FFCP PHASE1:Mm9::chr9:32180020..32180031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56379|HGNC=|MCL_coexpression_id=11|UniProt=O88335|association_with_transcript=17bp_to_ENSMUST00000047334,NM_019659,uc009orx.2_5end|description=CAGE_peak_5_at_Kcnj1_5end|id=chr9:32180020..32180031,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!7.63e-18!14;UBERON:0003918!7.63e-18!14;UBERON:0005095!7.63e-18!14;UBERON:0007687!7.63e-18!14;UBERON:0006554!1.80e-15!16;UBERON:0001008!1.71e-14!17;UBERON:0000489!1.64e-11!21;UBERON:0003103!7.95e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.09e-38,14;UBERON:0003918,3.09e-38,14;UBERON:0011143,3.09e-38,14;UBERON:0005095,3.09e-38,14;UBERON:0007687,3.09e-38,14;UBERON:0006554,8.56e-30,18;UBERON:0001008,3.09e-28,19;UBERON:0000489,1.45e-25,21;UBERON:0003103,1.59e-12,43;UBERON:0005172,5.45e-11,49;UBERON:0005173,5.45e-11,49;UBERON:0002417,5.45e-11,49;UBERON:0000916,5.45e-11,49;UBERON:0003104,8.16e-09,61;UBERON:0009142,8.16e-09,61;UBERON:0009569,3.87e-08,66;UBERON:0005177,8.94e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,1.01825663922657,1.35766741017338,1.68325967736765,5.81776141543167,11.0707610984702,18.3688511574409,15.0544539984597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p5@Kcnj1}} | ||
|EntrezGene=56379 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=O88335 | |||
|association_with_transcript=17bp_to_ENSMUST00000047334,NM_019659,uc009orx.2_5end | |||
|description=CAGE_peak_5_at_Kcnj1_5end | |||
|id=chr9:32180020..32180031,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.63e-18!14;UBERON:0003918!7.63e-18!14;UBERON:0005095!7.63e-18!14;UBERON:0007687!7.63e-18!14;UBERON:0006554!1.80e-15!16;UBERON:0001008!1.71e-14!17;UBERON:0000489!1.64e-11!21;UBERON:0003103!7.95e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.09e-38,14;UBERON:0003918,3.09e-38,14;UBERON:0011143,3.09e-38,14;UBERON:0005095,3.09e-38,14;UBERON:0007687,3.09e-38,14;UBERON:0006554,8.56e-30,18;UBERON:0001008,3.09e-28,19;UBERON:0000489,1.45e-25,21;UBERON:0003103,1.59e-12,43;UBERON:0005172,5.45e-11,49;UBERON:0005173,5.45e-11,49;UBERON:0002417,5.45e-11,49;UBERON:0000916,5.45e-11,49;UBERON:0003104,8.16e-09,61;UBERON:0009142,8.16e-09,61;UBERON:0009569,3.87e-08,66;UBERON:0005177,8.94e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,1.01825663922657,1.35766741017338,1.68325967736765,5.81776141543167,11.0707610984702,18.3688511574409,15.0544539984597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Kcnj1 | |||
}} |
Revision as of 17:37, 14 September 2013
Short description: | p5@Kcnj1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kcnj1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 17bp_to_ENSMUST00000047334, NM_019659, uc009orx.2_5end |
EntrezGene: | Kcnj1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.09e-38 | 14 |
kidney mesenchyme | 3.09e-38 | 14 |
upper urinary tract | 3.09e-38 | 14 |
kidney rudiment | 3.09e-38 | 14 |
kidney field | 3.09e-38 | 14 |
urinary system structure | 8.56e-30 | 18 |
renal system | 3.09e-28 | 19 |
cavitated compound organ | 1.45e-25 | 21 |
compound organ | 1.59e-12 | 43 |
abdomen element | 5.45e-11 | 49 |
abdominal segment element | 5.45e-11 | 49 |
abdominal segment of trunk | 5.45e-11 | 49 |
abdomen | 5.45e-11 | 49 |
mesenchyme | 8.16e-09 | 61 |
entire embryonic mesenchyme | 8.16e-09 | 61 |
subdivision of trunk | 3.87e-08 | 66 |
trunk region element | 8.94e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.