Personal tools

FFCP PHASE1:Mm9::chr5:65726820..65726831,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=19687|HGNC=|MCL_coexpression_id=156|UniProt=G3UXL4|association_with_transcript=-17bp_to_ENSMUST00000172780_5end|description=CAGE_peak_2_at_Rfc1_5end|id=chr5:65726820..65726831,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,5.11e-09,3;CL:0002006,5.11e-09,3;CL:0002024,5.11e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!5.95e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.69e-15,6;UBERON:0004457,1.69e-15,6;UBERON:0000042,1.69e-15,6;UBERON:0004854,1.69e-15,6;UBERON:0009034,1.69e-15,6;UBERON:0002095,1.69e-15,6;UBERON:0004782,1.69e-15,6;UBERON:0003281,1.69e-15,6;UBERON:0009664,1.69e-15,6;UBERON:0002296,1.69e-15,6;UBERON:0005602,1.69e-15,6;UBERON:0001179,1.69e-15,6;UBERON:0006293,1.69e-15,6;UBERON:0003887,5.17e-12,10;UBERON:0005172,7.43e-11,49;UBERON:0005173,7.43e-11,49;UBERON:0002417,7.43e-11,49;UBERON:0000916,7.43e-11,49;UBERON:0002323,1.49e-10,37;UBERON:0004458,1.49e-10,37;UBERON:0003886,3.42e-10,38;UBERON:0002553,7.52e-10,39;UBERON:0000473,6.48e-08,14;UBERON:0001048,1.06e-07,134;UBERON:0002107,2.11e-07,22;UBERON:0007499,2.11e-07,22;UBERON:0006925,2.11e-07,22;UBERON:0009497,2.11e-07,22;UBERON:0000015,2.11e-07,22;UBERON:0002423,2.11e-07,22;UBERON:0006235,2.11e-07,22;UBERON:0008835,2.11e-07,22;UBERON:0003894,2.11e-07,22;UBERON:0004161,2.11e-07,22;UBERON:0008836,2.11e-07,22;UBERON:0003135,2.55e-07,15;UBERON:0009569,4.30e-07,66;UBERON:0009854,5.17e-07,23;UBERON:0009856,5.17e-07,23;UBERON:0003101,8.48e-07,16;UBERON:0000079,8.48e-07,16|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.129123323441576,0.140788722151667,0.70219357896598,0,0,0,0,2.99798785634096,5.06188168474565,4.89693314689703,0,0,0,1.19060606211498,0.198581902401771,0,0,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.971020706062307,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0.346970653532272,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0.808834249737046,2.20841518460394,2.42437626567611,0,0,0,0,0.239630249011841,0.599902730993408,0.508280908292259,0,0,0.125654352112864,0,0.255715457330331,0,0,0.407357455401265,1.7416975885413,0,0,0.520481771850815,0,0.180062129805349,0,0.748401490664606,0.512454881139399,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0.702213187313235,0,0.284163499395593,0.828503090142008,0.703578179943289,0.720248245844059,0.23674473558521,0,0.154267112887378,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.280543279561274,0.252946148497029,0,0.156998727841375,0,0,3.33690211432188,1.37591296579242,1.79889689907883,2.84004169943904,0.964708639009667,1.2731292589071,1.15078454980324,1.94562272130042,1.09824565275233,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0,0.488894929326078,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0,0.945810864637146,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,0,0,0.327869890753351,0,0,0,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0,0.81443479676788,0.164970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,0,0,0.363533729477506,1.78248689192361,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0,0.301564624640779,0.238744688006273,0,0.291480836629851,0.18542530201051,4.27177201994632,1.03193433981611,2.40752885580625,10.9253705062721,8.20165366326151,2.74533807847827,0.339956859987711,0.139951452323658,0,0,0.949007980743406,0.406638934253697,0.648032044930808,0,0.655087691238533,0.269728692769641,0.247960367176008,0,0.129614973291793,0,9.01908701894705,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,0,1.29092962510329,1.17183946359555,0.943734099831398,3.38217769156408,4.32045009386798,0.316011120628178,0.810900861160657,0.410843828659309,0.389762468933385,0.716106782669926,1.19208812868759,1.32214994471966,0.590758108698309,0.706765149637033,1.295515713135,0.806609481094724,0.487289403698762,0.481059208201647,0.116876902181569,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.415149390336707,1.19707462020309,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,1.33348036680969,0.206035057238894,1.92551525755089,0,0.50695859978048,0.188626341386076,0.655490552289177,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.726732083161643,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.429742108096597,0.382576664137687,0.882365676478062,0.231867835620421|short_description=p2@Rfc1}}
|EntrezGene=19687
|HGNC=
|MCL_coexpression_id=156
|UniProt=G3UXL4
|association_with_transcript=-17bp_to_ENSMUST00000172780_5end
|description=CAGE_peak_2_at_Rfc1_5end
|id=chr5:65726820..65726831,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,5.11e-09,3;CL:0002006,5.11e-09,3;CL:0002024,5.11e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!5.95e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.69e-15,6;UBERON:0004457,1.69e-15,6;UBERON:0000042,1.69e-15,6;UBERON:0004854,1.69e-15,6;UBERON:0009034,1.69e-15,6;UBERON:0002095,1.69e-15,6;UBERON:0004782,1.69e-15,6;UBERON:0003281,1.69e-15,6;UBERON:0009664,1.69e-15,6;UBERON:0002296,1.69e-15,6;UBERON:0005602,1.69e-15,6;UBERON:0001179,1.69e-15,6;UBERON:0006293,1.69e-15,6;UBERON:0003887,5.17e-12,10;UBERON:0005172,7.43e-11,49;UBERON:0005173,7.43e-11,49;UBERON:0002417,7.43e-11,49;UBERON:0000916,7.43e-11,49;UBERON:0002323,1.49e-10,37;UBERON:0004458,1.49e-10,37;UBERON:0003886,3.42e-10,38;UBERON:0002553,7.52e-10,39;UBERON:0000473,6.48e-08,14;UBERON:0001048,1.06e-07,134;UBERON:0002107,2.11e-07,22;UBERON:0007499,2.11e-07,22;UBERON:0006925,2.11e-07,22;UBERON:0009497,2.11e-07,22;UBERON:0000015,2.11e-07,22;UBERON:0002423,2.11e-07,22;UBERON:0006235,2.11e-07,22;UBERON:0008835,2.11e-07,22;UBERON:0003894,2.11e-07,22;UBERON:0004161,2.11e-07,22;UBERON:0008836,2.11e-07,22;UBERON:0003135,2.55e-07,15;UBERON:0009569,4.30e-07,66;UBERON:0009854,5.17e-07,23;UBERON:0009856,5.17e-07,23;UBERON:0003101,8.48e-07,16;UBERON:0000079,8.48e-07,16
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.129123323441576,0.140788722151667,0.70219357896598,0,0,0,0,2.99798785634096,5.06188168474565,4.89693314689703,0,0,0,1.19060606211498,0.198581902401771,0,0,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.971020706062307,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0.346970653532272,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0.884610551949874,0.808834249737046,2.20841518460394,2.42437626567611,0,0,0,0,0.239630249011841,0.599902730993408,0.508280908292259,0,0,0.125654352112864,0,0.255715457330331,0,0,0.407357455401265,1.7416975885413,0,0,0.520481771850815,0,0.180062129805349,0,0.748401490664606,0.512454881139399,0.0937017245597288,0,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0.702213187313235,0,0.284163499395593,0.828503090142008,0.703578179943289,0.720248245844059,0.23674473558521,0,0.154267112887378,0.465067889500816,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.280543279561274,0.252946148497029,0,0.156998727841375,0,0,3.33690211432188,1.37591296579242,1.79889689907883,2.84004169943904,0.964708639009667,1.2731292589071,1.15078454980324,1.94562272130042,1.09824565275233,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0,0.488894929326078,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0,0.945810864637146,0,0,0,0,0.289298117163023,0,0.54390568381871,0,0,0,0,0.327869890753351,0,0,0,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0,0,0,0,0,0.81443479676788,0.164970122972535,0,0.242780636154981,0.604647113929502,0.565815239267694,0.295301892880773,0,0,0.363533729477506,1.78248689192361,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0,0.301564624640779,0.238744688006273,0,0.291480836629851,0.18542530201051,4.27177201994632,1.03193433981611,2.40752885580625,10.9253705062721,8.20165366326151,2.74533807847827,0.339956859987711,0.139951452323658,0,0,0.949007980743406,0.406638934253697,0.648032044930808,0,0.655087691238533,0.269728692769641,0.247960367176008,0,0.129614973291793,0,9.01908701894705,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,0,1.29092962510329,1.17183946359555,0.943734099831398,3.38217769156408,4.32045009386798,0.316011120628178,0.810900861160657,0.410843828659309,0.389762468933385,0.716106782669926,1.19208812868759,1.32214994471966,0.590758108698309,0.706765149637033,1.295515713135,0.806609481094724,0.487289403698762,0.481059208201647,0.116876902181569,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.415149390336707,1.19707462020309,0.170733605754134,0.729320151204882,0.419226325255965,0.551530525350042,1.33348036680969,0.206035057238894,1.92551525755089,0,0.50695859978048,0.188626341386076,0.655490552289177,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.726732083161643,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.429742108096597,0.382576664137687,0.882365676478062,0.231867835620421
|short_description=p2@Rfc1
}}

