FFCP PHASE1:Mm9::chr6:119146466..119146536,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12288|HGNC=|MCL_coexpression_id=19|UniProt=Q0PCR6,Q3UY08|association_with_transcript=-39bp_to_NM_001255997,NM_001255998,NM_001255999,NM_009781,uc009dlu.2_5end|description=CAGE_peak_2_at_Cacna1c_5end|id=chr6:119146466..119146536,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.35e-16!18;UBERON:0000948!5.35e-16!18;UBERON:0005498!5.35e-16!18;UBERON:0004140!5.35e-16!18;UBERON:0009881!5.35e-16!18;UBERON:0004141!5.35e-16!18;UBERON:0003084!5.35e-16!18;UBERON:0007005!5.35e-16!18;UBERON:0004139!5.35e-16!18;UBERON:0004291!5.35e-16!18;UBERON:0004535!2.81e-12!23;UBERON:0001009!2.81e-12!23;UBERON:0002048!1.81e-11!14;UBERON:0000117!1.81e-11!14;UBERON:0000171!1.81e-11!14;UBERON:0000170!1.81e-11!14;UBERON:0005597!1.81e-11!14;UBERON:0000118!1.81e-11!14;UBERON:0005153!1.09e-08!17;UBERON:0005178!1.09e-08!17;UBERON:0005181!1.09e-08!17;UBERON:0002224!1.09e-08!17;UBERON:0000915!1.09e-08!17;UBERON:0008947!1.09e-08!17;UBERON:0003258!1.09e-08!17;UBERON:0004872!9.16e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.67e-24,18;UBERON:0000948,4.67e-24,18;UBERON:0005498,4.67e-24,18;UBERON:0004140,4.67e-24,18;UBERON:0009881,4.67e-24,18;UBERON:0004141,4.67e-24,18;UBERON:0003084,4.67e-24,18;UBERON:0007005,4.67e-24,18;UBERON:0004139,4.67e-24,18;UBERON:0004291,4.67e-24,18;UBERON:0004535,9.65e-18,23;UBERON:0001009,9.65e-18,23;UBERON:0004872,6.45e-11,33;UBERON:0003103,1.91e-08,43;UBERON:0003914,2.49e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,74.5652781127807,74.3447610140075,83.3687344564499,126.658433538087,161.740198496366,150.101900839419,169.052177833547,151.842745192184,204.222583800179,167.35736736201,145.944875566316,137.492700989771,158.626986356486,118.557062257167,133.938005922851,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,2.8511185898344,0,0,0,0,0,0,0,2.8363667971736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,3.60033682363921,4.4000543639347,3.05541154395339,0.469380496577004,3.68513766371995,2.38043640886014,0.585400943573396,2.36452716159286,1.32878813789265,1.43509291791738,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81467135269789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0,0,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0.51968329191118,0.358053391334963,0.39736270956253,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,2.38097111547445,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,1.19513524027894,1.21553358534147,0,0,2.00022055021454,1.03017528619447,1.92551525755089,2.02157769411038,3.04175159868288,1.88626341386076,1.49826411951812,1.53660365771686,2.23998328926892,0.952587382566147,1.50649623728312,1.35036454324594,1.64834360321323,1.03039244094078,1.71434626192708,1.59728225543404,0.953744759789284,1.16277133305863,1.12931256498397,1.52306294205018,2.19513567447327,0.789209134313529,2.17286582153379,1.12228454331548,1.77952527186261,1.37906275325789,1.63692417267876,2.01417893541756,1.92906610981141,0,1.87145286756327,1.71896843238639,0,0,0|short_description=p2@Cacna1c}} | ||
|EntrezGene=12288 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=Q0PCR6,Q3UY08 | |||
|association_with_transcript=-39bp_to_NM_001255997,NM_001255998,NM_001255999,NM_009781,uc009dlu.2_5end | |||
|description=CAGE_peak_2_at_Cacna1c_5end | |||
