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FFCP PHASE1:Mm9::chr8:96910386..96910409,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=64209|HGNC=|MCL_coexpression_id=693|UniProt=Q8C4N0,Q3TMN9,Q9JJK5|association_with_transcript=0bp_to_ENSMUST00000034220,NM_022331,uc009mwg.1,uc009mwh.1_5end|description=CAGE_peak_1_at_Herpud1_5end|id=chr8:96910386..96910409,+|ontology_enrichment_celltype=CL:0000063!1.42e-08!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.23e-13!130;UBERON:0000925!2.23e-13!130;UBERON:0006595!2.23e-13!130;UBERON:0001007!5.16e-13!128;UBERON:0001555!5.16e-13!128;UBERON:0007026!5.16e-13!128;UBERON:0004921!2.21e-12!126;UBERON:0004185!2.21e-12!126;UBERON:0000160!1.56e-10!43;UBERON:0005409!1.18e-09!59;UBERON:0002107!7.82e-09!22;UBERON:0007499!7.82e-09!22;UBERON:0006925!7.82e-09!22;UBERON:0009497!7.82e-09!22;UBERON:0000015!7.82e-09!22;UBERON:0002423!7.82e-09!22;UBERON:0006235!7.82e-09!22;UBERON:0008835!7.82e-09!22;UBERON:0003894!7.82e-09!22;UBERON:0004161!7.82e-09!22;UBERON:0008836!7.82e-09!22;UBERON:0009854!1.73e-08!23;UBERON:0009856!1.73e-08!23;UBERON:0002365!6.72e-08!25;UBERON:0002330!6.72e-08!25;UBERON:0002108!1.77e-07!16;UBERON:0000077!5.32e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.77e-09,118;UBERON:0000925,4.77e-09,118;UBERON:0006595,4.77e-09,118;UBERON:0002107,7.82e-09,22;UBERON:0007499,7.82e-09,22;UBERON:0006925,7.82e-09,22;UBERON:0009497,7.82e-09,22;UBERON:0000015,7.82e-09,22;UBERON:0002423,7.82e-09,22;UBERON:0006235,7.82e-09,22;UBERON:0008835,7.82e-09,22;UBERON:0003894,7.82e-09,22;UBERON:0004161,7.82e-09,22;UBERON:0008836,7.82e-09,22;UBERON:0001007,9.55e-09,116;UBERON:0001555,9.55e-09,116;UBERON:0007026,9.55e-09,116;UBERON:0009854,1.73e-08,23;UBERON:0009856,1.73e-08,23;UBERON:0004921,3.16e-08,114;UBERON:0002365,6.72e-08,25;UBERON:0002330,6.72e-08,25;UBERON:0002100,2.04e-07,90;UBERON:0005256,4.59e-07,45|phase1_expression=46.1228679661807,447.386472593661,514.604139749565,737.710211377358,1034.34968233921,287.073554969332,267.720086122472,106.655865162742,505.431512524484,434.657825379942,174.128673685339,116.228035656205,77.382729928905,96.5121242705731,95.2693918792795,142.542588242437,132.21719496622,185.176291065286,172.352843042414,206.677760425641,153.928355173436,176.14214743037,158.809471796473,165.112180322796,183.98624341587,353.726889894852,486.330293663595,260.289249084554,149.548431112166,174.404849793872,397.341075094306,113.670490549274,98.4103660135312,47.5445043046316,97.6318474759308,92.0939935286048,110.251452381679,103.795844422753,96.8855827209512,68.0580867165938,151.175492423971,152.319143145733,92.2469670759192,96.3110657513166,85.9676376741483,38.7283647061148,49.2906546939265,35.1020501772519,51.6262529426009,58.1345398232107,27.4373386385711,33.0630898039435,113.924389513203,94.2970784614748,72.9323544139147,128.886977454009,96.8483026992998,93.8523207944945,28.3243045203437,39.6743234454025,28.5224131577781,34.9009868031206,36.4610866405567,87.7402224349364,107.7864335198,88.0995342533164,43.7416161356871,53.0221261343745,15.9682002955056,21.8709620097339,20.6118462124354,35.9920240348793,45.4989194360324,23.2732518508413,20.5109307979026,26.6573448116906,110.115880999389,68.8234752279162,90.4742480879274,34.1585485221202,31.7462123300361,40.1103295328705,87.942644685435,73.7219019141501,90.914957427202,34.4715445004191,32.7454865837937,33.5519002485541,26.731346246614,26.7523322778021,292.183404611291,1225.24360082149,1981.43646642439,1197.06167905268,1226.7778761412,1507.16244819544,296.61861531826,63.9113709667717,76.8966573624492,75.6146689452128,49.1543535020615,68.0130330295885,147.787039029854,71.1066703153331,36.5869859308952,34.2035818391383,42.4640533812418,678.023877771778,178.667139716548,88.1746306045059,37.1258599279531,41.1028395721391,51.8884868826132,49.2863034607076,58.7943535678524,54.2879674544198,276.116778959296,124.355446951124,137.99924610418,69.2362117774911,107.108136453291,93.5809238550979,68.9649516507052,46.8449275218475,44.193255137639,245.238773000248,414.440515665978,280.754478104915,300