FFCP PHASE1:Mm9::chrX:20002869..20002888,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=382207|HGNC=|MCL_coexpression_id=1697|UniProt=|association_with_transcript=-25bp_to_ENSMUST00000136093_5end|description=CAGE_peak_4_at_Phf16_5end|id=chrX:20002869..20002888,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!2.26e-11!79;UBERON:0003133!2.95e-09!24;UBERON:0005156!5.48e-09!26;UBERON:0000990!5.48e-09!26;UBERON:0003886!2.15e-08!38;UBERON:0002553!2.57e-08!39;UBERON:0002323!3.45e-08!37;UBERON:0004458!3.45e-08!37;UBERON:0000464!4.44e-08!57;UBERON:0004119!2.84e-07!130;UBERON:0000925!2.84e-07!130;UBERON:0006595!2.84e-07!130;UBERON:0000991!4.95e-07!18;UBERON:0005564!4.95e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003133,9.97e-12,24;UBERON:0003886,2.21e-10,38;UBERON:0005156,2.37e-10,26;UBERON:0000990,2.37e-10,26;UBERON:0002323,4.72e-10,37;UBERON:0004458,4.72e-10,37;UBERON:0002553,6.40e-10,39;UBERON:0003135,3.33e-09,15;UBERON:0000991,5.01e-09,18;UBERON:0005564,5.01e-09,18;UBERON:0000473,6.44e-09,14;UBERON:0003101,2.18e-08,16;UBERON:0000079,2.18e-08,16;UBERON:0004176,3.94e-08,17;UBERON:0009196,3.94e-08,17;UBERON:0009117,3.94e-08,17|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,1.51232105653415,1.00179145989269,1.6787927191189,3.03696432774183,0.129123323441576,0.703943610758334,1.17032263160997,1.02730780935303,0.558405112967355,0,0.0874204024189974,1.33243904726265,0.404950534779652,1.39912375625629,0.473193248037357,0.685572168028694,0.84877930359606,1.87095238332354,1.09220046320974,0.261199789138935,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0,0.443461021310609,0.635030673459631,0,0,1.73310971850765,1.82858109894342,1.63335485009895,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0.251793635951155,0.506884656097573,1.65192076945513,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,0,1.45072428402269,0.336093799142464,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.284743361598206,0.186399445825301,1.06016670666458,1.058001841495,1.73918693221007,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,1.02258193546835,0,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.5709193985953,0,0.29688427812965,0.693941307064543,0,0.691846491768175,0.452167921657868,0.940709657085638,0.628332956648377,21.0115722574218,0.86759614151947,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,1.07833612055328,0,0.254140454146129,0,0.457500602818626,0.376963056338593,0.347648640384553,0,0.20778804455956,0.162241263067758,0.407357455401265,0.497627882440372,1.0108910337347,0.420883711772948,0.780722657776222,0.919608417733892,0.900310649026746,0.452114453507145,1.08858398642125,1.15302348256365,0.843315521037559,0.517406741478031,1.07783996466421,0.945530400839096,0.527853372491847,0,0.556094498451196,0,0,2.58744546864041,0.702213187313235,0.51469581422943,0.568326998791185,1.03562886267751,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,1.16266972375204,0.268273401399619,0.583826711835847,0.822799249567402,0.164167464079095,0.324275238183423,0.438599962275997,1.3173006917463,0.536825675041487,0.210289948564127,0.411618449517138,0.660837565967596,1.58670339998127,1.06644125267617,1.62565670302307,1.41754207454303,0.605050573870028,0.667134131534611,0.380451252225118,0.949058123089023,0.823494773620054,1.50801125280162,0.596869416123452,1.16978452271472,0,0.216138049874694,0.796565093017469,0.569003702859245,0.913988100877831,0,1.22190796707189,1.55161989734101,0.841629838683823,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,1.48226313543574,1.33476084572875,1.96558995113203,1.57403478669398,1.21716072833102,0.482354319504834,1.52775511068