FFCP PHASE1:Hg19::chrX:52897107..52897121,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=170626|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14618|TSSclassifier=S|UniProt=Q8WTP9|association_with_transcript=0bp_to_NM_133179,uc004drf.2_5end|coexpression_cluster_id=C50|description=CAGE_peak_1_at_XAGE3_5end|id=chrX:52897107..52897121,-|ontology_enrichment_celltype=CL:0002541!8.73e-25!3;CL:0000039!1.26e-10!7;CL:0000586!1.26e-10!7;CL:0002537!3.80e-07!5|ontology_enrichment_celltype_v019=CL:0002541;1.35e-50;3!CL:0000349;2.28e-14;19!CL:0000039;1.61e-10;7!CL:0000586;1.61e-10;7|ontology_enrichment_celltype_v019_2=CL:0002541,1.35e-50,3;CL:0000349,2.28e-14,19;CL:0000039,1.61e-10,7;CL:0000586,1.61e-10,7|ontology_enrichment_development_v019=UBERON:0003124;3.75e-18;1|ontology_enrichment_disease=DOID:1799!3.88e-09!1;DOID:10165!3.88e-09!1;DOID:1798!3.88e-09!1|ontology_enrichment_disease_v019=DOID:1799;1.57e-17;1!DOID:10165;1.57e-17;1!DOID:1798;1.57e-17;1|ontology_enrichment_disease_v019_2=DOID:1799,1.70e-17,1;DOID:10165,1.70e-17,1;DOID:1798,1.70e-17,1|ontology_enrichment_uberon=UBERON:0000476!8.73e-25!3;UBERON:0000920!8.73e-25!3;UBERON:0005631!5.21e-20!14;UBERON:0000158!5.21e-20!14;UBERON:0003124!1.15e-18!7;UBERON:0000478!1.80e-11!24|ontology_enrichment_uberon_v019=UBERON:0003124;1.35e-50;3!UBERON:0000920;1.35e-50;3!UBERON:0005631;6.35e-27;10!UBERON:0000158;6.35e-27;10!UBERON:0000478;1.93e-17;24|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.35e-50,3;UBERON:0003124,1.73e-38,7;UBERON:0005631,9.03e-30,14;UBERON:0000158,9.03e-30,14;UBERON:0000478,1.93e-17,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2045939968729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.883612786836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0818050769489,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,98.9119149824778,0.0897576444097721,82.8979447764922,205.436746867356,32.4255480642593,263.852214129224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05942647104339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.279507840705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p1@XAGE3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=170626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14618 | |||
|TSSclassifier=S | |||
|UniProt=Q8WTP9 | |||
|association_with_transcript=0bp_to_NM_133179,uc004drf.2_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_XAGE3_5end | |||
|id=chrX:52897107..52897121,- | |||
|ontology_enrichment_celltype=CL:0002541!8.73e-25!3;CL:0000039!1.26e-10!7;CL:0000586!1.26e-10!7;CL:0002537!3.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.35e-50;3!CL:0000349;2.28e-14;19!CL:0000039;1.61e-10;7!CL:0000586;1.61e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.35e-50,3;CL:0000349,2.28e-14,19;CL:0000039,1.61e-10,7;CL:0000586,1.61e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.75e-18;1 | |||
|ontology_enrichment_disease=DOID:1799!3.88e-09!1;DOID:10165!3.88e-09!1;DOID:1798!3.88e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.57e-17;1!DOID:10165;1.57e-17;1!DOID:1798;1.57e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.70e-17,1;DOID:10165,1.70e-17,1;DOID:1798,1.70e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.73e-25!3;UBERON:0000920!8.73e-25!3;UBERON:0005631!5.21e-20!14;UBERON:0000158!5.21e-20!14;UBERON:0003124!1.15e-18!7;UBERON:0000478!1.80e-11!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.35e-50;3!UBERON:0000920;1.35e-50;3!UBERON:0005631;6.35e-27;10!UBERON:0000158;6.35e-27;10!UBERON:0000478;1.93e-17;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.35e-50,3;UBERON:0003124,1.73e-38,7;UBERON:0005631,9.03e-30,14;UBERON:0000158,9.03e-30,14;UBERON:0000478,1.93e-17,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2045939968729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.883612786836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0818050769489,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,98.9119149824778,0.0897576444097721,82.8979447764922,205.436746867356,32.4255480642593,263.852214129224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05942647104339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.279507840705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@XAGE3 | |||
}} |
Revision as of 12:12, 14 September 2013
Short description: | p1@XAGE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_XAGE3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_NM_133179, uc004drf.2_5end |
EntrezGene: | XAGE3 |
HGNC: | 14618 |
UniProt: | Q8WTP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.35e-50 | 3 |
extraembryonic cell | 2.28e-14 | 19 |
germ line cell | 1.61e-10 | 7 |
germ cell | 1.61e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.35e-50 | 3 |
chorion | 1.73e-38 | 7 |
extraembryonic membrane | 9.03e-30 | 14 |
membranous layer | 9.03e-30 | 14 |
extraembryonic structure | 1.93e-17 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.70e-17 | 1 |
endocrine pancreas cancer | 1.70e-17 | 1 |
pancreatic endocrine carcinoma | 1.70e-17 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.