FFCP PHASE1:Mm9::chrX:20134685..20134694,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=211|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:20134685..20134694,+|id=chrX:20134685..20134694,+|ontology_enrichment_celltype=CL:0000181!9.58e-11!5;CL:0000417!9.58e-11!5;CL:0000668!9.58e-11!5;CL:0000412!9.58e-11!5;CL:0000182!9.58e-11!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.12e-31,5;CL:0000057,5.74e-11,1;CL:0000632,5.74e-11,1;CL:0000223,3.08e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.66e-46!22;UBERON:0007499!1.66e-46!22;UBERON:0006925!1.66e-46!22;UBERON:0009497!1.66e-46!22;UBERON:0000015!1.66e-46!22;UBERON:0002423!1.66e-46!22;UBERON:0006235!1.66e-46!22;UBERON:0008835!1.66e-46!22;UBERON:0003894!1.66e-46!22;UBERON:0004161!1.66e-46!22;UBERON:0008836!1.66e-46!22;UBERON:0009854!2.63e-44!23;UBERON:0009856!2.63e-44!23;UBERON:0002365!1.96e-40!25;UBERON:0002330!1.96e-40!25;UBERON:0003914!1.45e-19!47;UBERON:0005256!1.45e-19!47;UBERON:0005172!1.35e-18!49;UBERON:0005173!1.35e-18!49;UBERON:0002417!1.35e-18!49;UBERON:0000916!1.35e-18!49;UBERON:0005057!1.05e-17!51;UBERON:0003929!4.09e-16!55;UBERON:0002368!2.00e-14!60;UBERON:0002530!5.37e-13!65;UBERON:0000490!9.76e-13!66;UBERON:0009569!9.76e-13!66;UBERON:0005911!5.29e-12!69;UBERON:0002405!8.99e-12!70;UBERON:0000949!2.49e-11!72;UBERON:0000466!5.81e-10!79;UBERON:0001041!5.31e-09!92;UBERON:0005177!5.71e-09!85;UBERON:0000077!2.57e-08!97;UBERON:0002100!3.05e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.11e-28,22;UBERON:0007499,5.11e-28,22;UBERON:0006925,5.11e-28,22;UBERON:0009497,5.11e-28,22;UBERON:0000015,5.11e-28,22;UBERON:0002423,5.11e-28,22;UBERON:0006235,5.11e-28,22;UBERON:0008835,5.11e-28,22;UBERON:0003894,5.11e-28,22;UBERON:0004161,5.11e-28,22;UBERON:0008836,5.11e-28,22;UBERON:0009854,8.48e-27,23;UBERON:0009856,8.48e-27,23;UBERON:0002365,1.19e-24,25;UBERON:0002330,1.19e-24,25;UBERON:0005256,1.24e-13,45;UBERON:0003914,4.83e-13,47;UBERON:0005172,1.68e-12,49;UBERON:0005173,1.68e-12,49;UBERON:0002417,1.68e-12,49;UBERON:0000916,1.68e-12,49;UBERON:0003929,4.14e-11,55;UBERON:0002368,3.68e-10,60;UBERON:0003104,5.46e-10,61;UBERON:0009142,5.46e-10,61;UBERON:0002530,2.35e-09,65;UBERON:0000490,3.29e-09,66;UBERON:0009569,3.29e-09,66;UBERON:0005911,8.54e-09,69;UBERON:0000949,2.05e-08,72;UBERON:0005177,1.23e-07,79;UBERON:0001041,1.55e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,1.3599426674155,11.3337670243942,3.24888208723835,1.79210754838934,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,14.3768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chrX:20134685..20134694,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=211 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:20134685..20134694,+ | |||
|id=chrX:20134685..20134694,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.58e-11!5;CL:0000417!9.58e-11!5;CL:0000668!9.58e-11!5;CL:0000412!9.58e-11!5;CL:0000182!9.58e-11!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.12e-31,5;CL:0000057,5.74e-11,1;CL:0000632,5.74e-11,1;CL:0000223,3.08e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.66e-46!22;UBERON:0007499!1.66e-46!22;UBERON:0006925!1.66e-46!22;UBERON:0009497!1.66e-46!22;UBERON:0000015!1.66e-46!22;UBERON:0002423!1.66e-46!22;UBERON:0006235!1.66e-46!22;UBERON:0008835!1.66e-46!22;UBERON:0003894!1.66e-46!22;UBERON:0004161!1.66e-46!22;UBERON:0008836!1.66e-46!22;UBERON:0009854!2.63e-44!23;UBERON:0009856!2.63e-44!23;UBERON:0002365!1.96e-40!25;UBERON:0002330!1.96e-40!25;UBERON:0003914!1.45e-19!47;UBERON:0005256!1.45e-19!47;UBERON:0005172!1.35e-18!49;UBERON:0005173!1.35e-18!49;UBERON:0002417!1.35e-18!49;UBERON:0000916!1.35e-18!49;UBERON:0005057!1.05e-17!51;UBERON:0003929!4.09e-16!55;UBERON:0002368!2.00e-14!60;UBERON:0002530!5.37e-13!65;UBERON:0000490!9.76e-13!66;UBERON:0009569!9.76e-13!66;UBERON:0005911!5.29e-12!69;UBERON:0002405!8.99e-12!70;UBERON:0000949!2.49e-11!72;UBERON:0000466!5.81e-10!79;UBERON:0001041!5.31e-09!92;UBERON:0005177!5.71e-09!85;UBERON:0000077!2.57e-08!97;UBERON:0002100!3.05e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.11e-28,22;UBERON:0007499,5.11e-28,22;UBERON:0006925,5.11e-28,22;UBERON:0009497,5.11e-28,22;UBERON:0000015,5.11e-28,22;UBERON:0002423,5.11e-28,22;UBERON:0006235,5.11e-28,22;UBERON:0008835,5.11e-28,22;UBERON:0003894,5.11e-28,22;UBERON:0004161,5.11e-28,22;UBERON:0008836,5.11e-28,22;UBERON:0009854,8.48e-27,23;UBERON:0009856,8.48e-27,23;UBERON:0002365,1.19e-24,25;UBERON:0002330,1.19e-24,25;UBERON:0005256,1.24e-13,45;UBERON:0003914,4.83e-13,47;UBERON:0005172,1.68e-12,49;UBERON:0005173,1.68e-12,49;UBERON:0002417,1.68e-12,49;UBERON:0000916,1.68e-12,49;UBERON:0003929,4.14e-11,55;UBERON:0002368,3.68e-10,60;UBERON:0003104,5.46e-10,61;UBERON:0009142,5.46e-10,61;UBERON:0002530,2.35e-09,65;UBERON:0000490,3.29e-09,66;UBERON:0009569,3.29e-09,66;UBERON:0005911,8.54e-09,69;UBERON:0000949,2.05e-08,72;UBERON:0005177,1.23e-07,79;UBERON:0001041,1.55e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,1.3599426674155,11.3337670243942,3.24888208723835,1.79210754838934,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.162135226775035,1.09824565275233,14.3768206527355,1.11642284300551,0.312037673114561,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:20134685..20134694,+ | |||
}} |
Revision as of 19:42, 14 September 2013
Short description: | p@chrX:20134685..20134694, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:20134685..20134694, + |
Coexpression cluster: | MCL_coexpression_mm9:211 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.12e-31 | 5 |
fibroblast | 5.74e-11 | 1 |
hepatic stellate cell | 5.74e-11 | 1 |
endodermal cell | 3.08e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.11e-28 | 22 |
epithelial sac | 5.11e-28 | 22 |
digestive gland | 5.11e-28 | 22 |
epithelium of foregut-midgut junction | 5.11e-28 | 22 |
anatomical boundary | 5.11e-28 | 22 |
hepatobiliary system | 5.11e-28 | 22 |
foregut-midgut junction | 5.11e-28 | 22 |
hepatic diverticulum | 5.11e-28 | 22 |
liver primordium | 5.11e-28 | 22 |
septum transversum | 5.11e-28 | 22 |
liver bud | 5.11e-28 | 22 |
digestive tract diverticulum | 8.48e-27 | 23 |
sac | 8.48e-27 | 23 |
exocrine gland | 1.19e-24 | 25 |
exocrine system | 1.19e-24 | 25 |
trunk mesenchyme | 1.24e-13 | 45 |
epithelial tube | 4.83e-13 | 47 |
abdomen element | 1.68e-12 | 49 |
abdominal segment element | 1.68e-12 | 49 |
abdominal segment of trunk | 1.68e-12 | 49 |
abdomen | 1.68e-12 | 49 |
gut epithelium | 4.14e-11 | 55 |
endocrine gland | 3.68e-10 | 60 |
mesenchyme | 5.46e-10 | 61 |
entire embryonic mesenchyme | 5.46e-10 | 61 |
gland | 2.35e-09 | 65 |
unilaminar epithelium | 3.29e-09 | 66 |
subdivision of trunk | 3.29e-09 | 66 |
endo-epithelium | 8.54e-09 | 69 |
endocrine system | 2.05e-08 | 72 |
trunk region element | 1.23e-07 | 79 |
foregut | 1.55e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.