FFCP PHASE1:Mm9::chr7:4101973..4101978,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243813|HGNC=|MCL_coexpression_id=232|UniProt=Q8BTN6|association_with_transcript=-499bp_to_ENSMUST00000058358,NM_175529,uc009exd.1_5end|description=CAGE_peak_4_at_Leng9_5end|id=chr7:4101973..4101978,-|ontology_enrichment_celltype=CL:0002563!4.51e-17!9;CL:0002251!4.51e-17!9;CL:0000066!5.87e-12!25;CL:0000239!6.84e-12!6;CL:0000677!6.84e-12!6;CL:0000212!6.84e-12!6;CL:0000584!6.84e-12!6;CL:0000075!4.96e-10!7;CL:0000223!1.59e-09!20;CL:0002076!2.57e-09!15;CL:0002250!9.47e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,5.84e-61,9;CL:0002251,5.84e-61,9;CL:0000239,5.43e-41,6;CL:0000677,5.43e-41,6;CL:0000584,5.43e-41,6;CL:0002076,2.40e-36,15;CL:0000075,3.95e-35,7;CL:0000066,4.08e-32,25;CL:0000223,4.29e-27,20;CL:0002250,2.44e-21,3;CL:0000682,6.83e-10,3;CL:0002321,4.01e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.34e-26!15;UBERON:0000160!2.18e-25!43;UBERON:0001242!4.79e-23!13;UBERON:0000060!4.79e-23!13;UBERON:0001262!4.79e-23!13;UBERON:0004786!4.79e-23!13;UBERON:0005409!1.37e-20!59;UBERON:0003350!4.51e-17!9;UBERON:0004808!4.51e-17!9;UBERON:0001277!4.51e-17!9;UBERON:0004923!1.71e-14!24;UBERON:0000485!1.54e-13!11;UBERON:0001007!5.26e-10!128;UBERON:0001555!5.26e-10!128;UBERON:0007026!5.26e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0004921!1.09e-08!126;UBERON:0004185!1.09e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.84e-61,9;UBERON:0004808,5.84e-61,9;UBERON:0001277,5.84e-61,9;UBERON:0001242,1.66e-51,13;UBERON:0001262,1.66e-51,13;UBERON:0004786,1.66e-51,13;UBERON:0000485,8.87e-50,11;UBERON:0000344,1.51e-44,15;UBERON:0004923,1.48e-27,24;UBERON:0000160,3.84e-21,31;UBERON:0005409,1.25e-13,47;UBERON:0003929,2.51e-09,55;UBERON:0000490,1.29e-07,66;UBERON:0005911,3.06e-07,69|phase1_expression=0,6.2815573375085,5.45999087267443,3.93203474698879,8.01433167914156,2.01455126294268,1.86890112476421,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,1.72269589234506,2.15380998079537,0.430942465371778,0.380046838912748,1.00812051903972,0.665191531965914,0,0,0,6.93243887403059,1.32987716286794,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p4@Leng9}} | ||
|EntrezGene=243813 | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|UniProt=Q8BTN6 | |||
|association_with_transcript=-499bp_to_ENSMUST00000058358,NM_175529,uc009exd.1_5end | |||
|description=CAGE_peak_4_at_Leng9_5end | |||
|id=chr7:4101973..4101978,- | |||
|ontology_enrichment_celltype=CL:0002563!4.51e-17!9;CL:0002251!4.51e-17!9;CL:0000066!5.87e-12!25;CL:0000239!6.84e-12!6;CL:0000677!6.84e-12!6;CL:0000212!6.84e-12!6;CL:0000584!6.84e-12!6;CL:0000075!4.96e-10!7;CL:0000223!1.59e-09!20;CL:0002076!2.57e-09!15;CL:0002250!9.47e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.84e-61,9;CL:0002251,5.84e-61,9;CL:0000239,5.43e-41,6;CL:0000677,5.43e-41,6;CL:0000584,5.43e-41,6;CL:0002076,2.40e-36,15;CL:0000075,3.95e-35,7;CL:0000066,4.08e-32,25;CL:0000223,4.29e-27,20;CL:0002250,2.44e-21,3;CL:0000682,6.83e-10,3;CL:0002321,4.01e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.34e-26!15;UBERON:0000160!2.18e-25!43;UBERON:0001242!4.79e-23!13;UBERON:0000060!4.79e-23!13;UBERON:0001262!4.79e-23!13;UBERON:0004786!4.79e-23!13;UBERON:0005409!1.37e-20!59;UBERON:0003350!4.51e-17!9;UBERON:0004808!4.51e-17!9;UBERON:0001277!4.51e-17!9;UBERON:0004923!1.71e-14!24;UBERON:0000485!1.54e-13!11;UBERON:0001007!5.26e-10!128;UBERON:0001555!5.26e-10!128;UBERON:0007026!5.26e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0004921!1.09e-08!126;UBERON:0004185!1.09e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.84e-61,9;UBERON:0004808,5.84e-61,9;UBERON:0001277,5.84e-61,9;UBERON:0001242,1.66e-51,13;UBERON:0001262,1.66e-51,13;UBERON:0004786,1.66e-51,13;UBERON:0000485,8.87e-50,11;UBERON:0000344,1.51e-44,15;UBERON:0004923,1.48e-27,24;UBERON:0000160,3.84e-21,31;UBERON:0005409,1.25e-13,47;UBERON:0003929,2.51e-09,55;UBERON:0000490,1.29e-07,66;UBERON:0005911,3.06e-07,69 | |||
|phase1_expression=0,6.2815573375085,5.45999087267443,3.93203474698879,8.01433167914156,2.01455126294268,1.86890112476421,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,1.72269589234506,2.15380998079537,0.430942465371778,0.380046838912748,1.00812051903972,0.665191531965914,0,0,0,6.93243887403059,1.32987716286794,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Leng9 | |||
}} |
Revision as of 13:26, 14 September 2013
Short description: | p4@Leng9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Leng9_5end |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | -499bp_to_ENSMUST00000058358, NM_175529, uc009exd.1_5end |
EntrezGene: | Leng9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.84e-61 | 9 |
epithelial cell of alimentary canal | 5.84e-61 | 9 |
brush border epithelial cell | 5.43e-41 | 6 |
gut absorptive cell | 5.43e-41 | 6 |
enterocyte | 5.43e-41 | 6 |
endo-epithelial cell | 2.40e-36 | 15 |
columnar/cuboidal epithelial cell | 3.95e-35 | 7 |
epithelial cell | 4.08e-32 | 25 |
endodermal cell | 4.29e-27 | 20 |
intestinal crypt stem cell | 2.44e-21 | 3 |
M cell of gut | 6.83e-10 | 3 |
embryonic cell | 4.01e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.84e-61 | 9 |
gastrointestinal system epithelium | 5.84e-61 | 9 |
intestinal epithelium | 5.84e-61 | 9 |
intestinal mucosa | 1.66e-51 | 13 |
wall of intestine | 1.66e-51 | 13 |
gastrointestinal system mucosa | 1.66e-51 | 13 |
simple columnar epithelium | 8.87e-50 | 11 |
mucosa | 1.51e-44 | 15 |
organ component layer | 1.48e-27 | 24 |
intestine | 3.84e-21 | 31 |
gastrointestinal system | 1.25e-13 | 47 |
gut epithelium | 2.51e-09 | 55 |
unilaminar epithelium | 1.29e-07 | 66 |
endo-epithelium | 3.06e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.