|id=chr6:119146466..119146536,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.35e-16!18;UBERON:0000948!5.35e-16!18;UBERON:0005498!5.35e-16!18;UBERON:0004140!5.35e-16!18;UBERON:0009881!5.35e-16!18;UBERON:0004141!5.35e-16!18;UBERON:0003084!5.35e-16!18;UBERON:0007005!5.35e-16!18;UBERON:0004139!5.35e-16!18;UBERON:0004291!5.35e-16!18;UBERON:0004535!2.81e-12!23;UBERON:0001009!2.81e-12!23;UBERON:0002048!1.81e-11!14;UBERON:0000117!1.81e-11!14;UBERON:0000171!1.81e-11!14;UBERON:0000170!1.81e-11!14;UBERON:0005597!1.81e-11!14;UBERON:0000118!1.81e-11!14;UBERON:0005153!1.09e-08!17;UBERON:0005178!1.09e-08!17;UBERON:0005181!1.09e-08!17;UBERON:0002224!1.09e-08!17;UBERON:0000915!1.09e-08!17;UBERON:0008947!1.09e-08!17;UBERON:0003258!1.09e-08!17;UBERON:0004872!9.16e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.67e-24,18;UBERON:0000948,4.67e-24,18;UBERON:0005498,4.67e-24,18;UBERON:0004140,4.67e-24,18;UBERON:0009881,4.67e-24,18;UBERON:0004141,4.67e-24,18;UBERON:0003084,4.67e-24,18;UBERON:0007005,4.67e-24,18;UBERON:0004139,4.67e-24,18;UBERON:0004291,4.67e-24,18;UBERON:0004535,9.65e-18,23;UBERON:0001009,9.65e-18,23;UBERON:0004872,6.45e-11,33;UBERON:0003103,1.91e-08,43;UBERON:0003914,2.49e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09403255366465,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,74.5652781127807,74.3447610140075,83.3687344564499,126.658433538087,161.740198496366,150.101900839419,169.052177833547,151.842745192184,204.222583800179,167.35736736201,145.944875566316,137.492700989771,158.626986356486,118.557062257167,133.938005922851,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,2.8511185898344,0,0,0,0,0,0,0,2.8363667971736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,3.60033682363921,4.4000543639347,3.05541154395339,0.469380496577004,3.68513766371995,2.38043640886014,0.585400943573396,2.36452716159286,1.32878813789265,1.43509291791738,0.983179888294428,0.690739927463582,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81467135269789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0,0,0.436725127492355,0.539457385539283,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0.51968329191118,0.358053391334963,0.39736270956253,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,2.38097111547445,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,1.19513524027894,1.21553358534147,0,0,2.00022055021454,1.03017528619447,1.92551525755089,2.02157769411038,3.04175159868288,1.88626341386076,1.49826411951812,1.53660365771686,2.23998328926892,0.952587382566147,1.50649623728312,1.35036454324594,1.64834360321323,1.03039244094078,1.71434626192708,1.59728225543404,0.953744759789284,1.16277133305863,1.12931256498397,1.52306294205018,2.19513567447327,0.789209134313529,2.17286582153379,1.12228454331548,1.77952527186261,1.37906275325789,1.63692417267876,2.01417893541756,1.92906610981141,0,1.87145286756327,1.71896843238639,0,0,0 | |||
|short_description=p2@Cacna1c | |||
}} |
Revision as of 08:41, 14 September 2013
Short description: | p2@Cacna1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cacna1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -39bp_to_NM_001255997, NM_001255998, NM_001255999, NM_009781, uc009dlu.2_5end |
EntrezGene: | Cacna1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.67e-24 | 18 |
heart | 4.67e-24 | 18 |
primitive heart tube | 4.67e-24 | 18 |
primary heart field | 4.67e-24 | 18 |
anterior lateral plate mesoderm | 4.67e-24 | 18 |
heart tube | 4.67e-24 | 18 |
heart primordium | 4.67e-24 | 18 |
cardiac mesoderm | 4.67e-24 | 18 |
cardiogenic plate | 4.67e-24 | 18 |
heart rudiment | 4.67e-24 | 18 |
cardiovascular system | 9.65e-18 | 23 |
circulatory system | 9.65e-18 | 23 |
splanchnic layer of lateral plate mesoderm | 6.45e-11 | 33 |
compound organ | 1.91e-08 | 43 |
epithelial tube | 2.49e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.