852,0.575392274901621,1.45921704097532,0.823684239564244,0,1.11642284300551,0.624075346229121,1.51547326768267,1.61457672169721,1.92977408545347,0.739012760666419,0.37898282354097,1.30371981153621,1.18821560042632,1.17345124144251,1.84256883185997,0.714130922658041,2.14647012643579,0.315270288212382,0.221464689648775,0.637819074629948,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0.983609672260053,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.70328102249922,0.534196811001766,0.977321756121456,0.659880491890142,0,1.21390318077491,2.11626489875326,0.565815239267694,0.590603785761546,1.53717573971964,1.55056975900933,1.09060118843252,1.42598951353889,1.896220547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| ||
|EntrezGene=382207 | |||
|HGNC= | |||
|MCL_coexpression_id=1697 | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENSMUST00000136093_5end | |||
|description=CAGE_peak_4_at_Phf16_5end | |||
|id=chrX:20002869..20002888,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.26e-11!79;UBERON:0003133!2.95e-09!24;UBERON:0005156!5.48e-09!26;UBERON:0000990!5.48e-09!26;UBERON:0003886!2.15e-08!38;UBERON:0002553!2.57e-08!39;UBERON:0002323!3.45e-08!37;UBERON:0004458!3.45e-08!37;UBERON:0000464!4.44e-08!57;UBERON:0004119!2.84e-07!130;UBERON:0000925!2.84e-07!130;UBERON:0006595!2.84e-07!130;UBERON:0000991!4.95e-07!18;UBERON:0005564!4.95e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,9.97e-12,24;UBERON:0003886,2.21e-10,38;UBERON:0005156,2.37e-10,26;UBERON:0000990,2.37e-10,26;UBERON:0002323,4.72e-10,37;UBERON:0004458,4.72e-10,37;UBERON:0002553,6.40e-10,39;UBERON:0003135,3.33e-09,15;UBERON:0000991,5.01e-09,18;UBERON:0005564,5.01e-09,18;UBERON:0000473,6.44e-09,14;UBERON:0003101,2.18e-08,16;UBERON:0000079,2.18e-08,16;UBERON:0004176,3.94e-08,17;UBERON:0009196,3.94e-08,17;UBERON:0009117,3.94e-08,17 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,1.51232105653415,1.00179145989269,1.6787927191189,3.03696432774183,0.129123323441576,0.703943610758334,1.17032263160997,1.02730780935303,0.558405112967355,0,0.0874204024189974,1.33243904726265,0.404950534779652,1.39912375625629,0.473193248037357,0.685572168028694,0.84877930359606,1.87095238332354,1.09220046320974,0.261199789138935,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0,0.443461021310609,0.635030673459631,0,0,1.73310971850765,1.82858109894342,1.63335485009895,0.418531630736908,0.7813353445238,0,1.17646297606203,0,0,0.251793635951155,0.506884656097573,1.65192076945513,0.782391344348039,0,0,0.194429899074283,0.419959264876088,0,0,1.45072428402269,0.336093799142464,0.514518872071894,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.284743361598206,0.186399445825301,1.06016670666458,1.058001841495,1.73918693221007,0,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,0.140444420131752,1.02258193546835,0,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.5709193985953,0,0.29688427812965,0.693941307064543,0,0.691846491768175,0.452167921657868,0.940709657085638,0.628332956648377,21.0115722574218,0.86759614151947,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,1.07833612055328,0,0.254140454146129,0,0.457500602818626,0.376963056338593,0.347648640384553,0,0.20778804455956,0.162241263067758,0.407357455401265,0.497627882440372,1.0108910337347,0.420883711772948,0.780722657776222,0.919608417733892,0.900310649026746,0.452114453507145,1.08858398642125,1.15302348256365,0.843315521037559,0.517406741478031,1.07783996466421,0.945530400839096,0.527853372491847,0,0.556094498451196,0,0,2.58744546864041,0.702213187313235,0.51469581422943,0.568326998791185,1.03562886267751,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