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FFCP PHASE1:Hg19::chr1:56990054..56990076,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C666|description=CAGE_peak_at_chr1:56990054..56990076,-|id=chr1:56990054..56990076,-|ontology_enrichment_celltype=CL:0000057!8.63e-14!75;CL:0002620!1.19e-08!23|ontology_enrichment_celltype_v019=CL:0000135;1.82e-13;3!CL:0000388;1.82e-13;3!CL:0000153;4.85e-11;9!CL:0000447;4.85e-11;9!CL:0000499;3.96e-10;28!CL:0000327;5.45e-09;15!CL:0002617;7.97e-09;2!CL:0000136;2.86e-07;13|ontology_enrichment_celltype_v019_2=CL:0000135,1.88e-13,3;CL:0000388,1.88e-13,3;CL:0000153,2.97e-11,9;CL:0000447,2.97e-11,9;CL:0000499,2.70e-10,28;CL:0000327,3.31e-09,15;CL:0000136,8.05e-09,15;CL:0002617,1.25e-08,2;CL:0000057,7.19e-08,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.39e-15!115;UBERON:0000475!2.62e-09!365;UBERON:0000468!6.59e-09!659;UBERON:0003102!2.54e-07!95|ontology_enrichment_uberon_v019=UBERON:0007846;1.82e-13;3!UBERON:0000043;1.82e-13;3!UBERON:0007845;1.82e-13;3!UBERON:0000341;1.83e-08;2!UBERON:0004905;3.55e-08;8!UBERON:0000982;3.55e-08;8!UBERON:0004770;3.55e-08;8!UBERON:0004457;1.85e-07;9!UBERON:0000042;1.85e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.88e-13,3;UBERON:0000043,1.88e-13,3;UBERON:0007845,1.88e-13,3;UBERON:0000341,1.84e-08,2;UBERON:0004905,2.23e-08,8;UBERON:0000982,2.23e-08,8;UBERON:0004770,2.23e-08,8|phase1_expression=1.09007027562334,2.78330681058278,0.704772020479856,3.00219895059391,0,1.74467704820074,0,0.631719873426831,1.30592814099919,0,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.818718450173537,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.44575660953827,1.50401373190767,3.0417768981773,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.413303124703062,1.18800285728205,1.7308685049499,0.910161361938026,0,0,0.250237039743928,0,0.438977620880838,1.22595118319608,0.600952235626387,0,0.717558542755448,0.85422955527427,0.847727604638247,0,0.515262646192195,0.257640540045629,0.18611685633159,0.337552664482532,0.876933046450788,1.00973509697646,1.19664868234989,4.68773564774555,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,2.17048642156577,0,0,0,0,0,0,0,1.2162378064119,0,0,0,1.14861935834114,0,0.723906533337896,1.2328579353023,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,1.47229790062968,1.50051156317903,0,1.24782516918484,2.85486382075459,0.315404830067869,0.702848489956279,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0.992431231275107,0.153461973288062,1.12264037773229,0.256278298511402,1.02341449813341,0,0,0.154209693802656,0,0.492762936082855,1.03850885836724,0.929683027679674,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0,0,0,0,0.48335359146061,0,0.15350367472613,0.137836572484531,0.107420244868274,1.0151168573996,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0.855877976067841,0,0,0,0,0,0,0,0.421258456238981,0,0.731140468893853,0,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,6.33322905892992,8.89096210991735,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0.969332746095218,1.20598527610407,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0,0,0,0.538651809526579,0,0,0,0.108647371922008,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.14135307143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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C666
|description=CAGE_peak_at_chr1:56990054..56990076,-
|id=chr1:56990054..56990076,-
|ontology_enrichment_celltype=CL:0000057!8.63e-14!75;CL:0002620!1.19e-08!23
|ontology_enrichment_celltype_v019=CL:0000135;1.82e-13;3!CL:0000388;1.82e-13;3!CL:0000153;4.85e-11;9!CL:0000447;4.85e-11;9!CL:0000499;3.96e-10;28!CL:0000327;5.45e-09;15!CL:0002617;7.97e-09;2!CL:0000136;2.86e-07;13
|ontology_enrichment_celltype_v019_2=CL:0000135,1.88e-13,3;CL:0000388,1.88e-13,3;CL:0000153,2.97e-11,9;CL:0000447,2.97e-11,9;CL:0000499,2.70e-10,28;CL:0000327,3.31e-09,15;CL:0000136,8.05e-09,15;CL:0002617,1.25e-08,2;CL:0000057,7.19e-08,76
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!7.39e-15!115;UBERON:0000475!2.62e-09!365;UBERON:0000468!6.59e-09!659;UBERON:0003102!2.54e-07!95
|ontology_enrichment_uberon_v019=UBERON:0007846;1.82e-13;3!UBERON:0000043;1.82e-13;3!UBERON:0007845;1.82e-13;3!UBERON:0000341;1.83e-08;2!UBERON:0004905;3.55e-08;8!UBERON:0000982;3.55e-08;8!UBERON:0004770;3.55e-08;8!UBERON:0004457;1.85e-07;9!UBERON:0000042;1.85e-07;9
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.88e-13,3;UBERON:0000043,1.88e-13,3;UBERON:0007845,1.88e-13,3;UBERON:0000341,1.84e-08,2;UBERON:0004905,2.23e-08,8;UBERON:0000982,2.23e-08,8;UBERON:0004770,2.23e-08,8
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|short_description=p@chr1:56990054..56990076,-
}}

Revision as of 18:40, 10 January 2014

Short description:p@chr1:56990054..56990076, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:56990054..56990076, -
Coexpression cluster:C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data