.775227481944,86.2794082971779,49.4100651044117,31.4135880282161,50.930525816337,38.1016031422192,75.2192721305608,58.5690959674605,42.4670147255819,124.531377580703,189.036623308389,102.274741960826,26.0240885925407,28.0480567408837,35.8323638312645,50.3354091571288,42.7949579661852,35.3593867986185,36.9184794765332,84.0785954901801,17.8921434134259,25.5293208226556,22.5217438929855,33.3177513289914,37.2583313962301,45.969285980926,62.1462051951989,26.4715574868596,233.836991375307,260.436082000092,241.823137985649,39.7681483268164,38.931325956862,42.8547706277215,44.7447550256047,45.8460659971451,62.4781807193882,72.0855228726264,64.9221631387078,93.8793352632043,72.0772142621044,86.6804210337623,136.600944084767,137.135588204962,105.164505224413,230.566627430319,35.5390013073375,29.8423375899925,239.884036446237,222.667377130704,21.3288250535234,27.1716906076713,38.5313709353059,71.5976512412866,105.184814738624,97.2052949435177,184.11727587927,198.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|EntrezGene=64209
|HGNC=
|MCL_coexpression_id=693
|UniProt=Q8C4N0,Q3TMN9,Q9JJK5
|association_with_transcript=0bp_to_ENSMUST00000034220,NM_022331,uc009mwg.1,uc009mwh.1_5end
|description=CAGE_peak_1_at_Herpud1_5end
|id=chr8:96910386..96910409,+
|ontology_enrichment_celltype=CL:0000063!1.42e-08!66
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.23e-13!130;UBERON:0000925!2.23e-13!130;UBERON:0006595!2.23e-13!130;UBERON:0001007!5.16e-13!128;UBERON:0001555!5.16e-13!128;UBERON:0007026!5.16e-13!128;UBERON:0004921!2.21e-12!126;UBERON:0004185!2.21e-12!126;UBERON:0000160!1.56e-10!43;UBERON:0005409!1.18e-09!59;UBERON:0002107!7.82e-09!22;UBERON:0007499!7.82e-09!22;UBERON:0006925!7.82e-09!22;UBERON:0009497!7.82e-09!22;UBERON:0000015!7.82e-09!22;UBERON:0002423!7.82e-09!22;UBERON:0006235!7.82e-09!22;UBERON:0008835!7.82e-09!22;UBERON:0003894!7.82e-09!22;UBERON:0004161!7.82e-09!22;UBERON:0008836!7.82e-09!22;UBERON:0009854!1.73e-08!23;UBERON:0009856!1.73e-08!23;UBERON:0002365!6.72e-08!25;UBERON:0002330!6.72e-08!25;UBERON:0002108!1.77e-07!16;UBERON:0000077!5.32e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.77e-09,118;UBERON:0000925,4.77e-09,118;UBERON:0006595,4.77e-09,118;UBERON:0002107,7.82e-09,22;UBERON:0007499,7.82e-09,22;UBERON:0006925,7.82e-09,22;UBERON:0009497,7.82e-09,22;UBERON:0000015,7.82e-09,22;UBERON:0002423,7.82e-09,22;UBERON:0006235,7.82e-09,22;UBERON:0008835,7.82e-09,22;UBERON:0003894,7.82e-09,22;UBERON:0004161,7.82e-09,22;UBERON:0008836,7.82e-09,22;UBERON:0001007,9.55e-09,116;UBERON:0001555,9.55e-09,116;UBERON:0007026,9.55e-09,116;UBERON:0009854,1.73e-08,23;UBERON:0009856,1.73e-08,23;UBERON:0004921,3.16e-08,114;UBERON:0002365,6.72e-08,25;UBERON:0002330,6.72e-08,25;UBERON:0002100,2.04e-07,90;UBERON:0005256,4.59e-07,45
|phase1_expression=46.1228679661807,447.386472593661,514.604139749565,737.710211377358,1034.34968233921,287.073554969332,267.720086122472,106.655865162742,505.431512524484,434.657825379942,174.128673685339,116.228035656205,77.382729928905,96.5121242705731,95.2693918792795,142.542588242437,132.21719496622,185.176291065286,172.352843042414,206.677760425641,153.928355173436,176.14214743037,158.809471796473,165.112180322796,183.98624341587,353.726889894852,486.330293663595,260.289249084554,149.548431112166,174.404849793872,397.341075094306,113.670490549274,98.4103660135312,47.5445043046316,97.6318474759308,92.0939935286048,110.251452381679,103.795844422753,96.8855827209512,68.0580867165938,151.175492423971,152.319143145733,92.2469670759192,96.3110657513166,85.9676376741483,38.7283647061148,49.2906546939265,35.1020501772519,51.6262529426009,58.1345398232107,27.4373386385711,33.0630898039435,113.924389513203,94.2970784614748,72.9323544139147,128.886977454009,96.8483026992998,93.8523207944945,28.3243045203437,39.6743234454025,28.5224131577781,34.9009868031206,36.4610866405567,87.7402224349364,107.7864335198,88.0995342533164,43.7416161356871,53.0221261343745,15.9682002955056,21.8709620097339,20.6118462124354,35.9920240348793,45.4989194360324,23.2732518508413,20.5109307979026