FFCP PHASE1:Hg19::chr1:103544421..103544430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C926 | |||
|description=CAGE_peak_at_chr1:103544421..103544430,- | |||
|id=chr1:103544421..103544430,- | |||
|ontology_enrichment_celltype=CL:0000055!7.79e-09!180;CL:0002615!1.59e-07!3;CL:0002580!5.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.04e-18;3!CL:0002580;1.42e-18;3!CL:0002579;1.42e-18;3!CL:0002334;6.92e-18;12!CL:0000136;1.12e-16;13!CL:0002616;2.41e-14;1!CL:0000138;8.11e-10;6!CL:0002617;3.56e-08;2!CL:0002549;4.85e-08;2!CL:0000153;7.87e-07;9!CL:0000447;7.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.69e-19,3;CL:0002580,1.36e-18,3;CL:0002579,1.94e-18,3;CL:0002334,7.89e-18,12;CL:0000136,1.53e-14,15;CL:0002616,2.11e-14,1;CL:0000058,8.11e-10,6;CL:0000138,8.11e-10,6;CL:0002617,3.56e-08,2;CL:0002549,4.69e-08,2;CL:0000153,7.87e-07,9;CL:0000447,7.87e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.45e-10!11;UBERON:0006876!2.45e-10!11;UBERON:0005284!5.73e-10!5;UBERON:0003688!2.07e-09!6;UBERON:0002358!2.07e-09!6;UBERON:0003684!2.07e-09!6;UBERON:0001178!2.07e-09!6;UBERON:0000475!4.32e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.72e-35;6!UBERON:0002358;1.72e-35;6!UBERON:0003684;1.72e-35;6!UBERON:0001178;1.72e-35;6!UBERON:0004457;8.23e-24;9!UBERON:0000042;8.23e-24;9!UBERON:0000310;1.20e-12;10!UBERON:0001443;1.50e-11;11!UBERON:0005629;4.85e-08;2!UBERON:0005358;4.85e-08;2!UBERON:0001886;4.85e-08;2!UBERON:0004086;4.85e-08;2!UBERON:0005282;4.85e-08;2!UBERON:0005281;4.85e-08;2!UBERON:0005406;8.04e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.96e-35,6;UBERON:0002358,1.96e-35,6;UBERON:0003684,1.96e-35,6;UBERON:0001178,1.96e-35,6;UBERON:0004457,6.34e-18,12;UBERON:0000042,6.34e-18,12;UBERON:0000310,1.18e-12,10;UBERON:0001443,1.47e-11,11;UBERON:0005629,4.69e-08,2;UBERON:0005358,4.69e-08,2;UBERON:0001886,4.69e-08,2;UBERON:0004086,4.69e-08,2;UBERON:0005282,4.69e-08,2;UBERON:0005281,4.69e-08,2;UBERON:0005406,7.52e-08,2;UBERON:0009569,8.00e-07,112 | |||
|phase1_expression=0.726713517082227,7.06531728840244,0.986680828671798,6.00439790118782,1.78784437770915,1.74467704820074,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,1.5905718941022,5.35298357332899,0.567208902984407,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0.717558542755448,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0,0.535286966391485,0,0,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,3.6830873589135,1.40330047216537,0,3.07024349440022,1.28683136914886,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0.732555718546747,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.435050081742686,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.190630193923825,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41837027607914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.994581110581374,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0.647782773655864,0,0.0714765441766563,0,2.20858708199438,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0,0,0,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:103544421..103544430,- | |||
}} |
Revision as of 19:51, 10 January 2014
Short description: | p@chr1:103544421..103544430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:103544421..103544430, - |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.69e-19 | 3 |
preadipocyte of the breast | 1.36e-18 | 3 |
omentum preadipocyte | 1.94e-18 | 3 |
preadipocyte | 7.89e-18 | 12 |
fat cell | 1.53e-14 | 15 |
perirenal adipocyte cell | 2.11e-14 | 1 |
chondroblast | 8.11e-10 | 6 |
chondrocyte | 8.11e-10 | 6 |
adipocyte of breast | 3.56e-08 | 2 |
fibroblast of choroid plexus | 4.69e-08 | 2 |
GAG secreting cell | 7.87e-07 | 9 |
carbohydrate secreting cell | 7.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.96e-35 | 6 |
peritoneum | 1.96e-35 | 6 |
abdominal cavity | 1.96e-35 | 6 |
visceral peritoneum | 1.96e-35 | 6 |
cavity lining | 6.34e-18 | 12 |
serous membrane | 6.34e-18 | 12 |
breast | 1.18e-12 | 10 |
chest | 1.47e-11 | 11 |
vascular plexus | 4.69e-08 | 2 |
ventricle of nervous system | 4.69e-08 | 2 |
choroid plexus | 4.69e-08 | 2 |
brain ventricle | 4.69e-08 | 2 |
ventricular system of brain | 4.69e-08 | 2 |
ventricular system of central nervous system | 4.69e-08 | 2 |
perirenal fat | 7.52e-08 | 2 |
subdivision of trunk | 8.00e-07 | 112 |