL:0002251,9.50e-15,9;CL:0000239,7.69e-10,6;CL:0000677,7.69e-10,6;CL:0000584,7.69e-10,6;CL:0000075,2.70e-08,7;CL:0002076,5.54e-08,15;CL:0000066,2.00e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.84e-25!43;UBERON:0005409!2.21e-23!59;UBERON:0000344!2.03e-17!15;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0003350!4.38e-11!9;UBERON:0004808!4.38e-11!9;UBERON:0001277!4.38e-11!9;UBERON:0004923!5.41e-10!24;UBERON:0000485!1.43e-08!11;UBERON:0004119!4.60e-07!130;UBERON:0000925!4.60e-07!130;UBERON:0006595!4.60e-07!130;UBERON:0001007!6.50e-07!128;UBERON:0001555!6.50e-07!128;UBERON:0007026!6.50e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.00e-48,31;UBERON:0005409,7.98e-33,47;UBERON:0000344,1.57e-23,15;UBERON:0001242,7.08e-21,13;UBERON:0001262,7.08e-21,13;UBERON:0004786,7.08e-21,13;UBERON:0003350,9.50e-15,9;UBERON:0004808,9.50e-15,9;UBERON:0001277,9.50e-15,9;UBERON:0004923,4.66e-13,24;UBERON:0000485,1.16e-11,11;UBERON:0001007,2.72e-09,116;UBERON:0001555,2.72e-09,116;UBERON:0007026,2.72e-09,116;UBERON:0004119,5.60e-09,118;UBERON:0000925,5.60e-09,118;UBERON:0006595,5.60e-09,118;UBERON:0002108,4.36e-08,4;UBERON:0004921,4.78e-08,114|phase1_expression=0,19.5426228278042,16.3799726180233,20.8700305801713,14.0250804384977,18.6345991822198,17.7545606852599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2393256286132,17.6645146421721,18.3754228516806,15.5074318617267,19.1769397090441,44.6555035722479,40.3248207615889,20.1774764696327,0,0,0,27.1520522566198,32.5819904902645,22.0502904763359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0948465705371,0,0,25.2902484656505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,20.6271441997565,6.82522401712749,10.9151235774406,21.0053961955012,20.9750865608276,18.4573776391242,18.8323369851434,24.6755112003146,14.822905925161,14.0747716928151,13.3300836267571,15.9870551437679,22.4704852163555,14.4812493416045,14.9355954940775,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81394134178851,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,2.37611749807963,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,22.1641604328966,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,1.10992976687032,1.97370484540847,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0.628839487883947,1.2869045591501,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,1.50901073108861,1.40462261204824,0.832326981263301,0.918967503289812,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,1.17759136107518,0,0.354951612318675,0,1.0174249164263,0.752875043322645,0.592302255241736,1.09756783723664,0.789209134313529,1.08643291076689,1.12228454331548,1.42362021749009,0.689531376628944,1.63692417267876,1.08455788830176,1.54325288784913,0,2.33931608445408,1.07435527024149,0,0,0|short_description=p2@Cdx2}} | ||
|EntrezGene=12591 | |||
|HGNC= | |||
|MCL_coexpression_id=412 | |||
|UniProt=P43241 | |||
|association_with_transcript=0bp_to_ENSMUST00000031650_5end | |||
|description=CAGE_peak_2_at_Cdx2_5end | |||
|id=chr5:148118840..148118857,- | |||
|ontology_enrichment_celltype=CL:0002563!4.38e-11!9;CL:0002251!4.38e-11!9;CL:0000239!1.55e-07!6;CL:0000677!1.55e-07!6;CL:0000212!1.55e-07!6;CL:0000584!1.55e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.50e-15,9;CL:0002251,9.50e-15,9;CL:0000239,7.69e-10,6;CL:0000677,7.69e-10,6;CL:0000584,7.69e-10,6;CL:0000075,2.70e-08,7;CL:0002076,5.54e-08,15;CL:0000066,2.00e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.84e-25!43;UBERON:0005409!2.21e-23!59;UBERON:0000344!2.03e-17!15;UBERON:0001242!1.67e-15!13;UBERON:0000060!1.67e-15!13;UBERON:0001262!1.67e-15!13;UBERON:0004786!1.67e-15!13;UBERON:0003350!4.38e-11!9;UBERON:0004808!4.38e-11!9;UBERON:0001277!4.38e-11!9;UBERON:0004923!5.41e-10!24;UBERON:0