FFCP PHASE1:Hg19::chr1:150240750..150240769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29509 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=196bp_to_ENST00000476538_5end | |||
|description=CAGE_peak_8_at_APH1A_5end | |||
|id=chr1:150240750..150240769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.15e-12;4!CL:0000731;1.15e-12;4!CL:0002077;2.51e-11;34!CL:0000148;1.10e-10;10!CL:0002166;1.67e-10;3!CL:0000840;2.13e-08;5!CL:0002159;1.88e-07;14!CL:0000147;2.00e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.62e-13,4;CL:0000731,5.62e-13,4;CL:0002077,1.46e-12,34;CL:0002166,9.45e-11,3;CL:0000148,1.24e-10,10;CL:0000541,1.24e-10,10;CL:0000840,4.19e-08,5;CL:0001029,4.19e-08,5;CL:0002159,1.61e-07,14;CL:0000147,2.17e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.87e-10;5!UBERON:0000486;5.29e-09;12!UBERON:0005910;1.89e-08;6!UBERON:0001708;5.78e-08;4!UBERON:0008895;5.78e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.20e-10,5;UBERON:0005910,1.19e-08,6;UBERON:0001708,3.79e-08,4;UBERON:0008895,3.79e-08,4 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.57345710739562,0,1.23852898652861,0.919421224478927,1.8072355126695,0.369754010166788,0,0,0,0,0,0.217010870715852,0,1.29557466407592,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,1.6446715520873,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0.845021145247767,1.06302149982522,1.04829322754188,0.336985893439485,0.150176892841506,0.32145117339416,1.42506371870624,0.39783335439818,1.0959849225878,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,0,0,0,0,0,0.196709770113833,0,0.205601498999509,2.67498392625085,0,0.473447805734733,1.94826728407911,1.44833593950726,0.294605907474837,1.32920336750173,1.08321545506006,5.25174410875268,4.68213651215562,1.64437904603676,0.829050053357545,0.869409257205157,0.14828656316206,0.802622484269139,0,0.906474741580529,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.534880391567015,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,1.29818957461873,1.0447784237956,1.19662164466979,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0.775250277507987,1.77883131343355,0.33472061276467,0.805658634218294,0,1.46437234528902,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0,0.624320153660641,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,3.67195621010264,0.818238361772504,2.86804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,1.86575485194663,1.1240175325762,0.804231779293047,0.462942225792648,0,0,0,0,0,1.01056513432752,0,1.14152491340759,0,0,0.246217006087397,0.936017060556951,0.297262324577456,5.62403003920662,1.6798212819886,2.69372684760534,1.61205340865127,0.581267877027924,0.383382679165211,0.985326475791887,0.264145302039678,1.03664057770386,0.144119953416961,0.25248486685276,1.20645999155121,1.14596527667483,1.17217447210047,0,1.95372236136315,3.30377363628309,2.5724378936752,0,0.43596006883328,0,0.646358578788889,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,2.41151501647669,0.871533458600294,0.599837947092342,6.08118903205952,0,4.21667878966063,0,0,0,0.289562613335158,0,0,0.112085143993527,0.197030760201927,0.862510299438069,0.77005821767849,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,0.647142602455851,0.106727557803444,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,1.80455823272956,0.736647911487171,0,0,0.131124414959424,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0,0,0.270946437543853,0,0.254876273045038,2.49322802678617,0,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,1.65284915360978,0.576570202095319,0.510450849978337,0.708104465988849,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0,0,1.73632660280006,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.865999014529609,0,0,0.282431402330337,1.29151611801369,3.36942951335251,1.7737206141467,1.60806380144872,0,0,0,0.476463550915578,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.682760689712998,0.254253650292766,0.472775363535873,0.344743373241465,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0.296521128680622,0.123563938946503,0,0.202203398942031,0,0,0,0.19566461893209,1.21390189767046,0.394584402849391,0,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.678923115418936,1.1473296469895,0.225980740780532,0,0,0.126621591911757,0,0,0.640358984218058,0,0.288180834308212,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0.0607495566580247,0.335434687599266,0.472834243795189,0.157363764404994,0,0,0,0,0.662091970365432,0.25426853765475,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.3407760435708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| |||
|short_description=p8@APH1A | |||
}} |
Revision as of 20:40, 10 January 2014
Short description: | p8@APH1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APH1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_ENST00000476538_5end |
EntrezGene: | APH1A |
HGNC: | 29509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.62e-13 | 4 |
urothelial cell | 5.62e-13 | 4 |
ecto-epithelial cell | 1.46e-12 | 34 |
epithelial cell of Malassez | 9.45e-11 | 3 |
melanocyte | 1.24e-10 | 10 |
melanoblast | 1.24e-10 | 10 |
immature conventional dendritic cell | 4.19e-08 | 5 |
common dendritic progenitor | 4.19e-08 | 5 |
general ecto-epithelial cell | 1.61e-07 | 14 |
pigment cell | 2.17e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.20e-10 | 5 |
transitional epithelium | 1.19e-08 | 6 |
jaw skeleton | 3.79e-08 | 4 |
splanchnocranium | 3.79e-08 | 4 |