FFCP PHASE1:Hg19::chr10:110359333..110359353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:110359333..110359353,+ | |||
|id=chr10:110359333..110359353,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.12e-12!24;CL:0000826!4.12e-12!24;CL:1000507!1.39e-09!12;CL:1000494!1.39e-09!12;CL:0002681!7.93e-09!13;CL:0002584!7.93e-09!13;CL:0002573!5.90e-08!2;CL:0000542!1.81e-07!53;CL:0000051!1.81e-07!53;CL:0000243!2.30e-07!15;CL:0000125!2.30e-07!15;CL:0000030!2.30e-07!15;CL:0000339!2.30e-07!15;CL:0000239!3.53e-07!3;CL:1000615!3.53e-07!3;CL:0002306!3.53e-07!3;CL:1000449!4.01e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.46e-22;15!CL:0000125;1.46e-22;15!CL:0002573;8.98e-22;2!CL:0000095;3.34e-20;17!CL:0000946;5.11e-17;1!CL:0000786;5.11e-17;1!CL:0000945;5.57e-16;24!CL:0002319;3.04e-14;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.33e-22,15;CL:0000125,1.33e-22,15;CL:0000030,1.33e-22,15;CL:0000339,1.33e-22,15;CL:0002573,8.53e-22,2;CL:0000095,3.08e-20,17;CL:0000123,3.08e-20,17;CL:0000946,5.53e-17,1;CL:0000786,5.53e-17,1;CL:0000980,5.53e-17,1;CL:0000945,5.48e-16,24;CL:0000826,5.48e-16,24;CL:0002319,2.88e-14,25;CL:0000785,3.71e-09,2;CL:0000955,3.71e-09,2;CL:0000818,3.71e-09,2;CL:0000954,3.71e-09,2;CL:0000816,3.71e-09,2;CL:0000333,5.81e-09,41;CL:0000838,2.22e-07,52;CL:0000542,3.07e-07,53;CL:0000051,3.07e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000339;1.46e-22;15!UBERON:0006238;4.75e-13;10!CL:0000954;3.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;5.15e-12;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.87e-12,11 | |||
|ontology_enrichment_uberon=UBERON:0003887!4.06e-10!21;UBERON:0001851!5.57e-10!16;UBERON:0009773!1.39e-09!12;UBERON:0001231!1.39e-09!12;UBERON:0004810!1.39e-09!12;UBERON:0001225!7.93e-09!13;UBERON:0008987!7.93e-09!13;UBERON:0005172!2.60e-08!55;UBERON:0005173!2.60e-08!55;UBERON:0002113!1.13e-07!27;UBERON:0003918!1.13e-07!27;UBERON:0005095!1.13e-07!27;UBERON:0007687!1.13e-07!27;UBERON:0002106!2.49e-07!3;UBERON:0004854!2.49e-07!3;UBERON:0009034!2.49e-07!3;UBERON:0002095!2.49e-07!3;UBERON:0004782!2.49e-07!3;UBERON:0003281!2.49e-07!3;UBERON:0009664!2.49e-07!3;UBERON:0002296!2.49e-07!3;UBERON:0005602!2.49e-07!3;UBERON:0001179!2.49e-07!3;UBERON:0006293!2.49e-07!3;UBERON:0002417!2.70e-07!61;UBERON:0000916!2.70e-07!61;UBERON:0006853!3.53e-07!3;UBERON:0007685!3.53e-07!3;UBERON:0004134!3.53e-07!3;UBERON:0004211!4.01e-07!16;UBERON:0001285!4.01e-07!16;UBERON:0007684!4.01e-07!16;UBERON:0003220!4.01e-07!16;UBERON:0004208!4.01e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;6.89e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.77e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.95562122019805,2.75487734597877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35393286007176,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14536596165916,0,0,0,0,1.35904206073614,1.255234155748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45871587340577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688859918643263,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07029545245429,0,0,0,0,0.889851215136553,0,0,0.280272163313789,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,5.32494003287544,4.77195066651283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:110359333..110359353,+ | |||
}} |
Revision as of 04:55, 11 January 2014
Short description: | p@chr10:110359333..110359353, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:110359333..110359353, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.33e-22 | 15 |
glial cell | 1.33e-22 | 15 |
glioblast | 1.33e-22 | 15 |
glioblast (sensu Vertebrata) | 1.33e-22 | 15 |
Schwann cell | 8.53e-22 | 2 |
neuron associated cell | 3.08e-20 | 17 |
neuron associated cell (sensu Vertebrata) | 3.08e-20 | 17 |
antibody secreting cell | 5.53e-17 | 1 |
plasma cell | 5.53e-17 | 1 |
plasmablast | 5.53e-17 | 1 |
lymphocyte of B lineage | 5.48e-16 | 24 |
pro-B cell | 5.48e-16 | 24 |
neural cell | 2.88e-14 | 25 |
mature B cell | 3.71e-09 | 2 |
pre-B-II cell | 3.71e-09 | 2 |
transitional stage B cell | 3.71e-09 | 2 |
small pre-B-II cell | 3.71e-09 | 2 |
immature B cell | 3.71e-09 | 2 |
migratory neural crest cell | 5.81e-09 | 41 |
lymphoid lineage restricted progenitor cell | 2.22e-07 | 52 |
lymphocyte | 3.07e-07 | 53 |
common lymphoid progenitor | 3.07e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.87e-12 | 11 |