Revision as of 07:50, 14 September 2013

Short description:p2@Rfc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rfc1_5end
Coexpression cluster:MCL_coexpression_mm9:156
Association with transcript: -17bp_to_ENSMUST00000172780_5end
EntrezGene:Rfc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rfc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
spleen1.69e-156
cavity lining1.69e-156
serous membrane1.69e-156
gastrointestinal system mesentery1.69e-156
stomach region1.69e-156
mesentery1.69e-156
gastrointestinal system serosa1.69e-156
mesentery of stomach1.69e-156
gut mesentery1.69e-156
dorsal mesentery1.69e-156
dorsal mesogastrium1.69e-156
peritoneal cavity1.69e-156
spleen primordium1.69e-156
intraembryonic coelom5.17e-1210
abdomen element7.43e-1149
abdominal segment element7.43e-1149
abdominal segment of trunk7.43e-1149
abdomen7.43e-1149
body cavity1.49e-1037
body cavity or lining1.49e-1037
body cavity precursor3.42e-1038
anatomical cavity7.52e-1039
testis6.48e-0814
primordium1.06e-07134
liver2.11e-0722
epithelial sac2.11e-0722
digestive gland2.11e-0722
epithelium of foregut-midgut junction2.11e-0722
anatomical boundary2.11e-0722
hepatobiliary system2.11e-0722
foregut-midgut junction2.11e-0722
hepatic diverticulum2.11e-0722
liver primordium2.11e-0722
septum transversum2.11e-0722
liver bud2.11e-0722
male reproductive organ2.55e-0715
subdivision of trunk4.30e-0766
digestive tract diverticulum5.17e-0723
sac5.17e-0723
male organism8.48e-0716
male reproductive system8.48e-0716







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:65726820..65726831,-&oldid=3024129"