FFCP PHASE1:Mm9::chr6:70468195..70468203,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=-40bp_to_ENSMUST00000103396_5end|description=CAGE_peak_3_at_ENSMUST00000103396_5end|id=chr6:70468195..70468203,+|ontology_enrichment_celltype=CL:0000553!5.76e-12!6;CL:0000556!5.76e-12!6;CL:0000945!5.23e-09!1;CL:0000236!5.23e-09!1;CL:0000826!5.23e-09!1;CL:0000050!3.67e-08!9;CL:0000414!9.10e-07!11|ontology_enrichment_celltype_v019_2=CL:0000945,7.74e-19,1;CL:0000236,7.74e-19,1;CL:0000826,7.74e-19,1;CL:0000553,9.45e-13,6;CL:0000556,9.45e-13,6;CL:0000050,7.68e-09,9;CL:0002031,4.03e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!9.32e-23!3;UBERON:0001962!1.14e-15!2;UBERON:0001961!1.14e-15!2;UBERON:0001744!1.14e-15!2;UBERON:0002193!2.86e-09!48;UBERON:0003199!7.41e-09!1;UBERON:0000029!8.81e-09!1;UBERON:0001097!8.81e-09!1;UBERON:0003968!8.81e-09!1;UBERON:0008785!8.81e-09!1;UBERON:0001467!8.81e-09!1;UBERON:0001421!8.81e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.72e-24,3;UBERON:0003199,1.74e-18,1;UBERON:0000029,2.59e-18,1;UBERON:0001097,2.59e-18,1;UBERON:0003968,2.59e-18,1;UBERON:0001467,2.59e-18,1;UBERON:0001962,6.19e-10,2;UBERON:0001961,6.19e-10,2;UBERON:0001744,6.19e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,2.05050407482854,5.75880621144103,0,0,0,0,0.47997726838022,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.136694227721025,0,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@ENSMUST00000103396}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENSMUST00000103396_5end | |||
|description=CAGE_peak_3_at_ENSMUST00000103396_5end | |||
|id=chr6:70468195..70468203,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.76e-12!6;CL:0000556!5.76e-12!6;CL:0000945!5.23e-09!1;CL:0000236!5.23e-09!1;CL:0000826!5.23e-09!1;CL:0000050!3.67e-08!9;CL:0000414!9.10e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.74e-19,1;CL:0000236,7.74e-19,1;CL:0000826,7.74e-19,1;CL:0000553,9.45e-13,6;CL:0000556,9.45e-13,6;CL:0000050,7.68e-09,9;CL:0002031,4.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!9.32e-23!3;UBERON:0001962!1.14e-15!2;UBERON:0001961!1.14e-15!2;UBERON:0001744!1.14e-15!2;UBERON:0002193!2.86e-09!48;UBERON:0003199!7.41e-09!1;UBERON:0000029!8.81e-09!1;UBERON:0001097!8.81e-09!1;UBERON:0003968!8.81e-09!1;UBERON:0008785!8.81e-09!1;UBERON:0001467!8.81e-09!1;UBERON:0001421!8.81e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.72e-24,3;UBERON:0003199,1.74e-18,1;UBERON:0000029,2.59e-18,1;UBERON:0001097,2.59e-18,1;UBERON:0003968,2.59e-18,1;UBERON:0001467,2.59e-18,1;UBERON:0001962,6.19e-10,2;UBERON:0001961,6.19e-10,2;UBERON:0001744,6.19e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,2.05050407482854,5.75880621144103,0,0,0,0,0.47997726838022,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18786951509699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.136694227721025,0,0.169978429993855,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENSMUST00000103396 | |||
}} |
Revision as of 10:30, 14 September 2013
Short description: | p3@ENSMUST00000103396 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000103396_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -40bp_to_ENSMUST00000103396_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.74e-19 | 1 |
B cell | 7.74e-19 | 1 |
pro-B cell | 7.74e-19 | 1 |
megakaryocyte progenitor cell | 9.45e-13 | 6 |
megakaryocyte | 9.45e-13 | 6 |
megakaryocyte-erythroid progenitor cell | 7.68e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.72e-24 | 3 |
egg chamber | 1.74e-18 | 1 |
lymph node | 2.59e-18 | 1 |
axillary lymph node | 2.59e-18 | 1 |
peripheral lymph node | 2.59e-18 | 1 |
shoulder | 2.59e-18 | 1 |
gut-associated lymphoid tissue | 6.19e-10 | 2 |
mucosa-associated lymphoid tissue | 6.19e-10 | 2 |
lymphoid tissue | 6.19e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.