,26.6573448116906,110.115880999389,68.8234752279162,90.4742480879274,34.1585485221202,31.7462123300361,40.1103295328705,87.942644685435,73.7219019141501,90.914957427202,34.4715445004191,32.7454865837937,33.5519002485541,26.731346246614,26.7523322778021,292.183404611291,1225.24360082149,1981.43646642439,1197.06167905268,1226.7778761412,1507.16244819544,296.61861531826,63.9113709667717,76.8966573624492,75.6146689452128,49.1543535020615,68.0130330295885,147.787039029854,71.1066703153331,36.5869859308952,34.2035818391383,42.4640533812418,678.023877771778,178.667139716548,88.1746306045059,37.1258599279531,41.1028395721391,51.8884868826132,49.2863034607076,58.7943535678524,54.2879674544198,276.116778959296,124.355446951124,137.99924610418,69.2362117774911,107.108136453291,93.5809238550979,68.9649516507052,46.8449275218475,44.193255137639,245.238773000248,414.440515665978,280.754478104915,300.775227481944,86.2794082971779,49.4100651044117,31.4135880282161,50.930525816337,38.1016031422192,75.2192721305608,58.5690959674605,42.4670147255819,124.531377580703,189.036623308389,102.274741960826,26.0240885925407,28.0480567408837,35.8323638312645,50.3354091571288,42.7949579661852,35.3593867986185,36.9184794765332,84.0785954901801,17.8921434134259,25.5293208226556,22.5217438929855,33.3177513289914,37.2583313962301,45.969285980926,62.1462051951989,26.4715574868596,233.836991375307,260.436082000092,241.823137985649,39.7681483268164,38.931325956862,42.8547706277215,44.7447550256047,45.8460659971451,62.4781807193882,72.0855228726264,64.9221631387078,93.8793352632043,72.0772142621044,86.6804210337623,136.600944084767,137.135588204962,105.164505224413,230.566627430319,35.5390013073375,29.8423375899925,239.884036446237,222.667377130704,21.3288250535234,27.1716906076713,38.5313709353059,71.5976512412866,105.184814738624,97.2052949435177,184.11727587927,198.132842532985,137.480359213747,135.688313932065,142.323783596958,158.192215923143,98.1266746431112,162.100996429055,23.7084876191352,18.8510045806053,25.9227792048085,32.5842124552503,42.8634996640453,75.1855989224215,72.1528888587776,224.810255372934,133.291919937327,261.972179005983,763.365514749408,58.3957870006329,57.3952265730553,68.3580821649955,104.472962515079,164.965177270653,224.580001271212,242.240147733583,534.235572223742,237.770183820879,205.588535334117,307.388422774184,259.927381704429,427.61604036446,221.555805699562,440.953378526118,217.63925801626,39.6037050600313,37.1560146287819,43.6244870442234,46.4686691611234,63.4848715704482,109.26203116668,152.594512624799,77.0835854679274,78.1770354460176,83.3948440078658,198.930064064906,102.402194246476,163.453436197108,51.2690365393526,60.3735309038768,27.538799289066,57.1189064850796,74.3349231643477,80.0555819424748,51.9673776844061,103.513080153793,40.0695438658646,35.1394869866975,41.3612923646974,27.720380562496,29.1866263047936,35.3845663486041,39.6714487641396,44.4228904025194,43.0863677961711,39.2012006034605,69.5506417520516,47.0093193681554,33.7176005861903,119.438369032116,1916.83979762906,44.9144176886716,103.394656481945,386.074598260323,501.717916004433,460.230416472059,457.159650614583,250.838273339479,272.363997085927,736.997719506323,1278.72772201474,1355.20103828118,134.473644272746,27.0091641046965,34.1506925186472,50.3692032324242,45.5764400460643,52.0836947398046,77.1734906623947,128.179743577246,78.3803504932793,176.032450887835,1344.12058614499,103.713453100191,73.466314146637,44.8125032216198,48.7039163532797,55.1513423143406,195.58364137863,61.1903496634682,155.492501526046,45.6114978198722,45.0022701508399,68.3777498927028,65.7499235338131,79.8435824490764,424.096182834669,366.392902183337,370.928729691073,299.766574056746,21.9853515538889,52.456422518727,59.7269534744561,81.3353471496283,125.776836717798,164.399638243096,187.375384129337,135.851333889711,106.673123019146,505.770200852757,36.6400410144724,20.932316446157,21.8405207403369,33.4456043951762,30.0942388703113,34.9739179765911,41.4271052419512,29.9470085141085,26.3196954508534,35.0296975197709,44.6446509699691,54.