000485!1.43e-08!11;UBERON:0004119!4.60e-07!130;UBERON:0000925!4.60e-07!130;UBERON:0006595!4.60e-07!130;UBERON:0001007!6.50e-07!128;UBERON:0001555!6.50e-07!128;UBERON:0007026!6.50e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.00e-48,31;UBERON:0005409,7.98e-33,47;UBERON:0000344,1.57e-23,15;UBERON:0001242,7.08e-21,13;UBERON:0001262,7.08e-21,13;UBERON:0004786,7.08e-21,13;UBERON:0003350,9.50e-15,9;UBERON:0004808,9.50e-15,9;UBERON:0001277,9.50e-15,9;UBERON:0004923,4.66e-13,24;UBERON:0000485,1.16e-11,11;UBERON:0001007,2.72e-09,116;UBERON:0001555,2.72e-09,116;UBERON:0007026,2.72e-09,116;UBERON:0004119,5.60e-09,118;UBERON:0000925,5.60e-09,118;UBERON:0006595,5.60e-09,118;UBERON:0002108,4.36e-08,4;UBERON:0004921,4.78e-08,114 | |||
|phase1_expression=0,19.5426228278042,16.3799726180233,20.8700305801713,14.0250804384977,18.6345991822198,17.7545606852599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2393256286132,17.6645146421721,18.3754228516806,15.5074318617267,19.1769397090441,44.6555035722479,40.3248207615889,20.1774764696327,0,0,0,27.1520522566198,32.5819904902645,22.0502904763359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0948465705371,0,0,25.2902484656505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,20.6271441997565,6.82522401712749,10.9151235774406,21.0053961955012,20.9750865608276,18.4573776391242,18.8323369851434,24.6755112003146,14.822905925161,14.0747716928151,13.3300836267571,15.9870551437679,22.4704852163555,14.4812493416045,14.9355954940775,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81394134178851,0,0,0,2.32585463851399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,2.37611749807963,0.418176592028937,0.87345025498471,0,0.0826534557253359,0,22.1641604328966,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,1.10992976687032,1.97370484540847,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0.628839487883947,1.2869045591501,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,1.50901073108861,1.40462261204824,0.832326981263301,0.918967503289812,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,1.17759136107518,0,0.354951612318675,0,1.0174249164263,0.752875043322645,0.592302255241736,1.09756783723664,0.789209134313529,1.08643291076689,1.12228454331548,1.42362021749009,0.689531376628944,1.63692417267876,1.08455788830176,1.54325288784913,0,2.33931608445408,1.07435527024149,0,0,0 | |||
|short_description=p2@Cdx2 | |||
}} |
Revision as of 07:03, 14 September 2013
Short description: | p2@Cdx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | 0bp_to_ENSMUST00000031650_5end |
EntrezGene: | Cdx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.50e-15 | 9 |
epithelial cell of alimentary canal | 9.50e-15 | 9 |
brush border epithelial cell | 7.69e-10 | 6 |
gut absorptive cell | 7.69e-10 | 6 |
enterocyte | 7.69e-10 | 6 |
columnar/cuboidal epithelial cell | 2.70e-08 | 7 |
endo-epithelial cell | 5.54e-08 | 15 |
epithelial cell | 2.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.00e-48 | 31 |
gastrointestinal system | 7.98e-33 | 47 |
mucosa | 1.57e-23 | 15 |
intestinal mucosa | 7.08e-21 | 13 |
wall of intestine | 7.08e-21 | 13 |
gastrointestinal system mucosa | 7.08e-21 | 13 |
epithelium of mucosa | 9.50e-15 | 9 |
gastrointestinal system epithelium | 9.50e-15 | 9 |
intestinal epithelium | 9.50e-15 | 9 |
organ component layer | 4.66e-13 | 24 |
simple columnar epithelium | 1.16e-11 | 11 |
digestive system | 2.72e-09 | 116 |
digestive tract | 2.72e-09 | 116 |
primitive gut | 2.72e-09 | 116 |
endoderm-derived structure | 5.60e-09 | 118 |
endoderm | 5.60e-09 | 118 |
presumptive endoderm | 5.60e-09 | 118 |
small intestine | 4.36e-08 | 4 |
subdivision of digestive tract | 4.78e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.