FFCP PHASE1:Hg19::chr1:225707252..225707275,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:225707252..225707275,- | |||
|id=chr1:225707252..225707275,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;5.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.96e-14!143;DOID:162!5.85e-10!235;DOID:14566!1.57e-09!239;DOID:3095!5.12e-09!22;DOID:2994!5.12e-09!22;DOID:305!1.62e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.76e-08;22!DOID:2994;3.76e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.19e-08,22;DOID:2994,5.19e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.68e-12!94;UBERON:0001016!1.68e-12!94;UBERON:0001017!2.41e-12!82;UBERON:0000955!1.50e-11!69;UBERON:0006238!1.50e-11!69;UBERON:0007023!2.57e-11!115;UBERON:0005743!1.07e-10!86;UBERON:0001049!4.64e-10!57;UBERON:0005068!4.64e-10!57;UBERON:0006241!4.64e-10!57;UBERON:0007135!4.64e-10!57;UBERON:0000924!4.72e-10!173;UBERON:0006601!4.72e-10!173;UBERON:0002346!1.07e-09!90;UBERON:0004121!7.60e-09!169;UBERON:0002616!1.29e-08!59;UBERON:0002780!2.52e-08!41;UBERON:0001890!2.52e-08!41;UBERON:0006240!2.52e-08!41;UBERON:0003075!2.88e-08!86;UBERON:0007284!2.88e-08!86;UBERON:0003080!7.86e-08!42;UBERON:0005156!1.31e-07!59;UBERON:0000990!1.31e-07!59;UBERON:0003101!1.56e-07!22;UBERON:0000079!1.56e-07!22;UBERON:0002020!3.97e-07!34;UBERON:0003528!3.97e-07!34;UBERON:0000033!4.75e-07!123;UBERON:0000153!5.64e-07!129;UBERON:0007811!5.64e-07!129;UBERON:0001893!7.91e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;1.20e-10;22!UBERON:0000079;1.20e-10;22!UBERON:0003135;3.82e-08;11!UBERON:0006947;3.50e-07;3!UBERON:0004054;3.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,5.79e-11,22;UBERON:0000079,5.79e-11,22;UBERON:0003135,2.13e-08,11;UBERON:0006947,1.86e-07,3;UBERON:0004054,1.86e-07,3;UBERON:0007023,3.84e-07,114;UBERON:0002346,6.42e-07,86;UBERON:0001016,8.12e-07,89;UBERON:0003978,8.72e-07,3;UBERON:0009751,8.72e-07,3;UBERON:0000946,8.72e-07,3;UBERON:0002523,8.72e-07,3;UBERON:0005983,8.72e-07,3;UBERON:0002165,8.72e-07,3;UBERON:0002062,8.72e-07,3;UBERON:0007280,8.72e-07,3 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,2.00146596706261,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0.495065411840187,0.331397375727916,1.34465029290355,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,1.46368447355514,1.45782745153634,0.69716365721711,0.518305275076852,1.26160425437814,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0.723033089650446,0.330881918197182,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0,0,0,0.219500570817251,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.358234090811393,0,0,0.492663237895943,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,1.79951384127703,0,0,0,0,0,0,0.723906533337896,2.05476322550383,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0.167516265334349,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,1.45579603071565,0.892144943985809,0.473107245101804,0.819989904948992,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0.909382714338778,1.66435439510497,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0,0.164254312027618,0,0,0.120859449591622,0.200506470303285,0.276242966807689,2.41110341145674,4.91646153618136,1.83574180943194,0,0,0,0,0,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.330037999682352,0.574265537996172,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0.580066775656914,0.255679882248303,0.0890320356467374,0,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0,0,0,0,0.78494864019923,2.33834194858309,0,0,0,0,0,0,0,0,2.32049849393576,1.41405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0,0,0,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0.307160702099232,0,0.844016498463076,0.445234820091624,0,2.53350489753592,2.78947183551498,0.276283915531148,0.251932747854276,1.84083628503879,0,0.311039587661807,0.269605053441981,0.716084698702437,0,1.08507746200627,0,1.11136990144637,0.969332746095218,0.649376687132959,0,0.260427761085233,0.174919999992391,0,0.796554137998498,0.508507300585533,0.945550727071745,0.689486746482929,0.291604613383254,0.173624994933292,0,0.844175070377856,0,0.110579259931225,0.295547618953547,1.31631238292384,0,0.278847488557207,0.692552326534174,0.341826167541004,0.922255617552241,0.448788222048861,0.108647371922008,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.326465616318295,0,0.649165919226273,0,0.265372693510018,1.83309043480088,0.889563386041866,0,0.104421949505455,1.01101699471016,2.40773294189637,0.937057782901357,0,0.19566461893209,0.242780379534093,4.73501283419269,0,0.61214552326098,0.568679216656392,0,0.311064574191741,0,0,0.941798755221676,0,1.13843818411917,0.138674673013139,0.520679215005393,0.293977192243133,0.0870592065804026,1.92199335066233,2.23581842213102,0.0967563312890851,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0.274083849293502,0,0.443175571691151,0.195551382734803,0.160317640503067,0.85381197895741,0.599428828746391,0.144090417154106,0.687219576995494,0.857974989309823,0,0,0.235694034616795,1.22313785466253,0.836822770498666,0.305994652908965,0.288950589901519,1.2008405774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| |||
|short_description=p@chr1:225707252..225707275,- | |||
}} |
Revision as of 00:26, 11 January 2014
Short description: | p@chr1:225707252..225707275, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:225707252..225707275, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
male organism | 5.79e-11 | 22 |
male reproductive system | 5.79e-11 | 22 |
male reproductive organ | 2.13e-08 | 11 |
male genital duct | 1.86e-07 | 3 |
internal male genitalia | 1.86e-07 | 3 |
adult organism | 3.84e-07 | 114 |
neurectoderm | 6.42e-07 | 86 |
nervous system | 8.12e-07 | 89 |
valve | 8.72e-07 | 3 |
cardiac mesenchyme | 8.72e-07 | 3 |
cardial valve | 8.72e-07 | 3 |
tunica intima | 8.72e-07 | 3 |
heart layer | 8.72e-07 | 3 |
endocardium | 8.72e-07 | 3 |
endocardial cushion | 8.72e-07 | 3 |
presumptive endocardium | 8.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.19e-08 | 22 |
germ cell cancer | 5.19e-08 | 22 |