FFCP PHASE1:Hg19::chr1:60314016..60314043,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C790 | |||
|description=CAGE_peak_at_chr1:60314016..60314043,+ | |||
|id=chr1:60314016..60314043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.04e-20;5!CL:1000415;1.46e-13;2!CL:0002321;1.47e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.55e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.17e-11!143;DOID:171!1.52e-11!10;DOID:305!3.76e-08!106;DOID:3095!3.57e-07!22;DOID:2994!3.57e-07!22;DOID:4362!4.15e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:171;1.66e-88;10!DOID:3095;1.74e-40;22!DOID:2994;1.74e-40;22!DOID:169;1.93e-17;6!DOID:3193;1.00e-13;2!DOID:962;1.00e-13;2!DOID:1192;1.35e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.43e-88,10;DOID:3095,1.63e-40,22;DOID:2994,1.63e-40,22;DOID:169,1.85e-17,6;DOID:3193,9.40e-14,2;DOID:962,9.40e-14,2;DOID:1192,1.30e-09,3;DOID:0050687,1.70e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002530!2.02e-08!59;UBERON:0002771!1.65e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.33e-99;4!UBERON:0000923;7.33e-99;4!UBERON:0010316;7.33e-99;4!UBERON:0005291;7.33e-99;4!UBERON:0002050;2.87e-79;5!UBERON:0005423;2.87e-79;5!UBERON:0000013;1.04e-20;5!UBERON:0002410;1.04e-20;5!UBERON:0003714;1.00e-13;2!UBERON:0000010;5.67e-12;8!UBERON:0002110;1.74e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.93e-21,5;UBERON:0002410,9.93e-21,5;UBERON:0003714,9.40e-14,2;UBERON:0000010,5.52e-12,8;UBERON:0002110,1.81e-09,3;UBERON:0006242,1.81e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,3.2076507472158,0,0,0.482385754501632,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0,0,0,0,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,1.56441106187842,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.202210631562555,0,0,0,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,2.20172318598255,0,30.3821228617705,15.5179691674228,22.8041806236564,3.35186950783946,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,1.93458368795583,0,0.535701835878287,0.672567444437648,0.606965604236632,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0.347716544605159,0,0,0.17071847709395,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:60314016..60314043,+ | |||
}} |
Revision as of 18:44, 10 January 2014
Short description: | p@chr1:60314016..60314043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:60314016..60314043, + |
Coexpression cluster: | C790_neuroectodermal_carcinoid_neuroblastoma_neuroepithelioma_acute_peripheral_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.93e-21 | 5 |
autonomic nervous system | 9.93e-21 | 5 |
neural tissue | 9.40e-14 | 2 |
peripheral nervous system | 5.52e-12 | 8 |
gallbladder | 1.81e-09 | 3 |
gall bladder primordium | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.43e-88 | 10 |
germ cell and embryonal cancer | 1.63e-40 | 22 |
germ cell cancer | 1.63e-40 | 22 |
neuroendocrine tumor | 1.85e-17 | 6 |
peripheral nerve sheath neoplasm | 9.40e-14 | 2 |
neurofibroma | 9.40e-14 | 2 |
peripheral nervous system neoplasm | 1.30e-09 | 3 |
cell type cancer | 1.70e-08 | 143 |