FFCP PHASE1:Hg19::chr11:1950008..1950019,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr11:1950008..1950019,+ | |||
|id=chr11:1950008..1950019,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.54e-18!3;CL:0002577!1.54e-18!3;CL:0002541!4.35e-18!3;CL:0002580!2.53e-17!3;CL:0002334!1.60e-11!12;CL:0002537!2.36e-11!5;CL:0002581!3.17e-07!1;CL:0002616!3.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.01e-74;3!CL:0000349;1.88e-63;19!CL:0002541;1.08e-33;3!CL:0002581;1.11e-25;1!CL:0002537;4.92e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.54e-74,3;CL:0000349,1.79e-63,19;CL:0002541,1.08e-33,3;CL:0002581,1.26e-25,1;CL:0002537,4.92e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.11e-32!14;UBERON:0000158!1.11e-32!14;UBERON:0003124!8.77e-30!7;UBERON:0000478!2.05e-18!24;UBERON:0000476!4.35e-18!3;UBERON:0000920!4.35e-18!3;UBERON:0001987!4.91e-14!4;UBERON:0004340!4.91e-14!4;UBERON:0005406!9.95e-13!2;UBERON:0004923!3.39e-10!57;UBERON:0001013!5.22e-10!14;UBERON:0000310!3.52e-09!10;UBERON:0001443!2.36e-08!11;UBERON:0000305!3.13e-08!7;UBERON:0004871!2.99e-07!8;UBERON:0006122!4.01e-07!1;UBERON:0007029!5.37e-07!1;UBERON:0001000!6.02e-07!1;UBERON:0005352!6.02e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.34e-56;4!UBERON:0000478;2.59e-50;24!UBERON:0005631;5.25e-40;10!UBERON:0000158;5.25e-40;10!UBERON:0003124;1.08e-33;3!UBERON:0000920;1.08e-33;3!UBERON:0000305;2.47e-15;7!UBERON:0005406;1.46e-13;2!UBERON:0000077;6.14e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.50e-87,7;UBERON:0005631,5.51e-86,14;UBERON:0000158,5.51e-86,14;UBERON:0001987,6.68e-56,4;UBERON:0004340,6.68e-56,4;UBERON:0000478,2.50e-50,24;UBERON:0000920,1.08e-33,3;UBERON:0004923,1.94e-18,66;UBERON:0000305,2.47e-15,7;UBERON:0004871,1.51e-13,8;UBERON:0005406,1.55e-13,2;UBERON:0000995,2.61e-11,21;UBERON:0005795,7.93e-11,22;UBERON:0003975,7.93e-11,22;UBERON:0004175,1.31e-09,25;UBERON:0000077,2.27e-08,29 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,1.66435439510497,4.83824469327489,0.248107807818777,0.153461973288062,0.841980283299221,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,6.44610108791763,0.890894042497916,11.6721066797708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.87101043758728,0.366390373607449,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:1950008..1950019,+ | |||
}} |
Revision as of 06:05, 11 January 2014
Short description: | p@chr11:1950008..1950019, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1950008..1950019, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.54e-74 | 3 |
extraembryonic cell | 1.79e-63 | 19 |
chorionic membrane mesenchymal stem cell | 1.08e-33 | 3 |
perirenal preadipocyte | 1.26e-25 | 1 |
amnion mesenchymal stem cell | 4.92e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.50e-87 | 7 |
extraembryonic membrane | 5.51e-86 | 14 |
membranous layer | 5.51e-86 | 14 |
placenta | 6.68e-56 | 4 |
allantois | 6.68e-56 | 4 |
extraembryonic structure | 2.50e-50 | 24 |
egg chorion | 1.08e-33 | 3 |
organ component layer | 1.94e-18 | 66 |
amnion | 2.47e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.51e-13 | 8 |
perirenal fat | 1.55e-13 | 2 |
uterus | 2.61e-11 | 21 |
embryonic uterus | 7.93e-11 | 22 |
internal female genitalia | 7.93e-11 | 22 |
internal genitalia | 1.31e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.27e-08 | 29 |