FFCP PHASE1:Mm9::chr9:98197273..98197293,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74080|HGNC=|MCL_coexpression_id=15|UniProt=Q3V3C7|association_with_transcript=192bp_to_ENSMUST00000112937_5end|description=CAGE_peak_2_at_Nmnat3_5end|id=chr9:98197273..98197293,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.10e-13!70;UBERON:0004921!1.48e-11!126;UBERON:0004185!1.48e-11!126;UBERON:0005057!3.00e-11!51;UBERON:0001007!3.46e-11!128;UBERON:0001555!3.46e-11!128;UBERON:0007026!3.46e-11!128;UBERON:0004119!4.54e-11!130;UBERON:0000925!4.54e-11!130;UBERON:0006595!4.54e-11!130;UBERON:0000926!2.39e-10!193;UBERON:0004120!2.39e-10!193;UBERON:0006603!2.39e-10!193;UBERON:0000077!1.22e-09!97;UBERON:0005172!1.23e-09!49;UBERON:0005173!1.23e-09!49;UBERON:0002417!1.23e-09!49;UBERON:0000916!1.23e-09!49;UBERON:0003104!1.54e-09!131;UBERON:0009142!1.54e-09!131;UBERON:0001041!6.63e-09!92;UBERON:0000949!2.10e-08!72;UBERON:0002390!8.22e-08!45;UBERON:0003061!8.22e-08!45;UBERON:0003929!8.83e-08!55;UBERON:0002193!1.43e-07!48;UBERON:0002530!2.92e-07!65;UBERON:0002368!6.66e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.05e-09,114;UBERON:0005172,1.82e-09,49;UBERON:0005173,1.82e-09,49;UBERON:0002417,1.82e-09,49;UBERON:0000916,1.82e-09,49;UBERON:0001007,2.36e-09,116;UBERON:0001555,2.36e-09,116;UBERON:0007026,2.36e-09,116;UBERON:0004119,3.08e-09,118;UBERON:0000925,3.08e-09,118;UBERON:0006595,3.08e-09,118;UBERON:0000949,2.94e-08,72;UBERON:0002390,3.28e-08,45;UBERON:0003061,3.28e-08,45;UBERON:0003929,4.53e-08,55;UBERON:0002193,5.93e-08,48;UBERON:0002405,5.93e-08,48;UBERON:0001041,2.82e-07,80;UBERON:0005177,3.05e-07,79;UBERON:0002530,3.48e-07,65;UBERON:0002368,8.05e-07,60|phase1_expression=1.44133962394315,0.348975407639361,1.81999695755814,2.11724947914781,0,3.3575854382378,1.63528848416868,3.22808308603941,7.03943610758334,3.27690336850791,13.3550015215894,6.62108919661292,6.67682846731702,2.53519167015092,14.6568295198892,30.3712901084739,38.4759032970481,3.78554598429885,6.30726394586398,2.12194825899015,1.53077922271926,2.58156473122302,2.87319768052829,1.75991665072747,1.37645568640302,0,1.7230479846363,1.29282739611533,0.760093677825496,0,1.55211357458713,9.52546010189447,10.4561013889377,0,9.82095507154334,7.48055904113216,5.3084032628216,0.837063261473815,0,1.57057123192139,2.94115744015507,0,0.971020706062307,0.377690453926732,0.709638518536602,0.734187008646726,3.12956537739216,1.09012578190223,0.439372365468944,0.58328969722285,0.419959264876088,0,1.51004345451963,1.45072428402269,4.7053131879945,0.771778308107841,1.71920063963254,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0.889294796111139,2.6996991518442,5.93319817540185,4.2628806896766,0.599200221036809,1.15265491596466,0.207379224616955,0,0.210324961351382,0.571301968807607,0,0,0.287536413054709,0,0,0.383062014255563,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.186399445825301,0.151452386666368,0.377857800533928,1.44932244350839,0.860423876981386,3.39985666853875,3.2382191498269,2.59910566979068,0.896053774194671,5.05599912474307,0,0,0,0.704217098883403,0,0,0,1.08245520505607,1.26679932737549,2.52762222507392,3.19714863213368,5.69663344023778,8.16431764856536,2.77576522825817,3.65358573974569,4.84292544237723,4.82312449768392,3.41007250693544,3.76999773989026,2.47194967734374,6.50697106139602,20.3460426948471,4.52947179852746,13.0296495891632,10.6672555689749,3.72783522436244,1.17112318804619,0.209446706813455,4.59822699375465,4.43315960671905,6.59893004092748,5.71816021828791,0.149790639404823,4.57500602818627,0.628271760564322,1.21677024134594,0.767146371990992,1.45451631191692,1.46017136760982,1.52759045775474,13.31154585528,10.108910337347,2.94618598241064,1.04096354370163,0,0.720248519221397,2.86339153887859,1.15662048557257,0.896796041993948,0.562210347358373,4.39795730256327,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,1.11218899