6699238686748,32.4360344464263,33.0729282070744,30.9211558687152,27.9281645241271,34.9679184415026,30.890230526632,32.7870750327561,29.6841362847554,34.9789242546449,33.0709887248837,46.8772406358209,37.5226182397285,45.3482380464487,130.596700962362,4.21773311410723,7.26682238536753,13.2628846927622,136.778232574791,82.3926067230689,57.326458395654,112.54339901651,400.25453902022,49.6981621503019,55.2390283808612,50.4148051826669,63.7575306495081,33.5690434687615,39.2804826642644,47.2515750162264,41.4295506966283,43.9548136714678,47.6339486811674,22.1067050354296,26.7346665178691,28.6832457666945,53.726584472093,36.4726902972689,70.0443767194554,68.0074987072943,70.6700246329407,53.5935080018332,70.5025220820995,60.5815526737673,67.3396038748292,71.8230362293998,67.610560939542,61.8580000651955,66.2048230883472,74.1659686047075,62.8884058711678,74.5875480453985,58.8795680537589,72.3454122533226,72.2326531068504,70.1002398445124,78.9231042313544,69.9232696485906,75.8993032788338,72.8053332033635,78.657843719915,71.704572110615,82.4879139336875,62.4020195333156,72.9918214402925,73.6615877705441,72.5104416750321,71.5683526740034,51.2111684772789,73.2205934434128,82.7253558085948,108.269195950965,81.3982336551012,71.6471612067102
|short_description=p1@Herpud1
}}

Revision as of 16:31, 14 September 2013

Short description:p1@Herpud1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Herpud1_5end
Coexpression cluster:MCL_coexpression_mm9:693
Association with transcript: 0bp_to_ENSMUST00000034220, NM_022331, uc009mwg.1, uc009mwh.1_5end
EntrezGene:Herpud1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Herpud1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G746.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5447.39
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6514.60
CD326+ enterocyte, pool1.CNhs13542.11848-124I3737.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I41034.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7287.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8267.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9106.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7505.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2434.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6174.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1116.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E477.38
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E896.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A195.27
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3142.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5132.22
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2185.18
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4172.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6206.68
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3153.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2176.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9158.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1165.11
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2183.99
GP2+ M cell, pool1.CNhs13228.11845-124H9353.73
GP2+ M cell, pool2.CNhs13231.11846-124I1486.33
GP2+ M cell, pool3.CNhs13240.11847-124I2260.29
Ileum epithelium, pool1.CNhs13199.10252-104B9149.55
Ileum epithelium, pool2.CNhs13232.10253-104C1174.40
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8397.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3113.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G698.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F597.63
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F692.09
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7110.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8103.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H196.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H368.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9151.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2152.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H492.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D896.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D985.97
