FFCP PHASE1:Hg19::chr11:2159838..2159847,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-167bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_16_at_BC017277_5end | |||
|id=chr11:2159838..2159847,+ | |||
|ontology_enrichment_celltype=CL:0002537!4.17e-09!5;CL:0000349!4.24e-09!3;CL:0002577!4.24e-09!3;CL:0002541!5.38e-09!3;CL:0002575!7.78e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.13e-48;19!CL:0002575;1.53e-20;2!CL:0002536;8.72e-20;2!CL:0002537;6.26e-18;5!CL:0002541;3.52e-14;3!CL:0002577;1.13e-13;3!CL:0000669;9.52e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.49e-49,19;CL:0002575,1.53e-20,2;CL:0002536,5.94e-20,2;CL:0002537,4.98e-18,5;CL:0002541,3.64e-14,3;CL:0002577,9.60e-14,3;CL:0000669,9.52e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.57e-08;11!UBERON:0009497;5.45e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.12e-31!14;UBERON:0000158!8.12e-31!14;UBERON:0000478!5.00e-22!24;UBERON:0003124!9.62e-19!7;UBERON:0000305!6.29e-14!7;UBERON:0004871!4.49e-12!8;UBERON:0001987!1.87e-11!4;UBERON:0004340!1.87e-11!4;UBERON:0000476!5.38e-09!3;UBERON:0000920!5.38e-09!3;UBERON:0004923!6.56e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.61e-46;10!UBERON:0000158;2.61e-46;10!UBERON:0000478;2.90e-38;24!UBERON:0000305;7.17e-34;7!UBERON:0003124;3.52e-14;3!UBERON:0000920;3.52e-14;3!UBERON:0002426;5.05e-11;1!UBERON:0003831;5.05e-11;1!UBERON:0003898;5.05e-11;1!UBERON:0004830;5.05e-11;1!UBERON:0003830;5.05e-11;1!UBERON:0005175;5.05e-11;1!UBERON:0001774;5.05e-11;1!UBERON:0001103;5.05e-11;1!UBERON:0001987;1.73e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.46e-54,14;UBERON:0000158,2.46e-54,14;UBERON:0000478,1.88e-38,24;UBERON:0000305,4.15e-34,7;UBERON:0004871,7.50e-30,8;UBERON:0003124,1.85e-22,7;UBERON:0000920,3.64e-14,3;UBERON:0002426,5.57e-11,1;UBERON:0003831,5.57e-11,1;UBERON:0003898,5.57e-11,1;UBERON:0004830,5.57e-11,1;UBERON:0003830,5.57e-11,1;UBERON:0005175,5.57e-11,1;UBERON:0001774,5.57e-11,1;UBERON:0001103,5.57e-11,1;UBERON:0010084,5.57e-11,1;UBERON:0004923,1.34e-10,66;UBERON:0001987,1.54e-10,4;UBERON:0004340,1.54e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.74753097704138,2.37390280405608,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,3.32861967686659,6.17658162859541,0,0,0,0.909382714338778,1.66435439510497,4.23346410661552,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,1.78178808499583,5.83605333988541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.46112780877612,0,0,5.74202087517455,0.274792780205587,14.9249737285218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,3.77508995296322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0.630265458457789,1.40106959247983,1.01105315781277,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,2.3196288626764,0,0,1.39265542612958,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,1.1903221573187,0,0,0,0,0.606351566874658,0,2.05339980651169,0,0,0.665320713092027,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p16@BC017277 | |||
}} |
Revision as of 06:10, 11 January 2014
Short description: | p16@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -167bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.49e-49 | 19 |
central nervous system pericyte | 1.53e-20 | 2 |
amniotic epithelial cell | 5.94e-20 | 2 |
amnion mesenchymal stem cell | 4.98e-18 | 5 |
chorionic membrane mesenchymal stem cell | 3.64e-14 | 3 |
placental epithelial cell | 9.60e-14 | 3 |
pericyte cell | 9.52e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.46e-54 | 14 |
membranous layer | 2.46e-54 | 14 |
extraembryonic structure | 1.88e-38 | 24 |
amnion | 4.15e-34 | 7 |
somatic layer of lateral plate mesoderm | 7.50e-30 | 8 |
chorion | 1.85e-22 | 7 |
egg chorion | 3.64e-14 | 3 |
chest muscle | 5.57e-11 | 1 |
respiratory system muscle | 5.57e-11 | 1 |
skeletal muscle of trunk | 5.57e-11 | 1 |
respiratory system skeletal muscle | 5.57e-11 | 1 |
thoracic segment muscle | 5.57e-11 | 1 |
chest organ | 5.57e-11 | 1 |
muscle of trunk | 5.57e-11 | 1 |
diaphragm | 5.57e-11 | 1 |
future diaphragm | 5.57e-11 | 1 |
organ component layer | 1.34e-10 | 66 |
placenta | 1.54e-10 | 4 |
allantois | 1.54e-10 | 4 |