FFCP PHASE1:Hg19::chr9:37027156..37027193,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5079|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=8619|TSSclassifier=S|UniProt=Q93057|association_with_transcript=-437bp_to_U62539_5end|coexpression_cluster_id=C47|description=CAGE_peak_4_at_PAX5_5end|id=chr9:37027156..37027193,-|ontology_enrichment_celltype=CL:0000945!2.17e-48!24;CL:0000826!2.17e-48!24;CL:0000236!2.60e-32!14;CL:0000542!1.53e-23!53;CL:0000051!1.53e-23!53;CL:0000838!3.92e-22!52;CL:0002087!1.09e-12!119;CL:0000738!3.64e-10!140;CL:0000037!2.97e-09!172;CL:0000566!2.97e-09!172;CL:0002031!1.61e-08!124;CL:0000988!3.22e-08!182;CL:0002032!4.91e-08!165;CL:0000837!4.91e-08!165;CL:0000817!4.93e-08!3|ontology_enrichment_celltype_v019=CL:0000945;2.47e-97;24!CL:0000236;1.01e-59;13!CL:0000542;3.68e-34;53!CL:0002087;2.21e-08;104|ontology_enrichment_celltype_v019_2=CL:0000945,2.18e-97,24;CL:0000826,2.18e-97,24;CL:0000236,4.90e-64,14;CL:0000542,7.94e-53,53;CL:0000051,7.94e-53,53;CL:0000838,8.34e-50,52;CL:0002087,1.42e-22,115;CL:0002031,1.24e-19,120;CL:0000738,3.82e-18,136;CL:0002032,4.53e-17,161;CL:0000837,4.53e-17,161;CL:0000037,4.35e-16,168;CL:0000988,6.12e-15,177;CL:0000817,1.19e-14,3;CL:0000785,1.93e-10,2;CL:0000955,1.93e-10,2;CL:0000818,1.93e-10,2;CL:0000954,1.93e-10,2;CL:0000816,1.93e-10,2|ontology_enrichment_development_v019=CL:0000051;3.68e-34;53!UBERON:0004872;1.79e-10;7!CL:0000954;2.02e-10;2|ontology_enrichment_disease=DOID:0060058!6.49e-11!10;DOID:2531!1.72e-08!51;DOID:0060083!1.72e-08!51|ontology_enrichment_disease_v019=DOID:0060058;1.56e-21;10!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51|ontology_enrichment_disease_v019_2=DOID:0060058,1.56e-21,10;DOID:2531,6.00e-12,51;DOID:0060083,6.00e-12,51|ontology_enrichment_uberon=UBERON:0000178!4.23e-15!15;UBERON:0000179!4.23e-15!15;UBERON:0000463!4.23e-15!15;UBERON:0002106!8.67e-08!3;UBERON:0004854!8.67e-08!3;UBERON:0009034!8.67e-08!3;UBERON:0002095!8.67e-08!3;UBERON:0004782!8.67e-08!3;UBERON:0003281!8.67e-08!3;UBERON:0009664!8.67e-08!3;UBERON:0002296!8.67e-08!3;UBERON:0005602!8.67e-08!3;UBERON:0001179!8.67e-08!3;UBERON:0006293!8.67e-08!3;UBERON:0004177!1.29e-07!7|ontology_enrichment_uberon_v019=UBERON:0002106;4.77e-14;3!UBERON:0004177;1.29e-08;5!UBERON:0005057;1.29e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.73e-14,3;UBERON:0004854,3.73e-14,3;UBERON:0009034,3.73e-14,3;UBERON:0002095,3.73e-14,3;UBERON:0004782,3.73e-14,3;UBERON:0003281,3.73e-14,3;UBERON:0009664,3.73e-14,3;UBERON:0002296,3.73e-14,3;UBERON:0005602,3.73e-14,3;UBERON:0001179,3.73e-14,3;UBERON:0006293,3.73e-14,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,1.55991119954897,2.2826126580967,0,0,0.154816123316076,0,0,0,5.65510564236202,2.70121541726101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.09980194640771,8.89509253863555,5.9742231159311,10.4102956629363,10.9202963591352,9.91567309177293,11.4486450544244,10.2458334439701,7.04684627245127,11.4681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,3.24018862342869,2.37937552888281,0,0,0,1.67222857613147,3.46246111143468,0,0,0,0,0,2.27235358192189,0,0,0,0,0,0,0.80719882876419,0,0,0.921722292925374,0.671028323677248,1.16794399198336,0.390776190804081,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,4.97311047956066,0.251932747854276,0,2.46169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48064635784231,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.686379991447858,0,0,0,0,0,0,0.288950589901519,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37085329784197,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.9846640872478,0,8.64727448504361,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,1.40500471742064,0.724605143054126,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8619 | |||
|TSSclassifier=S | |||
|UniProt=Q93057 | |||
|association_with_transcript=-437bp_to_U62539_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_PAX5_5end | |||
|id=chr9:37027156..37027193,- | |||
|ontology_enrichment_celltype=CL:0000945!2.17e-48!24;CL:0000826!2.17e-48!24;CL:0000236!2.60e-32!14;CL:0000542!1.53e-23!53;CL:0000051!1.53e-23!53;CL:0000838!3.92e-22!52;CL:0002087!1.09e-12!119;CL:0000738!3.64e-10!140;CL:0000037!2.97e-09!172;CL:0000566!2.97e-09!172;CL:0002031!1.61e-08!124;CL:0000988!3.22e-08!182;CL:0002032!4.91e-08!165;CL:0000837!4.91e-08!165;CL:0000817!4.93e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.47e-97;24!CL:0000236;1.01e-59;13!CL:0000542;3.68e-34;53!CL:0002087;2.21e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.18e-97,24;CL:0000826,2.18e-97,24;CL:0000236,4.90e-64,14;CL:0000542,7.94e-53,53;CL:0000051,7.94e-53,53;CL:0000838,8.34e-50,52;CL:0002087,1.42e-22,115;CL:0002031,1.24e-19,120;CL:0000738,3.82e-18,136;CL:0002032,4.53e-17,161;CL:0000837,4.53e-17,161;CL:0000037,4.35e-16,168;CL:0000988,6.12e-15,177;CL:0000817,1.19e-14,3;CL:0000785,1.93e-10,2;CL:0000955,1.93e-10,2;CL:0000818,1.93e-10,2;CL:0000954,1.93e-10,2;CL:0000816,1.93e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.68e-34;53!UBERON:0004872;1.79e-10;7!CL:0000954;2.02e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.49e-11!10;DOID:2531!1.72e-08!51;DOID:0060083!1.72e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.56e-21;10!