FFCP PHASE1:Mm9::chr5:27208073..27208074,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1170|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:27208073..27208074,+|id=chr5:27208073..27208074,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!8.95e-10!12;UBERON:0003057!8.95e-10!12;UBERON:0002298!4.23e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.01e-13,4;UBERON:0002680,1.01e-13,4;UBERON:0001895,1.01e-13,4;UBERON:0010092,1.01e-13,4;UBERON:0006215,1.01e-13,4;UBERON:0003076,3.87e-10,12;UBERON:0003057,3.87e-10,12;UBERON:0004733,1.78e-09,6;UBERON:0004732,1.78e-09,6;UBERON:0002028,1.78e-09,6;UBERON:0007277,1.78e-09,6;UBERON:0002106,3.47e-09,6;UBERON:0004457,3.47e-09,6;UBERON:0000042,3.47e-09,6;UBERON:0004854,3.47e-09,6;UBERON:0009034,3.47e-09,6;UBERON:0002095,3.47e-09,6;UBERON:0004782,3.47e-09,6;UBERON:0003281,3.47e-09,6;UBERON:0009664,3.47e-09,6;UBERON:0002296,3.47e-09,6;UBERON:0005602,3.47e-09,6;UBERON:0001179,3.47e-09,6;UBERON:0006293,3.47e-09,6;UBERON:0000945,1.25e-07,16;UBERON:0010039,1.25e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0.589257170947335,0.854230084794618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,13.823482649688,0,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,11.2462460747632,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.822745103010605,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,1.23832120777933,2.22233432843654,0.188368457004691,0,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.37456602987953,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.25384382367503,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr5:27208073..27208074,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1170 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:27208073..27208074,+ | |||
|id=chr5:27208073..27208074,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.95e-10!12;UBERON:0003057!8.95e-10!12;UBERON:0002298!4.23e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.01e-13,4;UBERON:0002680,1.01e-13,4;UBERON:0001895,1.01e-13,4;UBERON:0010092,1.01e-13,4;UBERON:0006215,1.01e-13,4;UBERON:0003076,3.87e-10,12;UBERON:0003057,3.87e-10,12;UBERON:0004733,1.78e-09,6;UBERON:0004732,1.78e-09,6;UBERON:0002028,1.78e-09,6;UBERON:0007277,1.78e-09,6;UBERON:0002106,3.47e-09,6;UBERON:0004457,3.47e-09,6;UBERON:0000042,3.47e-09,6;UBERON:0004854,3.47e-09,6;UBERON:0009034,3.47e-09,6;UBERON:0002095,3.47e-09,6;UBERON:0004782,3.47e-09,6;UBERON:0003281,3.47e-09,6;UBERON:0009664,3.47e-09,6;UBERON:0002296,3.47e-09,6;UBERON:0005602,3.47e-09,6;UBERON:0001179,3.47e-09,6;UBERON:0006293,3.47e-09,6;UBERON:0000945,1.25e-07,16;UBERON:0010039,1.25e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0.589257170947335,0.854230084794618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,13.823482649688,0,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,11.2462460747632,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.822745103010605,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,1.23832120777933,2.22233432843654,0.188368457004691,0,0.228778173206523,0,0,0,1.90934123603023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.37456602987953,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.25384382367503,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr5:27208073..27208074,+ | |||
}} |
Revision as of 07:19, 14 September 2013
Short description: | p@chr5:27208073..27208074, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:27208073..27208074, + |
Coexpression cluster: | MCL_coexpression_mm9:1170 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.01e-13 | 4 |
regional part of metencephalon | 1.01e-13 | 4 |
metencephalon | 1.01e-13 | 4 |
future metencephalon | 1.01e-13 | 4 |
rhombic lip | 1.01e-13 | 4 |
posterior neural tube | 3.87e-10 | 12 |
chordal neural plate | 3.87e-10 | 12 |
segmental subdivision of hindbrain | 1.78e-09 | 6 |
segmental subdivision of nervous system | 1.78e-09 | 6 |
hindbrain | 1.78e-09 | 6 |
presumptive hindbrain | 1.78e-09 | 6 |
spleen | 3.47e-09 | 6 |
cavity lining | 3.47e-09 | 6 |
serous membrane | 3.47e-09 | 6 |
gastrointestinal system mesentery | 3.47e-09 | 6 |
stomach region | 3.47e-09 | 6 |
mesentery | 3.47e-09 | 6 |
gastrointestinal system serosa | 3.47e-09 | 6 |
mesentery of stomach | 3.47e-09 | 6 |
gut mesentery | 3.47e-09 | 6 |
dorsal mesentery | 3.47e-09 | 6 |
dorsal mesogastrium | 3.47e-09 | 6 |
peritoneal cavity | 3.47e-09 | 6 |
spleen primordium | 3.47e-09 | 6 |
stomach | 1.25e-07 | 16 |
food storage organ | 1.25e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.