FFCP PHASE1:Mm9::chr8:67653273..67653282,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=74|UniProt=Q3V2G4|association_with_transcript=-51bp_to_ENSMUST00000098713_5end|description=CAGE_peak_4_at_ENSMUST00000098713_5end|id=chr8:67653273..67653282,-|ontology_enrichment_celltype=CL:0002563!5.04e-10!9;CL:0002251!5.04e-10!9;CL:0000239!9.41e-10!6;CL:0000677!9.41e-10!6;CL:0000212!9.41e-10!6;CL:0000584!9.41e-10!6;CL:0000075!3.37e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-20,6;CL:0000677,1.22e-20,6;CL:0000584,1.22e-20,6;CL:0000075,1.26e-17,7;CL:0002563,1.33e-13,9;CL:0002251,1.33e-13,9;CL:0000682,1.57e-11,3;CL:0000066,3.89e-10,25;CL:0002076,5.96e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.96e-25!59;UBERON:0000160!5.86e-24!43;UBERON:0000344!4.06e-18!15;UBERON:0001242!1.75e-15!13;UBERON:0000060!1.75e-15!13;UBERON:0001262!1.75e-15!13;UBERON:0004786!1.75e-15!13;UBERON:0001007!3.98e-11!128;UBERON:0001555!3.98e-11!128;UBERON:0007026!3.98e-11!128;UBERON:0004119!8.88e-11!130;UBERON:0000925!8.88e-11!130;UBERON:0006595!8.88e-11!130;UBERON:0003350!5.04e-10!9;UBERON:0004808!5.04e-10!9;UBERON:0001277!5.04e-10!9;UBERON:0004923!8.23e-10!24;UBERON:0004921!9.08e-10!126;UBERON:0004185!9.08e-10!126;UBERON:0000485!7.01e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-38,31;UBERON:0005409,3.51e-30,47;UBERON:0000344,2.26e-22,15;UBERON:0001242,6.31e-21,13;UBERON:0001262,6.31e-21,13;UBERON:0004786,6.31e-21,13;UBERON:0003350,1.33e-13,9;UBERON:0004808,1.33e-13,9;UBERON:0001277,1.33e-13,9;UBERON:0004923,2.36e-13,24;UBERON:0001007,2.79e-11,116;UBERON:0001555,2.79e-11,116;UBERON:0007026,2.79e-11,116;UBERON:0000485,4.89e-11,11;UBERON:0004119,5.06e-11,118;UBERON:0000925,5.06e-11,118;UBERON:0006595,5.06e-11,118;UBERON:0004921,3.23e-10,114;UBERON:0002108,8.16e-09,4|phase1_expression=0,2.44282785347553,2.27499619694768,1.51232105653415,1.50268718983904,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,2.75291137280604,2.29692785646008,4.30761996159075,1.29282739611533,1.71021077510736,2.26827116783938,0.886922042621219,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.951128130562796,2.84717436926707,0.988193728344065,2.5133520880027,1.98956472041151,1.55971269695296,5.39291645192533,1.08069024937347,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0,0.539457385539283,0.330613822901344,1.04702376793612,2.46268449254406,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.64183841918363,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p4@ENSMUST00000098713}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=Q3V2G4 | |||
|association_with_transcript=-51bp_to_ENSMUST00000098713_5end | |||
|description=CAGE_peak_4_at_ENSMUST00000098713_5end | |||
|id=chr8:67653273..67653282,- | |||
|ontology_enrichment_celltype=CL:0002563!5.04e-10!9;CL:0002251!5.04e-10!9;CL:0000239!9.41e-10!6;CL:0000677!9.41e-10!6;CL:0000212!9.41e-10!6;CL:0000584!9.41e-10!6;CL:0000075!3.37e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-20,6;CL:0000677,1.22e-20,6;CL:0000584,1.22e-20,6;CL:0000075,1.26e-17,7;CL:0002563,1.33e-13,9;CL:0002251,1.33e-13,9;CL:0000682,1.57e-11,3;CL:0000066,3.89e-10,25;CL:0002076,5.96e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.96e-25!59;UBERON:0000160!5.86e-24!43;UBERON:0000344!4.06e-18!15;UBERON:0