Personal tools

FFCP PHASE1:Mm9::chr8:107058530..107058546,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=234664|HGNC=|MCL_coexpression_id=17|UniProt=Q8VBW6,E0CZE0,Q3UK27|association_with_transcript=0bp_to_ENSMUST00000034349,ENSMUST00000162466,NM_144931,uc009nas.2_5end|description=CAGE_peak_2_at_Nae1_5end|id=chr8:107058530..107058546,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.72e-09!63;UBERON:0002346!6.39e-08!71;UBERON:0003075!6.39e-08!71;UBERON:0007284!6.39e-08!71;UBERON:0003056!5.90e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.73e-10,92;UBERON:0002346,3.29e-09,64;UBERON:0003075,3.29e-09,64;UBERON:0007284,3.29e-09,64;UBERON:0010371,2.76e-08,73;UBERON:0000073,1.92e-07,54;UBERON:0003056,6.01e-07,49|phase1_expression=7.68714466103011,4.18770489167233,1.81999695755814,3.0246421130683,1.50268718983904,1.6787927191189,2.56973904655078,4.00282302668886,3.66050677594334,2.57470978954193,2.05461561870606,1.59544317990673,4.45121897821135,2.79745287740792,3.66420737997229,3.84703008040669,4.19737126876888,3.3123527362615,4.2505474417779,6.36584477697045,12.3312770719051,2.87943758482567,1.82839852397255,3.19984845586813,4.12936705920906,3.44539178469012,2.58457197695445,2.15471232685889,3.99049180858385,3.2763916868791,2.43903561720835,2.54012269383853,1.23012957516914,0,3.75507105676657,2.1610503896604,3.06254034393554,2.92972141515835,5.4693474116666,4.18818995179039,2.94115744015507,4.09827290975067,2.91306211818692,4.65818226509636,4.35920804243913,4.03802854755699,0.782391344348039,0.65407546914134,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,5.36904339384756,4.35217285206807,4.7053131879945,3.60163210450326,4.01146815914259,5.15672092277442,2.63011399117477,1.05798195854407,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,0,0.299600110518405,0.384218305321555,4.66603255388149,2.16009501330705,2.94454945891935,4.85606673486466,4.19650227808066,4.16468717330844,2.49198224647415,2.75765635983006,9.91042928994498,8.2996769755372,8.60196586234964,2.2420668914133,1.37231465403614,5.2091337055676,6.14202597803038,10.1297269805702,11.4598685832608,6.77645746589436,7.68807076315156,7.26957838718672,5.75519069332199,5.44115232768856,3.18850937571846,3.44169550792555,4.0798280022465,3.2382191498269,1.94932925234301,7.6164570806547,3.65155492342555,5.11290967734173,2.85764605063156,3.18005617059306,5.21120653173718,1.28326477414318,5.09610479413291,14.2213340630666,6.71122227134764,5.57391704045217,2.52762222507392,3.31133251185274,5.17875767294343,4.89859058913922,2.4287945747259,2.43572382649713,2.53677046981664,4.22023393547343,5.87943535678524,3.39299796590124,4.94389935468748,2.60278842455841,1.76922110389975,5.82360659810673,3.75430581382669,4.84875253135222,1.86391761218122,10.5401086924157,13.1951425292477,4.85368404896324,4.79260498023681,3.59941638596045,4.44745794755726,9.8861822007183,6.8625090422794,13.6963243803022,5.56237824615285,7.41574826257959,8.10373373782284,10.058958310201,7.33243419722277,3.6078021476927,3.53811861807145,5.26104639716185,4.81445638962004,5.0578462975364,5.58192602396583,6.32960234910003,8.84474488967262,7.30248205623644,7.30873451565885,6.72628763921441,4.095791865724,6.24050064553804,8.79755620819744,4.82230611340665,4.44875598760957,4.179025998266,2.88094990971121,4.77682240364384,2.1066395619397,3.86021860672073,4.26245249093389,5.17814431338755,4.22146907965973,3.6012412292203,5.44512891845984,4.13204886669548,4.47374627373397,3.95307706075693,4.02410102099429,7.70651259623319,5.59503489705834,6.07419617092652,6.16122952548504,6.57899943413995,6.58650345873152,6.57611451925822,8.41159794256509,12.657267322652,2.64335026387038,2.3800550999719,4.69234151177515,5.10920678092965,4.12375876230699,3.83198696784351,2.2237804384487,3.42406127002606,1.42358718463353,4.28217282282428,3.2673577144035,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,3.38540164532424,2.27601481143698,4.22719496655997,