FFCP PHASE1:Hg19::chr1:165864800..165864818,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469256_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_9_at_UCK2_5end | |||
|id=chr1:165864800..165864818,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.35e-13!246;CL:0002321!4.50e-13!248;CL:0000144!6.04e-11!625;CL:0000548!2.23e-08!679;CL:0000004!2.23e-08!679;CL:0000255!2.23e-08!679;CL:0000012!3.60e-08!682;CL:0000077!1.08e-07!19;CL:0002371!2.63e-07!591;CL:0000359!3.62e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.74e-20;3!CL:0002568;2.74e-07;1!CL:0002581;2.74e-07;1!CL:0000134;3.61e-07;55!CL:0002594;4.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.77e-20,3;CL:0002581,1.83e-07,1;CL:0002568,3.20e-07,1;CL:0002594,3.41e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.58e-08;1!UBERON:0004140;2.74e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!9.44e-11!14;DOID:193!2.77e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3571;1.17e-07;1!DOID:2394;4.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.25e-07,1;DOID:2394,4.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002118!2.39e-07!5;UBERON:0004532!2.39e-07!5;UBERON:0005631!8.28e-07!14;UBERON:0000158!8.28e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.74e-20;3!UBERON:0000920;5.74e-20;3!UBERON:0001310;4.69e-07;4!UBERON:0002119;7.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.77e-20,3;UBERON:0003124,5.24e-15,7;UBERON:0005631,1.53e-07,14;UBERON:0000158,1.53e-07,14;UBERON:0001310,3.41e-07,4;UBERON:0002119,5.89e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0,0.436882744260345,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,1.06748995729705,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0.427114777637135,0,0,0.515262646192195,0,0,0.337552664482532,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,1.15956511897978,0.818238361772504,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.6798212819886,0.708875486211932,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.901029173531752,0,0,0,0.07333828582095,1.16344544182,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,2.61460037580088,0.99972991182057,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.616838775210622,0.710246901252508,0.246381468041427,0,0,0,1.00253235151642,0,0.918515585316854,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,18.3413000732946,0,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0.826424576804891,0.384380134730212,0.382838137483752,0,1.39453664789186,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,1.33441135746677,0,0,0,0,0,0,0,0.808729926293264,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,2.43492452355245,0,0.281695602532241,0,0.392996164052485,1.78335525740625,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,18.4521849522487,1.72202149068492,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.409074730008619,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.179515288819544,0.760531603454056,6.06102203490647,12.640467889457,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,1.07493555978762,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.443565449968902,1.43367090447332,0,1.24210365501008,0,0.797525143673985,2.60872530905867,0.601030435988874,0.380805212168795,0.406870733204662,0.545545977607678,1.18151612746737,0.928067519756987,0.796191777397232,2.00013882331577,0,0,0,0.385239660814607,0.428883182749851,0,0.226705925512272,0.694567422971502,0.244736704506468,0.179088841081487,0,0,0.530067437837643,1.15748422962549,0,0,0,2.12701969324168,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,27.9412466012312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@UCK2 | |||
}} |
Revision as of 22:03, 10 January 2014
Short description: | p9@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UCK2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000469256_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.77e-20 | 3 |
perirenal preadipocyte | 1.83e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.20e-07 | 1 |
smooth muscle cell of the umbilical artery | 3.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.77e-20 | 3 |
chorion | 5.24e-15 | 7 |
extraembryonic membrane | 1.53e-07 | 14 |
membranous layer | 1.53e-07 | 14 |
umbilical artery | 3.41e-07 | 4 |
left ovary | 5.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.25e-07 | 1 |
ovarian cancer | 4.02e-07 | 14 |