001242!1.75e-15!13;UBERON:0000060!1.75e-15!13;UBERON:0001262!1.75e-15!13;UBERON:0004786!1.75e-15!13;UBERON:0001007!3.98e-11!128;UBERON:0001555!3.98e-11!128;UBERON:0007026!3.98e-11!128;UBERON:0004119!8.88e-11!130;UBERON:0000925!8.88e-11!130;UBERON:0006595!8.88e-11!130;UBERON:0003350!5.04e-10!9;UBERON:0004808!5.04e-10!9;UBERON:0001277!5.04e-10!9;UBERON:0004923!8.23e-10!24;UBERON:0004921!9.08e-10!126;UBERON:0004185!9.08e-10!126;UBERON:0000485!7.01e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.08e-38,31;UBERON:0005409,3.51e-30,47;UBERON:0000344,2.26e-22,15;UBERON:0001242,6.31e-21,13;UBERON:0001262,6.31e-21,13;UBERON:0004786,6.31e-21,13;UBERON:0003350,1.33e-13,9;UBERON:0004808,1.33e-13,9;UBERON:0001277,1.33e-13,9;UBERON:0004923,2.36e-13,24;UBERON:0001007,2.79e-11,116;UBERON:0001555,2.79e-11,116;UBERON:0007026,2.79e-11,116;UBERON:0000485,4.89e-11,11;UBERON:0004119,5.06e-11,118;UBERON:0000925,5.06e-11,118;UBERON:0006595,5.06e-11,118;UBERON:0004921,3.23e-10,114;UBERON:0002108,8.16e-09,4 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,1.51232105653415,1.50268718983904,2.01455126294268,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,2.75291137280604,2.29692785646008,4.30761996159075,1.29282739611533,1.71021077510736,2.26827116783938,0.886922042621219,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,1.05780226665418,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.951128130562796,2.84717436926707,0.988193728344065,2.5133520880027,1.98956472041151,1.55971269695296,5.39291645192533,1.08069024937347,4.38110801159608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0,0.539457385539283,0.330613822901344,1.04702376793612,2.46268449254406,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.64183841918363,0,0,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p4@ENSMUST00000098713 | |||
}} |
Revision as of 15:52, 14 September 2013
Short description: | p4@ENSMUST00000098713 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENSMUST00000098713_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | -51bp_to_ENSMUST00000098713_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.22e-20 | 6 |
gut absorptive cell | 1.22e-20 | 6 |
enterocyte | 1.22e-20 | 6 |
columnar/cuboidal epithelial cell | 1.26e-17 | 7 |
intestinal epithelial cell | 1.33e-13 | 9 |
epithelial cell of alimentary canal | 1.33e-13 | 9 |
M cell of gut | 1.57e-11 | 3 |
epithelial cell | 3.89e-10 | 25 |
endo-epithelial cell | 5.96e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.08e-38 | 31 |
gastrointestinal system | 3.51e-30 | 47 |
mucosa | 2.26e-22 | 15 |
intestinal mucosa | 6.31e-21 | 13 |
wall of intestine | 6.31e-21 | 13 |
gastrointestinal system mucosa | 6.31e-21 | 13 |
epithelium of mucosa | 1.33e-13 | 9 |
gastrointestinal system epithelium | 1.33e-13 | 9 |
intestinal epithelium | 1.33e-13 | 9 |
organ component layer | 2.36e-13 | 24 |
digestive system | 2.79e-11 | 116 |
digestive tract | 2.79e-11 | 116 |
primitive gut | 2.79e-11 | 116 |
simple columnar epithelium | 4.89e-11 | 11 |
endoderm-derived structure | 5.06e-11 | 118 |
endoderm | 5.06e-11 | 118 |
presumptive endoderm | 5.06e-11 | 118 |
subdivision of digestive tract | 3.23e-10 | 114 |
small intestine | 8.16e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.