1.1270773567308,4.88763186828754,2.90928730751439,6.73303870947058,4.93244989569207,4.87113488332687,6.75094529717912,3.45512058981041,2.96452627087149,2.66952169145751,2.16214894624523,2.47348323623339,3.44862206360455,1.4470629585145,1.01850340712568,1.72617682470486,3.08056930872567,1.64736847912849,5.75072826109418,1.86070473834252,3.12037673114561,1.51547326768267,3.22915344339442,5.78932225636041,3.51031061316549,7.20067364727842,6.19266910479698,3.90413697282933,3.28566347603903,4.85768146581266,3.33261097240419,6.24427673144956,4.72905432318573,5.97954662051692,4.30527875375215,3.93271955317771,3.10832967358612,5.20736610893442,3.01582567878545,4.89515115436839,1.96705709207614,1.37968373152366,9.9541365792431,13.1277088983268,2.95082901678016,7.32165688892682,5.36363973007636,4.29482618726302,4.73931475012158,4.06246956519338,5.34716817797746,4.81230102341015,4.04810701674894,3.79932615284705,3.95287777946523,6.74774764485795,4.40014264145633,3.20518086601059,7.81857404897165,4.61916344323099,2.65490276679926,3.15614827001476,3.02323556964751,3.20628635585027,1.18120757152309,3.07435147943927,4.39328098385976,4.36240475373007,4.63446591900138,1.8962205476149,4.21674434299995,2.06271086496374,8.5109901438447,5.58189391497062,1.03486947026204,7.50179622610573,5.14286677562593,5.52943334566419,3.62007845324666,3.04464949114599,1.87737366450968,3.38931313382112,3.08739757276947,2.80306630000516,4.52100394748536,5.00597276903694,4.17803204010978,4.43180429311665,2.91480836629851,11.1255181206306,1.53783792718067,2.06386867963222,2.96311243791539,2.26042148405629,2.1871076435364,3.43167259809784,6.28920190977265,5.59805809294632,5.66619892598138,0,5.53587988766987,4.06638934253697,4.53622431451565,3.3454127362315,2.18362563746178,3.9110660451598,5.37247462214684,2.6175594198403,3.11075935900303,3.10669656543463,54.1145221136823,6.13017838780313,6.9492565991981,10.5003641705786,10.2036260547408,7.26511339610346,9.85800804624333,9.89553324814021,13.9462928086195,55.3227636691554,44.932680976227,4.74016680942267,3.85177909051312,2.77319584345034,3.50786222040047,3.04345382634718,3.3775830312815,5.04820887983869,3.83992770653901,3.02899349844443,4.87723562591999,4.03304740547362,2.33898913775406,3.75226182397285,4.55819918508119,4.53460767230423,5.32766288097755,4.75483440030221,4.53288464183012,4.63655025677257,2.064507229963,2.38097111547445,3.00115730710692,2.50786052017682,6.7770221114048,9.20650473014354,5.15605962095457,7.38968684077857,6.16574267793578,15.107877947794,7.42524750254986,9.45674526770863,7.25027854374727,12.4262474820437,6.01966615988225,2.39414924040619,3.75613932659095,5.10524105843418,4.61148957781561,4.22840069435032,2.66696073361938,4.53277125925567,2.88827288632634,4.80124702351215,4.81610669791456,5.28153755881013,5.05664140337365,4.03358460150676,4.59483751644906,3.81034953026459,3.59241410429052,5.78727661391115,3.70877310722976,4.71036544430071,4.11443102862498,3.72699192934609,5.24559617884106,4.36039249896986,5.36423468367385,3.72304274723377,3.65855945745545,6.05060336307039,3.93831930152999,6.17256498823512,4.62676570684279,4.82671963640261,6.54769669071503,4.95797891795091,2.50778594275484,5.74564329257276,4.67863216890817,5.58664740525576,8.22539827896026,3.08827986767322,6.4922993973718|short_description=p2@Nae1}}
|EntrezGene=234664
|HGNC=
|MCL_coexpression_id=17
|UniProt=Q8VBW6,E0CZE0,Q3UK27
|association_with_transcript=0bp_to_ENSMUST00000034349,ENSMUST00000162466,NM_144931,uc009nas.2_5end
|description=CAGE_peak_2_at_Nae1_5end
|id=chr8:107058530..107058546,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.72e-09!63;UBERON:0002346!6.39e-08!71;UBERON:0003075!6.39e-08!71;UBERON:0007284!6.39e-08!71;UBERON:0003056!5.90e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.73e-10,92;UBERON:0002346,3.29e-09,64;UBERON:0003075,3.29e-09,64;UBERON:0007284,3.29e-09,64;UBERON:0010371,2.76e-08,73;UBERON:0000073,1.92e-07,54;UBERON:0003056,6.01e-07,49