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.56e-21,10;DOID:2531,6.00e-12,51;DOID:0060083,6.00e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.23e-15!15;UBERON:0000179!4.23e-15!15;UBERON:0000463!4.23e-15!15;UBERON:0002106!8.67e-08!3;UBERON:0004854!8.67e-08!3;UBERON:0009034!8.67e-08!3;UBERON:0002095!8.67e-08!3;UBERON:0004782!8.67e-08!3;UBERON:0003281!8.67e-08!3;UBERON:0009664!8.67e-08!3;UBERON:0002296!8.67e-08!3;UBERON:0005602!8.67e-08!3;UBERON:0001179!8.67e-08!3;UBERON:0006293!8.67e-08!3;UBERON:0004177!1.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.77e-14;3!UBERON:0004177;1.29e-08;5!UBERON:0005057;1.29e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.73e-14,3;UBERON:0004854,3.73e-14,3;UBERON:0009034,3.73e-14,3;UBERON:0002095,3.73e-14,3;UBERON:0004782,3.73e-14,3;UBERON:0003281,3.73e-14,3;UBERON:0009664,3.73e-14,3;UBERON:0002296,3.73e-14,3;UBERON:0005602,3.73e-14,3;UBERON:0001179,3.73e-14,3;UBERON:0006293,3.73e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,1.55991119954897,2.2826126580967,0,0,0.154816123316076,0,0,0,5.65510564236202,2.70121541726101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,7.09980194640771,8.89509253863555,5.9742231159311,10.4102956629363,10.9202963591352,9.91567309177293,11.4486450544244,10.2458334439701,7.04684627245127,11.4681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,3.24018862342869,2.37937552888281,0,0,0,1.67222857613147,3.46246111143468,0,0,0,0,0,2.27235358192189,0,0,0,0,0,0,0.80719882876419,0,0,0.921722292925374,0.671028323677248,1.16794399198336,0.390776190804081,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,4.97311047956066,0.251932747854276,0,2.46169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48064635784231,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.686379991447858,0,0,0,0,0,0,0.288950589901519,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37085329784197,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.9846640872478,0,8.64727448504361,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,1.40500471742064,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0,1.83302179374359,0.157265941855896,1.20130602011215,0,0,0,0,0,7.25528054011531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14842355200805,0,0,0,0,0,0,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,0.109940516745429,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,3.47740496525458,1.99819452718089,4.09758739292209,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.918948995348449,0,0,0,0,0,0.426467963801962,0,0.258355639344024,0.186224142887574,0,0,0,0.217716747896961,0,4.98405192307948,0.143444410785353,0,0.407016343054873,0,0,0,0,0,0.406896178315738,0,3.01910690386539,2.24397944612263 | |||
|short_description=p4@PAX5 | |||
}} |
Revision as of 09:01, 14 September 2013
Short description: | p4@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PAX5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -437bp_to_U62539_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | Q93057 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.18e-97 | 24 |
pro-B cell | 2.18e-97 | 24 |
B cell | 4.90e-64 | 14 |
lymphocyte | 7.94e-53 | 53 |
common lymphoid progenitor | 7.94e-53 | 53 |
lymphoid lineage restricted progenitor cell | 8.34e-50 | 52 |
nongranular leukocyte | 1.42e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
leukocyte | 3.82e-18 | 136 |
hematopoietic oligopotent progenitor cell | 4.53e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-17 | 161 |
hematopoietic stem cell | 4.35e-16 | 168 |
hematopoietic cell | 6.12e-15 | 177 |
precursor B cell | 1.19e-14 | 3 |
mature B cell | 1.93e-10 | 2 |
pre-B-II cell | 1.93e-10 | 2 |
transitional stage B cell | 1.93e-10 | 2 |
small pre-B-II cell | 1.93e-10 | 2 |
immature B cell | 1.93e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.73e-14 | 3 |
gastrointestinal system mesentery | 3.73e-14 | 3 |
stomach region | 3.73e-14 | 3 |
mesentery | 3.73e-14 | 3 |
gastrointestinal system serosa | 3.73e-14 | 3 |
mesentery of stomach | 3.73e-14 | 3 |
gut mesentery | 3.73e-14 | 3 |
dorsal mesentery | 3.73e-14 | 3 |
dorsal mesogastrium | 3.73e-14 | 3 |
peritoneal cavity | 3.73e-14 | 3 |
spleen primordium | 3.73e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.56e-21 | 10 |
hematologic cancer | 6.00e-12 | 51 |
immune system cancer | 6.00e-12 | 51 |
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