690239,1.0447564995665,1.85203922767149,2.18937693500343,2.80885274925294,7.72043721344146,3.9782889915383,1.86413195281952,2.81431271977315,1.08037236876609,2.3674473558521,2.16440654922144,1.69693824176116,3.48800917125612,2.95100741539581,1.98501082024188,1.6455984991348,2.95501435342371,3.32382119138008,4.5321996101853,5.04965265169416,4.96563749413376,0.841159794256509,0.720332286654991,7.93005079161115,1.32225283331772,0.853153002140936,1.39342003116263,2.57734922644187,5.84882221407693,5.11469500843202,5.1360919050391,4.74529061544512,6.0938613247884,8.29406189040889,5.57078121715222,8.57841983324129,1.79763881730844,3.02593269824572,5.77509692437665,1.13800740571849,1.5994791765362,1.1270773567308,1.4255592949172,1.74557238450863,2.10407459670956,6.13394410105296,5.01874503130647,5.80895293013087,5.55287237648102,4.15033677922008,20.8556382145118,20.4421354917731,27.658039823337,31.0375985724409,32.0765622470714,24.6987076227977,16.9740721095978,12.3222772349027,6.31491250332587,10.0637744569148,7.0706780057015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| ||
|EntrezGene=74080 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=Q3V3C7 | |||
|association_with_transcript=192bp_to_ENSMUST00000112937_5end | |||
|description=CAGE_peak_2_at_Nmnat3_5end | |||
|id=chr9:98197273..98197293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.10e-13!70;UBERON:0004921!1.48e-11!126;UBERON:0004185!1.48e-11!126;UBERON:0005057!3.00e-11!51;UBERON:0001007!3.46e-11!128;UBERON:0001555!3.46e-11!128;UBERON:0007026!3.46e-11!128;UBERON:0004119!4.54e-11!130;UBERON:0000925!4.54e-11!130;UBERON:0006595!4.54e-11!130;UBERON:0000926!2.39e-10!193;UBERON:0004120!2.39e-10!193;UBERON:0006603!2.39e-10!193;UBERON:0000077!1.22e-09!97;UBERON:0005172!1.23e-09!49;UBERON:0005173!1.23e-09!49;UBERON:0002417!1.23e-09!49;UBERON:0000916!1.23e-09!49;UBERON:0003104!1.54e-09!131;UBERON:0009142!1.54e-09!131;UBERON:0001041!6.63e-09!92;UBERON:0000949!2.10e-08!72;UBERON:0002390!8.22e-08!45;UBERON:0003061!8.22e-08!45;UBERON:0003929!8.83e-08!55;UBERON:0002193!1.43e-07!48;UBERON:0002530!2.92e-07!65;UBERON:0002368!6.66e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.05e-09,114;UBERON:0005172,1.82e-09,49;UBERON:0005173,1.82e-09,49;UBERON:0002417,1.82e-09,49;UBERON:0000916,1.82e-09,49;UBERON:0001007,2.36e-09,116;UBERON:0001555,2.36e-09,116;UBERON:0007026,2.36e-09,116;UBERON:0004119,3.08e-09,118;UBERON:0000925,3.08e-09,118;UBERON:0006595,3.08e-09,118;UBERON:0000949,2.94e-08,72;UBERON:0002390,3.28e-08,45;UBERON:0003061,3.28e-08,45;UBERON:0003929,4.53e-08,55;UBERON:0002193,5.93e-08,48;UBERON:0002405,5.93e-08,48;UBERON:0001041,2.82e-07,80;UBERON:0005177,3.05e-07,79;UBERON:0002530,3.48e-07,65;UBERON:0002368,8.05e-07,60 | |||
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| |||
|short_description=p2@Nmnat3 | |||
}} |
Revision as of 19:04, 14 September 2013
Short description: | p2@Nmnat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nmnat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 192bp_to_ENSMUST00000112937_5end |
EntrezGene: | Nmnat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.05e-09 | 114 |
abdomen element | 1.82e-09 | 49 |
abdominal segment element | 1.82e-09 | 49 |
abdominal segment of trunk | 1.82e-09 | 49 |
abdomen | 1.82e-09 | 49 |
digestive system | 2.36e-09 | 116 |
digestive tract | 2.36e-09 | 116 |
primitive gut | 2.36e-09 | 116 |
endoderm-derived structure | 3.08e-09 | 118 |
endoderm | 3.08e-09 | 118 |
presumptive endoderm | 3.08e-09 | 118 |
endocrine system | 2.94e-08 | 72 |
hematopoietic system | 3.28e-08 | 45 |
blood island | 3.28e-08 | 45 |
gut epithelium | 4.53e-08 | 55 |
hemolymphoid system | 5.93e-08 | 48 |
immune system | 5.93e-08 | 48 |
foregut | 2.82e-07 | 80 |
trunk region element | 3.05e-07 | 79 |
gland | 3.48e-07 | 65 |
endocrine gland | 8.05e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.