.462801338662135,1.16266972375204,0.268273401399619,0.583826711835847,0.822799249567402,0.164167464079095,0.324275238183423,0.438599962275997,1.3173006917463,0.536825675041487,0.210289948564127,0.411618449517138,0.660837565967596,1.58670339998127,1.06644125267617,1.62565670302307,1.41754207454303,0.605050573870028,0.667134131534611,0.380451252225118,0.949058123089023,0.823494773620054,1.50801125280162,0.596869416123452,1.16978452271472,0,0.216138049874694,0.796565093017469,0.569003702859245,0.913988100877831,0,1.22190796707189,1.55161989734101,0.841629838683823,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,1.48226313543574,1.33476084572875,1.96558995113203,1.57403478669398,1.21716072833102,0.482354319504834,1.52775511068852,0.575392274901621,1.45921704097532,0.823684239564244,0,1.11642284300551,0.624075346229121,1.51547326768267,1.61457672169721,1.92977408545347,0.739012760666419,0.37898282354097,1.30371981153621,1.18821560042632,1.17345124144251,1.84256883185997,0.714130922658041,2.14647012643579,0.315270288212382,0.221464689648775,0.637819074629948,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0,0,0.983609672260053,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.70328102249922,0.534196811001766,0.977321756121456,0.659880491890142,0,1.21390318077491,2.11626489875326,0.565815239267694,0.590603785761546,1.53717573971964,1.55056975900933,1.09060118843252,1.42598951353889,1.8962205476149,0,3.09406629744561,0.680879211507576,0.720244376125241,0.517434735131018,0.857348140126369,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,18.0697215209057,20.3358788029267,0.661585194164886,0.32977250588296,0.484393280087717,0.72375509913787,0.477489376012546,1.14898629821543,0.582961673259701,0,0.854354403989263,0.412773735926445,1.11116716421827,0.565105371014073,1.23024804948923,0.457556346413045,0.339956859987711,0.279902904647316,0.276399947608848,0,0.790839983952838,1.62655573701479,0.540026704109006,0.418176592028937,0.655087691238533,0.539457385539283,1.32245529160537,1.30877970992015,0.777689839750757,0.621339313086926,3.38215763210514,3.13984746692355,2.48187735685646,1.94451188344048,2.32487682259916,1.18269287843545,2.34714477291508,6.77062801188541,15.6240423194309,8.93861247056222,5.18454011264158,0.632022241256357,0.608175645870493,0.718976700153791,0.51968329191118,0.358053391334963,0.596044064343795,0.721172697119813,0.147689527174577,0.605798699688886,0.914481679859998,0.302478555410522,0.584747284438515,0.577271049841977,0.116876902181569,0,14.4290869693142,7.53596395519596,15.6132693218593,0.965947970160952,1.31377732815827,1.2820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| |||
|short_description=p4@Phf16 | |||
}} |
Revision as of 19:42, 14 September 2013
Short description: | p4@Phf16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Phf16_5end |
Coexpression cluster: | MCL_coexpression_mm9:1697 |
Association with transcript: | -25bp_to_ENSMUST00000136093_5end |
EntrezGene: | Phf16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 9.97e-12 | 24 |
body cavity precursor | 2.21e-10 | 38 |
reproductive structure | 2.37e-10 | 26 |
reproductive system | 2.37e-10 | 26 |
body cavity | 4.72e-10 | 37 |
body cavity or lining | 4.72e-10 | 37 |
anatomical cavity | 6.40e-10 | 39 |
male reproductive organ | 3.33e-09 | 15 |
gonad | 5.01e-09 | 18 |
gonad primordium | 5.01e-09 | 18 |
testis | 6.44e-09 | 14 |
male organism | 2.18e-08 | 16 |
male reproductive system | 2.18e-08 | 16 |
external genitalia | 3.94e-08 | 17 |
indifferent external genitalia | 3.94e-08 | 17 |
indifferent gonad | 3.94e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.