|phase1_expression=7.68714466103011,4.18770489167233,1.81999695755814,3.0246421130683,1.50268718983904,1.6787927191189,2.56973904655078,4.00282302668886,3.66050677594334,2.57470978954193,2.05461561870606,1.59544317990673,4.45121897821135,2.79745287740792,3.66420737997229,3.84703008040669,4.19737126876888,3.3123527362615,4.2505474417779,6.36584477697045,12.3312770719051,2.87943758482567,1.82839852397255,3.19984845586813,4.12936705920906,3.44539178469012,2.58457197695445,2.15471232685889,3.99049180858385,3.2763916868791,2.43903561720835,2.54012269383853,1.23012957516914,0,3.75507105676657,2.1610503896604,3.06254034393554,2.92972141515835,5.4693474116666,4.18818995179039,2.94115744015507,4.09827290975067,2.91306211818692,4.65818226509636,4.35920804243913,4.03802854755699,0.782391344348039,0.65407546914134,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,5.36904339384756,4.35217285206807,4.7053131879945,3.60163210450326,4.01146815914259,5.15672092277442,2.63011399117477,1.05798195854407,1.26766280701236,0.677689064138264,1.77858959222228,0.899899717281399,0.988866362566974,0,0.299600110518405,0.384218305321555,4.66603255388149,2.16009501330705,2.94454945891935,4.85606673486466,4.19650227808066,4.16468717330844,2.49198224647415,2.75765635983006,9.91042928994498,8.2996769755372,8.60196586234964,2.2420668914133,1.37231465403614,5.2091337055676,6.14202597803038,10.1297269805702,11.4598685832608,6.77645746589436,7.68807076315156,7.26957838718672,5.75519069332199,5.44115232768856,3.18850937571846,3.44169550792555,4.0798280022465,3.2382191498269,1.94932925234301,7.6164570806547,3.65155492342555,5.11290967734173,2.85764605063156,3.18005617059306,5.21120653173718,1.28326477414318,5.09610479413291,14.2213340630666,6.71122227134764,5.57391704045217,2.52762222507392,3.31133251185274,5.17875767294343,4.89859058913922,2.4287945747259,2.43572382649713,2.53677046981664,4.22023393547343,5.87943535678524,3.39299796590124,4.94389935468748,2.60278842455841,1.76922110389975,5.82360659810673,3.75430581382669,4.84875253135222,1.86391761218122,10.5401086924157,13.1951425292477,4.85368404896324,4.79260498023681,3.59941638596045,4.44745794755726,9.8861822007183,6.8625090422794,13.6963243803022,5.56237824615285,7.41574826257959,8.10373373782284,10.058958310201,7.33243419722277,3.6078021476927,3.53811861807145,5.26104639716185,4.81445638962004,5.0578462975364,5.58192602396583,6.32960234910003,8.84474488967262,7.30248205623644,7.30873451565885,6.72628763921441,4.095791865724,6.24050064553804,8.79755620819744,4.82230611340665,4.44875598760957,4.179025998266,2.88094990971121,4.77682240364384,2.1066395619397,3.86021860672073,4.26245249093389,5.17814431338755,4.22146907965973,3.6012412292203,5.44512891845984,4.13204886669548,4.47374627373397,3.95307706075693,4.02410102099429,7.70651259623319,5.59503489705834,6.07419617092652,6.16122952548504,6.57899943413995,6.58650345873152,6.57611451925822,8.41159794256509,12.657267322652,2.64335026387038,2.3800550999719,4.69234151177515,5.10920678092965,4.12375876230699,3.83198696784351,2.2237804384487,3.42406127002606,1.42358718463353,4.28217282282428,3.2673577144035,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,3.38540164532424,2.27601481143698,4.22719496655997,1.1270773567308,4.88763186828754,2.90928730751439,6.73303870947058,4.93244989569207,4.87113488332687,6.75094529717912,3.45512058981041,2.96452627087149,2.66952169145751,2.16214894624523,2.47348323623339,3.44862206360455,1.4470629585145,1.01850340712568,1.72617682470486,3.08056930872567,1.64736847912849,5.75072826109418,1.86070473834252,3.12037673114561,1.51547326768267,3.22915344339442,5.78932225636041,3.51031061316549,7.20067364727842,6.19266910479698,3.90413697282933,3.28566347603903,4.85768146581266,3.33261097240419,6.24427673144956,4.72905432318573,5.97954662051692,4.30527875375215,3.93271955317771,3.10832967358612,5.20736610893442,3.01582567878545,4.89515115436839,1.96