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B338.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B749.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C235.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B851.63
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C358.13
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2113.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I994.30
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A172.93
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1128.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E196.85
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C593.85
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E339.67
Mouse Granule cells, donor3.CNhs12108.11636-122C728.52
Mouse Meningeal cells, donor1.CNhs12132.11716-123C634.90
Mouse Meningeal cells, donor3.CNhs12109.11639-122D136.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C787.74
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7107.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D288.10
Mouse Microglia, donor1.CNhs12629.11718-123C843.74
Mouse Microglia, donor2.CNhs12634.11736-123E853.02
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D545.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3110.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F368.82
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D790.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E487.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E573.72
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I690.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.55
Mouse Schwann, donor1.CNhs12507.11728-123D926.73
Mouse Schwann, donor2.CNhs12573.11746-123F926.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3292.18
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71225.24
Mouse hepatocyte, donor1.CNhs13078.11714-123C41981.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81197.06
Mouse hepatocyte, donor6.CNhs13090.11822-124F41226.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F61507.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7296.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I763.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E376.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I875.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G649.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H168.01
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8147.79
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G136.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G342.46
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6678.02
accessory axillary lymph node, adult.CNhs10475.1063-29H9178.67
adrenal gland, adult.CNhs10508.49-24D788.17
adrenal gland, embryo E14.CNhs11038.406-44C537.13
adrenal gland, embryo E16.CNhs11004.1254-43D641.10
adrenal gland, embryo E17.CNhs11043.1263-45I151.89
adrenal gland, embryo E18.CNhs11026.1262-18F549.29
adrenal gland, neonate N00.CNhs11191.1311-23C158.79
adrenal gland, neonate N25.CNhs11223.1377-27I354.29
amnion, adult pregnant day17.5.CNhs10488.583-22A8276.12
aorta, adult.CNhs10498.46-23H1124.36
bone (os femoris), adult.CNhs10483.56-12G2138.00
bone (os femoris), neonate N02.CNhs11227.1985-43F569.24
bone (os femoris), neonate N16.CNhs11225.1525-43A6107.11
bone (os femoris), neonate N20.CNhs11195.1350-25C393.58
cecum, adult.CNhs10467.37-13H468.96
cerebellum, adult.CNhs10494.15-8B246.84
cerebellum, neonate N30.CNhs11135.1395-42I244.19
colon, adult.CNhs10468.36-18H7245.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7414.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1280.75
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4300.78
corpora quadrigemina, adult.CNhs10501.16-22A486.28
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F131.41
cortex, adult.CNhs10473.12-14D550.93
cortex, neonate N30.CNhs11107.1392-42F238.10
diencephalon, adult.CNhs10482.20-12F275.22
