FFCP PHASE1:Mm9::chr6:17699568..17699572,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64213|HGNC=|MCL_coexpression_id=3071|UniProt=|association_with_transcript=176bp_to_ENSMUST00000140358_5end|description=CAGE_peak_22_at_St7_5end|id=chr6:17699568..17699572,+|ontology_enrichment_celltype=CL:0002608!2.00e-10!3;CL:0000117!7.36e-10!23;CL:0000337!7.36e-10!23;CL:0002609!1.32e-08!6;CL:0000540!5.40e-08!33;CL:0000047!5.40e-08!33;CL:0000031!5.40e-08!33;CL:0000404!5.40e-08!33;CL:0002319!5.73e-07!43;CL:0000221!9.18e-07!44;CL:0000133!9.18e-07!44|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002608,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23;CL:0002609,1.52e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.03e-07!34;UBERON:0001049!1.06e-07!52;UBERON:0005068!1.06e-07!52;UBERON:0006241!1.06e-07!52;UBERON:0007135!1.06e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,1.34183659425531,0.919218786610021,0,0,0,0,2.47016637726506,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p22@St7}} | ||
|EntrezGene=64213 | |||
|HGNC= | |||
|MCL_coexpression_id=3071 | |||
|UniProt= | |||
|association_with_transcript=176bp_to_ENSMUST00000140358_5end | |||
|description=CAGE_peak_22_at_St7_5end | |||
|id=chr6:17699568..17699572,+ | |||
|ontology_enrichment_celltype=CL:0002608!2.00e-10!3;CL:0000117!7.36e-10!23;CL:0000337!7.36e-10!23;CL:0002609!1.32e-08!6;CL:0000540!5.40e-08!33;CL:0000047!5.40e-08!33;CL:0000031!5.40e-08!33;CL:0000404!5.40e-08!33;CL:0002319!5.73e-07!43;CL:0000221!9.18e-07!44;CL:0000133!9.18e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002608,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23;CL:0002609,1.52e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.03e-07!34;UBERON:0001049!1.06e-07!52;UBERON:0005068!1.06e-07!52;UBERON:0006241!1.06e-07!52;UBERON:0007135!1.06e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,1.34183659425531,0.919218786610021,0,0,0,0,2.47016637726506,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p22@St7 | |||
}} |
Revision as of 09:27, 14 September 2013
Short description: | p22@St7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_St7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3071 |
Association with transcript: | 176bp_to_ENSMUST00000140358_5end |
EntrezGene: | St7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 8.02e-16 | 3 |
hippocampal neuron | 1.12e-15 | 3 |
CNS neuron (sensu Vertebrata) | 8.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-09 | 23 |
neuron of cerebral cortex | 1.52e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.56e-10 | 5 |
striatum | 4.56e-10 | 5 |
ventral part of telencephalon | 4.56e-10 | 5 |
future corpus striatum | 4.56e-10 | 5 |
Ammon's horn | 1.64e-07 | 7 |
lobe parts of cerebral cortex | 1.64e-07 | 7 |
hippocampal formation | 1.64e-07 | 7 |
limbic system | 1.64e-07 | 7 |
limbic lobe | 1.64e-07 | 7 |
brain grey matter | 3.14e-07 | 29 |
regional part of telencephalon | 3.14e-07 | 29 |
telencephalon | 3.14e-07 | 29 |
basal ganglion | 8.61e-07 | 8 |
nuclear complex of neuraxis | 8.61e-07 | 8 |
aggregate regional part of brain | 8.61e-07 | 8 |
collection of basal ganglia | 8.61e-07 | 8 |
cerebral subcortex | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.