705709207614,1.37968373152366,9.9541365792431,13.1277088983268,2.95082901678016,7.32165688892682,5.36363973007636,4.29482618726302,4.73931475012158,4.06246956519338,5.34716817797746,4.81230102341015,4.04810701674894,3.79932615284705,3.95287777946523,6.74774764485795,4.40014264145633,3.20518086601059,7.81857404897165,4.61916344323099,2.65490276679926,3.15614827001476,3.02323556964751,3.20628635585027,1.18120757152309,3.07435147943927,4.39328098385976,4.36240475373007,4.63446591900138,1.8962205476149,4.21674434299995,2.06271086496374,8.5109901438447,5.58189391497062,1.03486947026204,7.50179622610573,5.14286677562593,5.52943334566419,3.62007845324666,3.04464949114599,1.87737366450968,3.38931313382112,3.08739757276947,2.80306630000516,4.52100394748536,5.00597276903694,4.17803204010978,4.43180429311665,2.91480836629851,11.1255181206306,1.53783792718067,2.06386867963222,2.96311243791539,2.26042148405629,2.1871076435364,3.43167259809784,6.28920190977265,5.59805809294632,5.66619892598138,0,5.53587988766987,4.06638934253697,4.53622431451565,3.3454127362315,2.18362563746178,3.9110660451598,5.37247462214684,2.6175594198403,3.11075935900303,3.10669656543463,54.1145221136823,6.13017838780313,6.9492565991981,10.5003641705786,10.2036260547408,7.26511339610346,9.85800804624333,9.89553324814021,13.9462928086195,55.3227636691554,44.932680976227,4.74016680942267,3.85177909051312,2.77319584345034,3.50786222040047,3.04345382634718,3.3775830312815,5.04820887983869,3.83992770653901,3.02899349844443,4.87723562591999,4.03304740547362,2.33898913775406,3.75226182397285,4.55819918508119,4.53460767230423,5.32766288097755,4.75483440030221,4.53288464183012,4.63655025677257,2.064507229963,2.38097111547445,3.00115730710692,2.50786052017682,6.7770221114048,9.20650473014354,5.15605962095457,7.38968684077857,6.16574267793578,15.107877947794,7.42524750254986,9.45674526770863,7.25027854374727,12.4262474820437,6.01966615988225,2.39414924040619,3.75613932659095,5.10524105843418,4.61148957781561,4.22840069435032,2.66696073361938,4.53277125925567,2.88827288632634,4.80124702351215,4.81610669791456,5.28153755881013,5.05664140337365,4.03358460150676,4.59483751644906,3.81034953026459,3.59241410429052,5.78727661391115,3.70877310722976,4.71036544430071,4.11443102862498,3.72699192934609,5.24559617884106,4.36039249896986,5.36423468367385,3.72304274723377,3.65855945745545,6.05060336307039,3.93831930152999,6.17256498823512,4.62676570684279,4.82671963640261,6.54769669071503,4.95797891795091,2.50778594275484,5.74564329257276,4.67863216890817,5.58664740525576,8.22539827896026,3.08827986767322,6.4922993973718
|short_description=p2@Nae1
}}

Revision as of 14:33, 14 September 2013

Short description:p2@Nae1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nae1_5end
Coexpression cluster:MCL_coexpression_mm9:17
Association with transcript: 0bp_to_ENSMUST00000034349, ENSMUST00000162466, NM_144931, uc009nas.2_5end
EntrezGene:Nae1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Nae1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C68.84
eyeball, neonate N01.CNhs11140.1532-43E77.30
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H26.24
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E37.71
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G16.16
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A313.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H35.01
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A95.37
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G554.11
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G510.50
testis, embryo E17.CNhs11029.486-18I510.20
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D913.95
testis, neonate N20.CNhs11110.839-18H355.32
testis, neonate N30.CNhs11130.1391-42E244.93
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F85.05
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D34.88
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.