diencephalon, neonate N30.CNhs11201.1388-42B258.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B142.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2124.53
epididymis, adult.CNhs10490.58-23B2189.04
eyeball, adult.CNhs10484.31-12G4102.27
eyeball, embryo E12.CNhs11016.345-16C626.02
eyeball, embryo E14.CNhs10521.399-16E228.05
eyeball, embryo E15.CNhs10593.426-16C935.83
eyeball, embryo E17.CNhs11023.1261-18D450.34
eyeball, neonate N00.CNhs11207.633-15C642.79
eyeball, neonate N01.CNhs11140.1532-43E735.36
eyeball, neonate N02.CNhs11205.1551-44G836.92
eyeball, neonate N16.CNhs11188.777-19A284.08
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H225.53
forelimb, embryo E13.CNhs10589.384-1E222.52
forelimb, embryo E14.CNhs10577.413-26A833.32
forelimb, embryo E15.CNhs11007.437-20E737.26
forelimb, embryo E17.CNhs10598.1517-43C445.97
forelimb, embryo E18.CNhs11008.1520-43B562.15
gonad, embryo E13.CNhs11044.1564-45I626.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8233.84
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2260.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5241.82
heart, embryo E11.CNhs10586.331-24E939.77
heart, embryo E12.CNhs11015.353-12F538.93
heart, embryo E13.CNhs11013.376-3I942.85
heart, embryo E14.CNhs10597.403-26D444.74
heart, embryo E15.CNhs11017.431-16C845.85
heart, embryo E16.CNhs11021.457-17C662.48
heart, embryo E17.CNhs11025.479-18E572.09
heart, embryo E18.CNhs11030.1283-20G364.92
heart, neonate N00.CNhs11213.639-21E393.88
heart, neonate N03.CNhs11221.1349-25I272.08
heart, neonate N10.CNhs11118.749-24G186.68
heart, neonate N16.CNhs11209.782-15G1136.60
heart, neonate N20.CNhs11127.821-26I6137.14
heart, neonate N25.CNhs11196.1351-25D3105.16
heart, neonate N30.CNhs11202.1390-42D2230.57
hippocampus, adult.CNhs10478.13-16E835.54
hippocampus, neonate N00.CNhs11228.627-43G129.84
intestinal mucosa, adult.CNhs10506.860-29I3239.88
intestine, adult.CNhs10496.178-9A3222.67
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D527.17
intestine, embryo E15.CNhs10602.976-16D838.53
intestine, embryo E16.CNhs10585.463-22H471.60
intestine, embryo E17.CNhs10582.482-18D3105.18
intestine, embryo E18.CNhs10526.1289-20F797.21
intestine, neonate N00.CNhs11126.644-26D1184.12
intestine, neonate N01.CNhs11192.1322-23E9198.13
intestine, neonate N06.CNhs11102.688-20B8137.48
intestine, neonate N07.CNhs11095.720-20F2135.69
intestine, neonate N10.CNhs11098.755-23A5142.32
intestine, neonate N20.CNhs11187.827-18D1158.19
intestine, neonate N25.CNhs11121.1352-25E398.13
intestine, neonate N30.CNhs11131.1384-42G1162.10
kidney, embryo E14.CNhs10606.411-4I923.71
kidney, embryo E15.CNhs10997.434-16F818.85
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I232.58
kidney, embryo E18.CNhs11001.1288-20C742.86
kidney, neonate N00.CNhs11214.646-21G775.19
kidney, neonate N10.CNhs11206.758-6D572.15
kidney, neonate N20.CNhs11113.832-19I1224.81
kidney, neonate N25.CNhs11122.1353-25F3133.29
kidney, neonate N30.CNhs11203.1385-42H1261.97
liver, adult pregnant day01.CNhs10466.508-5B2763.37
liver, embryo E12.CNhs10601.355-15F858.40
liver, embryo E13.CNhs10524.378-3H657.40
liver, embryo E14.CNhs10594.409-16E168.36
liver, embryo E15.CNhs10520.433-16D7104.47
liver, embryo E16.CNhs10523.462-17F5164.97
liver, embryo E17.CNhs10510.481-18A3224.58
liver, embryo E18.CNhs10579.499-43G4242.24
liver, neonate N00.CNhs11117.641-24F4534.24
liver, neonate N03.CNhs11123.1345-25G2237.77
liver, neonate N06.CNhs11101.684-20A8205.59
liver, neonate N07.CNhs11103.716-20H2307.39
liver, neonate N10.CNhs11115.751-24B9259.93
liver, neonate N20.CNhs11220.823-25A3427.62
liver, neonate N25.CNhs11198.1368-26H1221.56
liver, neonate N30.CNhs11106.1382-42D1440.95
lung, adult.CNhs10474.28-22B1217.64
lung, embryo E12.CNhs10522.354-16G239.60
lung, embryo E14.CNhs10604.404-26F837.16
lung, embryo E15.CNhs11020.432-17C543.62
lung, embryo E16.CNhs10998.458-17B646.47
lung, embryo E17.CNhs10605.480-44A663.48
lung, embryo E18.CNhs10583.1287-20I6109.26
lung, neonate N00.CNhs11224.640-42C6152.59
lung, neonate N06.CNhs11212.683-20E577.08
