FFCP PHASE1:Mm9::chr9:36283165..36283170,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=671003|HGNC=|MCL_coexpression_id=56|UniProt=B3GLJ6|association_with_transcript=-52bp_to_ENSMUST00000165591,NM_001128510,uc012gqv.1_5end|description=CAGE_peak_1_at_Gm9513_5end|id=chr9:36283165..36283170,+|ontology_enrichment_celltype=CL:0000349!1.69e-33!3;CL:0000351!1.69e-33!3|ontology_enrichment_celltype_v019_2=CL:0000349,2.99e-24,3;CL:0000351,2.99e-24,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.69e-33!3;UBERON:0000307!1.69e-33!3;UBERON:0005795!1.99e-25!4;UBERON:0000995!1.99e-25!4;UBERON:0001987!5.10e-23!2;UBERON:0003124!5.10e-23!2;UBERON:0004340!5.10e-23!2;UBERON:0003975!1.65e-20!5;UBERON:0003100!2.00e-16!11;UBERON:0005631!1.04e-15!3;UBERON:0000478!1.04e-15!3;UBERON:0000158!1.04e-15!3;UBERON:0003134!4.23e-13!8;UBERON:0006834!2.59e-12!1;UBERON:0004175!1.01e-11!9;UBERON:0000474!1.01e-11!9;UBERON:0001911!9.80e-07!2;UBERON:0000076!9.80e-07!2;UBERON:0005333!9.80e-07!2;UBERON:0008425!9.80e-07!2;UBERON:0005311!9.80e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.99e-24,3;UBERON:0000307,2.99e-24,3;UBERON:0007010,2.99e-24,3;UBERON:0006834,1.74e-18,1;UBERON:0005795,1.74e-18,4;UBERON:0000995,1.74e-18,4;UBERON:0003975,5.16e-15,5;UBERON:0003100,5.33e-15,11;UBERON:0001987,3.37e-10,2;UBERON:0003124,3.37e-10,2;UBERON:0004340,3.37e-10,2;UBERON:0001911,7.56e-10,2;UBERON:0000076,7.56e-10,2;UBERON:0005333,7.56e-10,2;UBERON:0008425,7.56e-10,2;UBERON:0005311,7.56e-10,2;UBERON:0003134,8.88e-10,8;UBERON:0004175,8.40e-09,9;UBERON:0000474,8.40e-09,9;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,642.765808386503,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,2.06341870201794,6.37961542183498,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm9513}} | ||
|EntrezGene=671003 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=B3GLJ6 | |||
|association_with_transcript=-52bp_to_ENSMUST00000165591,NM_001128510,uc012gqv.1_5end | |||
|description=CAGE_peak_1_at_Gm9513_5end | |||
|id=chr9:36283165..36283170,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.69e-33!3;CL:0000351!1.69e-33!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.99e-24,3;CL:0000351,2.99e-24,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.69e-33!3;UBERON:0000307!1.69e-33!3;UBERON:0005795!1.99e-25!4;UBERON:0000995!1.99e-25!4;UBERON:0001987!5.10e-23!2;UBERON:0003124!5.10e-23!2;UBERON:0004340!5.10e-23!2;UBERON:0003975!1.65e-20!5;UBERON:0003100!2.00e-16!11;UBERON:0005631!1.04e-15!3;UBERON:0000478!1.04e-15!3;UBERON:0000158!1.04e-15!3;UBERON:0003134!4.23e-13!8;UBERON:0006834!2.59e-12!1;UBERON:0004175!1.01e-11!9;UBERON:0000474!1.01e-11!9;UBERON:0001911!9.80e-07!2;UBERON:0000076!9.80e-07!2;UBERON:0005333!9.80e-07!2;UBERON:0008425!9.80e-07!2;UBERON:0005311!9.80e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,2.99e-24,3;UBERON:0000307,2.99e-24,3;UBERON:0007010,2.99e-24,3;UBERON:0006834,1.74e-18,1;UBERON:0005795,1.74e-18,4;UBERON:0000995,1.74e-18,4;UBERON:0003975,5.16e-15,5;UBERON:0003100,5.33e-15,11;UBERON:0001987,3.37e-10,2;UBERON:0003124,3.37e-10,2;UBERON:0004340,3.37e-10,2;UBERON:0001911,7.56e-10,2;UBERON:0000076,7.56e-10,2;UBERON:0005333,7.56e-10,2;UBERON:0008425,7.56e-10,2;UBERON:0005311,7.56e-10,2;UBERON:0003134,8.88e-10,8;UBERON:0004175,8.40e-09,9;UBERON:0000474,8.40e-09,9;UBERON:0005631,3.18e-07,3;UBERON:0000478,3.18e-07,3;UBERON:0000158,3.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,642.765808386503,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,2.06341870201794,6.37961542183498,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm9513 | |||
}} |
Revision as of 17:42, 14 September 2013
Short description: | p1@Gm9513 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm9513_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | -52bp_to_ENSMUST00000165591, NM_001128510, uc012gqv.1_5end |
EntrezGene: | Gm9513 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.99e-24 | 3 |
trophoblast cell | 2.99e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 2.99e-24 | 3 |
blastula | 2.99e-24 | 3 |
cleaving embryo | 2.99e-24 | 3 |
uterus or analog | 1.74e-18 | 1 |
embryonic uterus | 1.74e-18 | 4 |
uterus | 1.74e-18 | 4 |
internal female genitalia | 5.16e-15 | 5 |
female organism | 5.33e-15 | 11 |
placenta | 3.37e-10 | 2 |
chorion | 3.37e-10 | 2 |
allantois | 3.37e-10 | 2 |
mammary gland | 7.56e-10 | 2 |
external ectoderm | 7.56e-10 | 2 |
mammary bud | 7.56e-10 | 2 |
mammary ridge | 7.56e-10 | 2 |
mammary placode | 7.56e-10 | 2 |
female reproductive organ | 8.88e-10 | 8 |
internal genitalia | 8.40e-09 | 9 |
female reproductive system | 8.40e-09 | 9 |
extraembryonic membrane | 3.18e-07 | 3 |
extraembryonic structure | 3.18e-07 | 3 |
membranous layer | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.