FFCP PHASE1:Hg19::chr1:243418740..243418751,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28920 | |||
|TSSclassifier=strong | |||
|UniProt=E7ES90,F8W8A3,Q5SW79 | |||
|association_with_transcript=-32bp_to_ENST00000424081,ENST00000532008,NM_001042404,NM_001042405,NM_014812,uc001hzs.2,uc001hzt.2,uc001hzu.2_5end | |||
|description=CAGE_peak_11_at_CEP170_5end | |||
|id=chr1:243418740..243418751,- | |||
|ontology_enrichment_celltype=CL:0002057!4.01e-13!42;CL:0000860!1.45e-12!45;CL:0000766!2.66e-12!76;CL:0000557!3.79e-12!71;CL:0000037!3.34e-11!172;CL:0000566!3.34e-11!172;CL:0000839!4.02e-11!70;CL:0002194!5.86e-11!63;CL:0000576!5.86e-11!63;CL:0000040!5.86e-11!63;CL:0000559!5.86e-11!63;CL:0000738!5.88e-11!140;CL:0002009!6.14e-11!65;CL:0000763!3.20e-10!112;CL:0000049!3.20e-10!112;CL:0002032!5.76e-10!165;CL:0000837!5.76e-10!165;CL:0002087!8.34e-10!119;CL:0002031!1.11e-09!124;CL:0000048!1.12e-09!430;CL:0000034!1.22e-09!444;CL:0000723!4.98e-09!436;CL:0000988!8.69e-09!182;CL:0000134!9.11e-09!358;CL:0002320!7.35e-08!365;CL:0000219!4.39e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.42e-12;33!CL:0002057;5.42e-12;33!CL:0000473;5.30e-07;39!CL:0000234;5.30e-07;39!CL:0000576;7.31e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-11,42;CL:0002057,1.50e-11,42;CL:0000473,1.16e-09,48;CL:0000234,1.16e-09,48;CL:0000738,3.80e-09,136;CL:0000037,3.24e-08,168;CL:0000557,6.92e-08,67;CL:0002009,7.16e-08,61;CL:0002031,1.80e-07,120;CL:0000988,1.94e-07,177;CL:0002087,3.84e-07,115;CL:0002194,4.73e-07,59;CL:0000576,4.73e-07,59;CL:0000040,4.73e-07,59;CL:0000559,4.73e-07,59;CL:0000766,4.79e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.38e-10!80;UBERON:0001474!6.92e-09!86;UBERON:0004765!2.33e-08!101;UBERON:0001434!2.33e-08!101;UBERON:0002193!2.38e-08!112;UBERON:0003081!3.52e-08!216;UBERON:0002390!4.91e-08!102;UBERON:0003061!4.91e-08!102;UBERON:0002384!1.29e-07!375;UBERON:0002405!2.11e-07!115;UBERON:0002204!4.98e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.10e-08,203;UBERON:0001474,1.51e-07,82;UBERON:0002371,1.90e-07,76 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.0821005894499457,0.0787107813136792,0.393364276848904,1.53531759238885,0.464448369948228,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,1.17440175733939,0.553995408531877,1.60435557976113,0.434021741431704,0.223915474239924,0.647787332037959,0.77272670290256,1.01778767145695,0.755751887377619,0.727752183563449,0.929716147622738,0.822335776043652,0.309706370895104,1.43846196161075,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,1.31769637679823,1.63743690034707,1.12361742222542,1.53041946185451,1.60464513538047,0,0.989553900560148,0.797854630486527,0.852449501065388,0.290209238628584,2.8369261234557,2.4912889959823,0.75374599577023,1.0429658368404,1.08594422352558,0.605399502633369,1.10483290796269,1.58231193720442,0.422510572623884,0.212604299965044,0,0.786300418025466,0.901061357049038,0,0.285012743741249,0.99458338599545,0.91332076882317,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.1384259382189,3.52342313622563,1.14681968437569,5.28685314316103,2.24203425192614,0.526768169550154,0.393419540227666,1.57204305099666,0.822405995998037,0.334372990781356,1.95553359980154,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.25618263945135,0,0,0,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0.766440987203842,1.37450978193052,0.506039384039006,0,0,0,0.451725357233318,0.127986611154418,0,0,0,0.403213486449465,1.33720097891754,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0.43917392846563,0.196468613246569,0,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0,1.71598473234038,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