lung, neonate N07.CNhs11111.715-19A378.18
lung, neonate N10.CNhs11219.750-23E683.39
lung, neonate N20.CNhs11109.822-18A4198.93
lung, neonate N25.CNhs11119.1359-25C7102.40
lung, neonate N30.CNhs11133.1394-42H2163.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A151.27
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.37
mammary gland, adult lactating day02.CNhs10480.595-22B627.54
mammary gland, adult pregnant day19.CNhs10476.588-5H257.12
medulla oblongata, adult.CNhs10477.17-12C274.33
medulla oblongata, neonate N30.CNhs11200.1396-42A380.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C751.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2103.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E140.07
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.14
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E341.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D439.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D544.42
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.09
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I769.55
ovary, embryo E18.CNhs11040.505-44H747.01
ovary, neonate N00.CNhs11217.1299-22I433.72
oviduct, adult pregnant day01.CNhs10500.988-6G6119.44
pancreas, adult.CNhs10486.34-16E41916.84
pancreas, embryo E14.CNhs11012.405-44F444.91
pancreas, embryo E15.CNhs11042.1556-45F2103.39
pancreas, embryo E16.CNhs11003.460-26E5386.07
pancreas, embryo E17.CNhs10599.1558-45G3501.72
pancreas, embryo E18.CNhs10580.1535-43I7460.23
pancreas, neonate N00.CNhs11105.645-26G9457.16
pancreas, neonate N01.CNhs11138.1531-43D7250.84
pancreas, neonate N02.CNhs11139.1539-43D8272.36
pancreas, neonate N16.CNhs11136.787-43B6737.00
pancreas, neonate N25.CNhs11094.1555-45E21278.73
pancreas, neonate N30.CNhs11182.1548-44H51355.20
pituitary gland, adult.CNhs10493.21-1G8134.47
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C734.15
pituitary gland, embryo E14.CNhs11037.398-44A550.37
pituitary gland, embryo E15.CNhs10592.427-16B945.58
pituitary gland, embryo E16.CNhs11036.449-43F652.08
pituitary gland, embryo E17.CNhs11039.1265-44F577.17
pituitary gland, neonate N00.CNhs11190.1308-22E9128.18
placenta, adult pregnant day10.CNhs10472.539-13I778.38
placenta, adult pregnant day17.CNhs10464.577-18G3176.03
prostate, adult.CNhs10470.859-1F81344.12
skin, adult.CNhs10492.30-1C3103.71
skin, neonate N00.CNhs11124.650-25G473.47
skin, neonate N03.CNhs11215.662-22H344.81
skin, neonate N06.CNhs11097.693-20I548.70
skin, neonate N10.CNhs11108.762-6C455.15
small intestine, neonate N16.CNhs11114.790-21I1195.58
spinal cord, adult.CNhs10505.24-13C961.19
spleen, adult.CNhs10465.25-2G2155.49
spleen, embryo E16.CNhs11035.461-43C145.61
spleen, embryo E18.CNhs11011.1271-21F245.00
spleen, neonate N10.CNhs11116.752-24D168.38
spleen, neonate N20.CNhs11112.824-19H165.75
spleen, neonate N25.CNhs11099.1354-25G379.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6424.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9366.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3370.93
stomach, adult.CNhs10503.33-1H6299.77
stomach, embryo E12.CNhs10588.356-43E321.99
stomach, embryo E15.CNhs10603.1252-16G852.46
stomach, embryo E16.CNhs11022.459-17D459.73
stomach, embryo E17.CNhs11006.1035-18D581.34
stomach, embryo E18.CNhs10999.1286-20C6125.78
stomach, neonate N03.CNhs11193.1340-24B8164.40
stomach, neonate N07.CNhs11210.718-18A9187.38
stomach, neonate N25.CNhs11104.1355-25E4135.85
stomach, neonate N30.CNhs11134.1386-42I1106.67
submandibular gland, adult.CNhs10469.59-29C1505.77
testis, adult.CNhs10504.57-7G536.64
testis, embryo E13.CNhs11031.389-23F520.93
testis, embryo E15.CNhs11034.443-27C521.84
testis, embryo E16.CNhs11033.470-26G533.45
testis, embryo E17.CNhs11029.486-18I530.09
testis, embryo E18.CNhs11027.503-18G534.97
testis, neonate N00.CNhs11189.1300-22B741.43
testis, neonate N07.CNhs11222.726-26I429.95
testis, neonate N10.CNhs11204.763-44D926.32
testis, neonate N20.CNhs11110.839-18H335.03
testis, neonate N30.CNhs11130.1391-42E244.64
thymus, adult.CNhs10471.38-12B554.67
