FFCP PHASE1:Hg19::chrX:30327504..30327509,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=190|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7960|TSSclassifier=S|UniProt=F1D8P4,P51843|association_with_transcript=-9bp_to_ENST00000453287,NM_000475,uc004dcf.3_5end|description=CAGE_peak_1_at_NR0B1_5end|id=chrX:30327504..30327509,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002363;1.14e-07;2|ontology_enrichment_celltype_v019_2=CL:0002363,1.16e-07,2;CL:0000008,1.16e-07,2|ontology_enrichment_development_v019=CL:0000008;1.14e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;9.75e-18;10!DOID:3095;1.42e-09;22!DOID:2994;1.42e-09;22!DOID:0050615;7.38e-08;16|ontology_enrichment_disease_v019_2=DOID:171,9.79e-18,10;DOID:0050687,1.78e-10,143;DOID:3095,1.46e-09,22;DOID:2994,1.46e-09,22;DOID:0050615,7.43e-08,16;DOID:162,5.01e-07,235;DOID:14566,9.76e-07,239|ontology_enrichment_uberon=UBERON:0002346!1.98e-10!90;UBERON:0000073!1.61e-09!94;UBERON:0001016!1.61e-09!94;UBERON:0005743!3.69e-09!86;UBERON:0001049!5.44e-09!57;UBERON:0005068!5.44e-09!57;UBERON:0006241!5.44e-09!57;UBERON:0007135!5.44e-09!57;UBERON:0000033!5.99e-09!123;UBERON:0000153!8.01e-09!129;UBERON:0007811!8.01e-09!129;UBERON:0000475!1.18e-08!365;UBERON:0000924!1.71e-08!173;UBERON:0006601!1.71e-08!173;UBERON:0003075!4.84e-08!86;UBERON:0007284!4.84e-08!86;UBERON:0001017!5.17e-08!82;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0007023!5.52e-07!115;UBERON:0002616!7.01e-07!59;UBERON:0002780!7.79e-07!41;UBERON:0001890!7.79e-07!41;UBERON:0006240!7.79e-07!41;UBERON:0003056!8.20e-07!61;UBERON:0004121!8.87e-07!169|ontology_enrichment_uberon_v019=UBERON:0002346;1.32e-15;4!UBERON:0000923;1.32e-15;4!UBERON:0010316;1.32e-15;4!UBERON:0005291;1.32e-15;4!UBERON:0002050;1.74e-12;5!UBERON:0005423;1.74e-12;5!UBERON:0003714;5.78e-08;2!UBERON:0003566;1.14e-07;2!UBERON:0001777;1.14e-07;2!UBERON:0005162;1.92e-07;2!UBERON:0000122;1.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.79e-08,2;UBERON:0003566,1.16e-07,2;UBERON:0001777,1.16e-07,2;UBERON:0005162,2.35e-07,2;UBERON:0000122,2.35e-07,2|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.990130823680373,1.32558950291166,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.7932549921139,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0.468642863667593,0.624320153660641,0,1.64393548606981,0.352303495931295,0,0,1.63323337003915,1.10550885580591,1.96318984233954,0,0,0,0,1.5150250255866,1.12606667884768,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0,0.168776332241266,0,0,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0.69716365721711,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0.277765335475589,1.62904152655162,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.985326475791887,0,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94459580125936,0.500170521059677,0.542530047399471,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0.868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,1.80479845162965,0.462092022626489,0.784349769176855,2.92278449306521,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0,0,1.66215201785745,0.447749509444357,0,0,0.769350375349168,0.984043937099117,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,1.06428319221179,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.844016498463076,1.8922479853894,0,0,0.398495976502139,0,6.04638594850262,0,0,0,0,11.8153975285902,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,2.50345586228099,0,0,0,193.625463286481,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,0.468528891450678,0,0,0,0,2.41981432097328,0,0,1.35291077473043,0.829505531177977,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0.379864775735272,0,3.12619398980981,0,0,0,0,0,0,0,0,0,0,0,1.155802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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7960 | |||
|TSSclassifier=S | |||
|UniProt=F1D8P4,P51843 | |||
|association_with_transcript=-9bp_to_ENST00000453287,NM_000475,uc004dcf.3_5end | |||
|description=CAGE_peak_1_at_NR0B1_5end | |||
|id=chrX:30327504..30327509,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;1.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.16e-07,2;CL:0000008,1.16e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.14e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.75e-18;10!DOID:3095;1.42e-09;22!DOID:2994;1.42e-09;22!DOID:0050615;7.38e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.79e-18,10;DOID:0050687,1.78e-10,143;DOID:3095,1.46e-09,22;DOID:2994,1.46e-09,22;DOID:0050615,7.43e-08,16;DOID:162,5.01e-07,235;DOID:14566,9.76e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.98e-10!90;UBERON:0000073!1.61e-09!94;UBERON:0001016!1.61e-09!94;UBERON:0005743!3.69e-09!86;UBERON:0001049!5.44e-09!57;UBERON:0005068!5.44e-09!57;UBERON:0006241!5.44e-09!57;UBERON:0007135!5.44e-09!57;UBERON:0000033!5.99e-09!123;UBERON:0000153!8.01e-09!129;UBERON:0007811!8.01e-09!129;UBERON:0000475!1.18e-08!365;UBERON:0000924!1.71e-08!173;UBERON:0006601!1.71e-08!173;UBERON:0003075!4.84e-08!86;UBERON:0007284!4.84e-08!86;UBERON:0001017!5.17e-08!82;UBERON:0000955!1.36e-07!69;UBERON:0006238!1.36e-07!69;UBERON:0007023!5.52e-07!115;UBERON:0002616!7.01e-07!59;UBERON:0002780!7.79e-07!41;UBERON:0001890!7.79e-07!41;UBERON:0006240!7.79e-07!41;UBERON:0003056!8.20e-07!61;UBERON:0004121!8.87e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.32e-15;4!UBERON:0000923;1.32e-15;4!UBERON:0010316;1.32e-15;4!UBERON:0005291;1.32e-15;4!UBERON:0002050;1.74e-12;5!UBERON:0005423;1.74e-12;5!UBERON:0003714;5.78e-08;2!UBERON:0003566;1.14e-07;2!UBERON:0001777;1.14e-07;2!UBERON:0005162;1.92e-07;2!UBERON:0000122;1.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.79e-08,2;UBERON:0003566,1.16e-07,2;UBERON:0001777,1.16e-07,2;UBERON:0005162,2.35e-07,2;UBERON:0000122,2.35e-07,2 | |||
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|short_description=p1@NR0B1 | |||
}} |
Revision as of 11:42, 14 September 2013
Short description: | p1@NR0B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NR0B1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000453287, NM_000475, uc004dcf.3_5end |
EntrezGene: | NR0B1 |
HGNC: | 7960 |
UniProt: | F1D8P4P51843 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.16e-07 | 2 |
migratory cranial neural crest cell | 1.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.79e-08 | 2 |
head connective tissue | 1.16e-07 | 2 |
substantia propria of cornea | 1.16e-07 | 2 |
multi cell component structure | 2.35e-07 | 2 |
neuron projection bundle | 2.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.79e-18 | 10 |
cell type cancer | 1.78e-10 | 143 |
germ cell and embryonal cancer | 1.46e-09 | 22 |
germ cell cancer | 1.46e-09 | 22 |
respiratory system cancer | 7.43e-08 | 16 |
cancer | 5.01e-07 | 235 |
disease of cellular proliferation | 9.76e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.