FFCP PHASE1:Hg19::chr9:6248469..6248472,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C238|description=CAGE_peak_at_chr9:6248469..6248472,+|id=chr9:6248469..6248472,+|ontology_enrichment_celltype=CL:1000306!5.66e-14!4;CL:0002547!5.66e-14!4;CL:0000359!6.92e-09!32;CL:0002594!2.21e-08!4;CL:0000192!1.18e-07!42;CL:0000514!1.18e-07!42;CL:0002589!1.86e-07!2;CL:0002494!4.24e-07!16;CL:0000222!7.91e-07!119|ontology_enrichment_celltype_v019=CL:0002174;8.35e-13;1!CL:0000501;8.35e-13;1!CL:0002557;2.91e-12;1!CL:0002568;2.91e-12;1!CL:0002593;9.27e-07;2|ontology_enrichment_celltype_v019_2=CL:0002174,7.89e-13,1;CL:0000501,7.89e-13,1;CL:0002568,1.75e-12,1;CL:0002557,4.81e-12,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!5.29e-12!14;DOID:193!7.34e-07!29|ontology_enrichment_disease_v019=DOID:2394;9.99e-20;14!DOID:193;1.79e-13;29!DOID:120;3.33e-10;27!DOID:1909;9.27e-07;2|ontology_enrichment_disease_v019_2=DOID:2394,9.06e-20,14;DOID:193,1.67e-13,29;DOID:120,3.17e-10,27|ontology_enrichment_uberon=UBERON:0001637!1.50e-19!42;UBERON:0003509!1.50e-19!42;UBERON:0004572!1.50e-19!42;UBERON:0004872!2.79e-17!84;UBERON:0001981!7.64e-16!60;UBERON:0007500!7.64e-16!60;UBERON:0004537!7.64e-16!60;UBERON:0006965!7.64e-16!60;UBERON:0004573!1.16e-14!33;UBERON:0004571!1.16e-14!33;UBERON:0000415!5.66e-14!4;UBERON:0007240!5.66e-14!4;UBERON:0005742!5.66e-14!4;UBERON:0005734!5.66e-14!4;UBERON:0004664!5.66e-14!4;UBERON:0004663!5.66e-14!4;UBERON:0000055!3.57e-13!69;UBERON:0004535!8.28e-12!110;UBERON:0001009!2.42e-11!113;UBERON:0002049!6.19e-11!79;UBERON:0007798!6.19e-11!79;UBERON:0003914!1.27e-10!118;UBERON:0000947!3.19e-09!21;UBERON:0010191!3.19e-09!21;UBERON:0001310!2.21e-08!4;UBERON:0000948!6.97e-08!24;UBERON:0005498!6.97e-08!24;UBERON:0004140!6.97e-08!24;UBERON:0009881!6.97e-08!24;UBERON:0004141!6.97e-08!24;UBERON:0003084!6.97e-08!24;UBERON:0007005!6.97e-08!24;UBERON:0004139!6.97e-08!24;UBERON:0004291!6.97e-08!24;UBERON:0001529!1.86e-07!2;UBERON:0007204!1.86e-07!2;UBERON:0002118!4.80e-07!5;UBERON:0004532!4.80e-07!5;UBERON:0007100!7.27e-07!27|ontology_enrichment_uberon_v019=UBERON:0002118;6.80e-10;5!UBERON:0000992;3.00e-08;13!UBERON:0000078;9.27e-07;2!UBERON:0002012;9.27e-07;2!UBERON:0002456;9.27e-07;2!UBERON:0008886;9.27e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002118,7.44e-10,5;UBERON:0000992,2.89e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,1.93907573636667,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31583314765545,1.74306691720059,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07701771673448,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29765441419957,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06154382279153,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0,0.777186002913902,0,1.91156120596443,0,0,0,0.797525143673985,0,1.6528336989694,3.80805212168795,4.06870733204662,0.181848659202559,1.07410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23682402162117,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,2.24217730651031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_at_chr9:6248469..6248472,+ | |||
|id=chr9:6248469..6248472,+ | |||
|ontology_enrichment_celltype=CL:1000306!5.66e-14!4;CL:0002547!5.66e-14!4;CL:0000359!6.92e-09!32;CL:0002594!2.21e-08!4;CL:0000192!1.18e-07!42;CL:0000514!1.18e-07!42;CL:0002589!1.86e-07!2;CL:0002494!4.24e-07!16;CL:0000222!7.91e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002174;8.35e-13;1!CL:0000501;8.35e-13;1!CL:0002557;2.91e-12;1!CL:0002568;2.91e-12;1!CL:0002593;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,7.89e-13,1;CL:0000501,7.89e-13,1;CL:0002568,1.75e-12,1;CL:0002557,4.81e-12,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.29e-12!14;DOID:193!7.34e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.99e-20;14!DOID:193;1.79e-13;29!DOID:120;3.33e-10;27!DOID:1909;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.06e-20,14;DOID:193,1.67e-13,29;DOID:120,3.17e-10,27 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002118;6.80e-10;5!UBERON:0000992;3.00e-08;13!UBERON:0000078;9.27e-07;2!UBERON:0002012;9.27e-07;2!UBERON:0002456;9.27e-07;2!UBERON:0008886;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,7.44e-10,5;UBERON:0000992,2.89e-08,13 | |||
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|short_description=p@chr9:6248469..6248472,+ | |||
}} |
Revision as of 09:10, 14 September 2013
Short description: | p@chr9:6248469..6248472, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:6248469..6248472, + |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 7.89e-13 | 1 |
granulosa cell | 7.89e-13 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.75e-12 | 1 |
fibroblast of pulmonary artery | 4.81e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
right ovary | 7.44e-10 | 5 |
female gonad | 2.89e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.06e-20 | 14 |
reproductive organ cancer | 1.67e-13 | 29 |
female reproductive organ cancer | 3.17e-10 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.