thymus, embryo E14.CNhs11041.402-44I432.44
thymus, embryo E15.CNhs11005.430-45I233.07
thymus, embryo E16.CNhs11002.456-26C530.92
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G434.97
thymus, neonate N02.CNhs11181.1541-43F830.89
thymus, neonate N03.CNhs11137.2104-43C732.79
thymus, neonate N06.CNhs11197.681-26C429.68
thymus, neonate N07.CNhs11211.713-19D334.98
thymus, neonate N10.CNhs11194.748-24E433.07
thymus, neonate N20.CNhs11186.820-7A246.88
thymus, neonate N25.CNhs11125.1362-25G737.52
thymus, neonate N30.CNhs11132.1393-42G245.35
tongue, adult.CNhs10499.32-1B4130.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.26
urinary bladder, adult.CNhs10481.879-12E4136.78
uterus, adult pregnant day19.CNhs10497.590-15F582.39
uterus, adult.CNhs10509.92-27E557.33
vagina, adult.CNhs10502.89-27D5112.54
vesicular gland, adult.CNhs10491.51-27F8400.25
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A255.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D763.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A539.28
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.43
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.63
whole body, embryo E11.CNhs11014.324-5I822.11
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H228.68
whole body, embryo E14.5.CNhs10578.420-27D253.73
whole body, embryo E14.CNhs10519.395-14B136.47
whole body, embryo E16.CNhs10514.453-14F270.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G568.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G570.67
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G553.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G570.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G560.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G567.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G571.82
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G567.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G561.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G566.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G562.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G574.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G558.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G572.35
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G572.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G570.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G578.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G569.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G575.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G572.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G578.66
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G571.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G582.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G562.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G572.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G573.66
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G572.51
whole body, embryo E17.5.CNhs10513.490-9F971.57
whole body, embryo E17.CNhs10517.475-3I551.21
whole body, embryo E18.CNhs10516.493-3B373.22
whole body, neonate N00.CNhs10525.657-19C282.73
whole body, neonate N01.CNhs10576.659-23C6108.27
whole body, neonate N06.CNhs10515.692-21D181.40
whole body, neonate N10.CNhs10518.761-6B471.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.77e-09118
endoderm4.77e-09118
presumptive endoderm4.77e-09118
liver7.82e-0922
epithelial sac7.82e-0922
digestive gland7.82e-0922
epithelium of foregut-midgut junction7.82e-0922
anatomical boundary7.82e-0922
hepatobiliary system7.82e-0922
foregut-midgut junction7.82e-0922
hepatic diverticulum7.82e-0922
liver primordium7.82e-0922
septum transversum7.82e-0922
liver bud7.82e-0922
digestive system9.55e-09116
digestive tract9.55e-09116
primitive gut9.55e-09116
digestive tract diverticulum1.73e-0823
sac1.73e-0823
subdivision of digestive tract3.16e-08114
exocrine gland6.72e-0825
exocrine system6.72e-0825
trunk2.04e-0790
trunk mesenchyme4.59e-0745







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