,1.37559020970034,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,1.10298924103761,0.81014194788176,0.803697554556718,1.12264686313085,0.788280363383256,1.53316637465883,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,1.01304409331664,0.926864265692532,1.43418310374407,0.709336764396714,2.80338800071154,1.06748995729705,0.74000264525148,0.933633106199299,1.48181739276657,0.817309515567294,0,0.576175924479999,0,0.624320153660641,0,1.04614076386261,1.40921398372518,0,1.12360645361799,0.816616685019573,0.368502951935304,0.309977343527296,0,0.494533858557114,0.910161361938026,0,0.336672227908132,0.500474079487857,0.554128230968366,0,0.30648779579902,0.150238058906597,0.567160915800105,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0.757301322732344,0.0920498986422993,0.161646056818812,1.06502877754984,0.503760491138201,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,1.7658523976586,0,0.343135620597051,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.587043471179108,0.433099343283221,0,0.570762456703795,0,0,0.738651018262192,0.234004265139238,0.743155811443641,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.581267877027924,0,0.492663237895943,0.264145302039678,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.22001485746285,0.517086863031111,0,1.690605505112,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,2.61460037580088,0.399891964728228,0,0,0,0.479249710983165,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0.112085143993527,1.97030760201927,1.50939302401662,0.513372145118994,0,0,0,0.335032530668698,0,0.749007023947182,0,0.414415513436035,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.955719759148911,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0,0,0,0.744323423456331,0.920771839728375,0,0.256278298511402,1.02341449813341,0.321707842287215,0,1.69630663182921,0.532685175939381,1.39616165223476,0.519254429183621,0.813472649219715,0.120859449591622,0.200506470303285,0,0,0.728364672026868,0.262248829918848,0,0.616122696835318,0,0,0.316654886678627,0,0,0.647747748306418,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0.48335359146061,0.308097234229289,0.307007349452259,0.413509717453592,0.537101224341368,0.435050081742686,0.170453254832202,0.178064071293475,0,0.384380134730212,0.127612712494584,0,0.464845549297286,1.88887408098384,2.0911118104818,0.308033580176089,1.06461206063404,1.73986598415015,2.22389062924704,0.429374660225974,0.372158369359667,0.316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| |||
|short_description=p11@CEP170 | |||
}} |
Revision as of 01:04, 11 January 2014
Short description: | p11@CEP170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CEP170_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000424081, ENST00000532008, NM_001042404, NM_001042405, NM_014812, uc001hzs.2, uc001hzt.2, uc001hzu.2_5end |
EntrezGene: | CEP170 |
HGNC: | 28920 |
UniProt: | E7ES90F8W8A3Q5SW79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-11 | 42 |
defensive cell | 1.16e-09 | 48 |
phagocyte | 1.16e-09 | 48 |
leukocyte | 3.80e-09 | 136 |
hematopoietic stem cell | 3.24e-08 | 168 |
granulocyte monocyte progenitor cell | 6.92e-08 | 67 |
macrophage dendritic cell progenitor | 7.16e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 1.80e-07 | 120 |
hematopoietic cell | 1.94e-07 | 177 |
nongranular leukocyte | 3.84e-07 | 115 |
monopoietic cell | 4.73e-07 | 59 |
monocyte | 4.73e-07 | 59 |
monoblast | 4.73e-07 | 59 |
promonocyte | 4.73e-07 | 59 |
myeloid leukocyte | 4.79e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.10e-08 | 203 |
bone element | 1.51e-07 | 82 |
bone marrow | 1.90e-07 | 76 |