FFCP PHASE1:Hg19::chrX:53449844..53449863,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=158787|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26537|TSSclassifier=S|UniProt=Q8N443|association_with_transcript=5bp_to_ENST00000457095,NM_144968,uc004dsj.1,uc004dsk.2,uc011mog.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_1_at_RIBC1_5end|id=chrX:53449844..53449863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.29e-11!143;DOID:305!4.25e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.51e-12!94;UBERON:0001016!2.51e-12!94;UBERON:0005743!6.92e-12!86;UBERON:0002346!7.89e-12!90;UBERON:0003075!2.18e-11!86;UBERON:0007284!2.18e-11!86;UBERON:0001049!5.65e-11!57;UBERON:0005068!5.65e-11!57;UBERON:0006241!5.65e-11!57;UBERON:0007135!5.65e-11!57;UBERON:0001017!6.10e-11!82;UBERON:0007023!9.11e-11!115;UBERON:0002780!1.42e-09!41;UBERON:0001890!1.42e-09!41;UBERON:0006240!1.42e-09!41;UBERON:0003056!2.11e-09!61;UBERON:0000924!4.56e-09!173;UBERON:0006601!4.56e-09!173;UBERON:0003080!4.63e-09!42;UBERON:0000955!5.04e-09!69;UBERON:0006238!5.04e-09!69;UBERON:0004121!1.19e-08!169;UBERON:0002616!2.60e-08!59;UBERON:0000153!3.21e-07!129;UBERON:0007811!3.21e-07!129|ontology_enrichment_uberon_v019=UBERON:0003296;6.84e-09;4!UBERON:0010133;6.84e-09;4!UBERON:0000007;2.31e-08;2!UBERON:0000966;3.40e-07;5!UBERON:0005388;3.40e-07;5!UBERON:0001802;3.40e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.49e-09,4;UBERON:0010133,3.49e-09,4;UBERON:0000007,1.60e-08,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0,0.0787107813136792,1.57345710739562,1.15148819429164,0.77408061658038,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0.65156653411535,0,0,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0,1.32171328579026,0,0.526768169550154,0.393419540227666,0,0.616804496998528,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,1.00267582127178,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,7.53129684111848,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.662648841607426,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0.740707561268237,0.325808305310325,0,0,0.811512834825538,0.234817388471643,0,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0.207328115540772,1.00883967391873,0.50496973370552,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.394061520403854,0.215627574859517,0.513372145118994,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,0,0,0,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,0.219259876645935,0.261435451024901,1.02580050046556,0.656029291399411,0,0.9273691048295,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.709522128141196,0,0.987884678879706,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0.540031437238115,0,1.6023610669121,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=158787 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26537 | |||
|TSSclassifier=S | |||
|UniProt=Q8N443 | |||
|association_with_transcript=5bp_to_ENST00000457095,NM_144968,uc004dsj.1,uc004dsk.2,uc011mog.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_RIBC1_5end | |||
|id=chrX:53449844..53449863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.29e-11!143;DOID:305!4.25e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.51e-12!94;UBERON:0001016!2.51e-12!94;UBERON:0005743!6.92e-12!86;UBERON:0002346!7.89e-12!90;UBERON:0003075!2.18e-11!86;UBERON:0007284!2.18e-11!86;UBERON:0001049!5.65e-11!57;UBERON:0005068!5.65e-11!57;UBERON:0006241!5.65e-11!57;UBERON:0007135!5.65e-11!57;UBERON:0001017!6.10e-11!82;UBERON:0007023!9.11e-11!115;UBERON:0002780!1.42e-09!41;UBERON:0001890!1.42e-09!41;UBERON:0006240!1.42e-09!41;UBERON:0003056!2.11e-09!61;UBERON:0000924!4.56e-09!173;UBERON:0006601!4.56e-09!173;UBERON:0003080!4.63e-09!42;UBERON:0000955!5.04e-09!69;UBERON:0006238!5.04e-09!69;UBERON:0004121!1.19e-08!169;UBERON:0002616!2.60e-08!59;UBERON:0000153!3.21e-07!129;UBERON:0007811!3.21e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.84e-09;4!UBERON:0010133;6.84e-09;4!UBERON:0000007;2.31e-08;2!UBERON:0000966;3.40e-07;5!UBERON:0005388;3.40e-07;5!UBERON:0001802;3.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.49e-09,4;UBERON:0010133,3.49e-09,4;UBERON:0000007,1.60e-08,2 | |||
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| |||
|short_description=p1@RIBC1 | |||
}} |
Revision as of 12:14, 14 September 2013
Short description: | p1@RIBC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RIBC1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 5bp_to_ENST00000457095, NM_144968, uc004dsj.1, uc004dsk.2, uc011mog.1_5end |
EntrezGene: | RIBC1 |
HGNC: | 26537 |
UniProt: | Q8N443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.49e-09 | 4 |
neuroendocrine gland | 3.49e-09 | 4 |
pituitary gland | 1.60e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.