FFCP PHASE1:Hg19::chr11:5246845..5246859,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_CU675538_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_CU675538_5end | |||
|id=chr11:5246845..5246859,+ | |||
|ontology_enrichment_celltype=CL:0000764!5.75e-18!2;CL:0000765!5.75e-18!2;CL:0000050!5.75e-18!2;CL:0000038!5.75e-18!2;CL:0000558!5.75e-18!2;CL:0000547!5.75e-18!2;CL:0000549!5.75e-18!2;CL:0000550!5.75e-18!2;CL:0000552!5.75e-18!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.04e-36;2!CL:0000558;2.04e-36;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.04e-36,2;CL:0000765,2.04e-36,2;CL:0000050,2.04e-36,2;CL:0000038,2.04e-36,2;CL:0000558,2.04e-36,2;CL:0000547,2.04e-36,2;CL:0000549,2.04e-36,2;CL:0000550,2.04e-36,2;CL:0000552,2.04e-36,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.94e-55!15;UBERON:0000179!2.94e-55!15;UBERON:0000463!2.94e-55!15;UBERON:0007023!6.32e-16!115;UBERON:0007029!1.15e-09!1;UBERON:0004535!5.07e-09!110;UBERON:0001009!9.97e-09!113;UBERON:0002390!3.75e-08!102;UBERON:0003061!3.75e-08!102;UBERON:0002193!2.85e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.26e-96;15!UBERON:0000179;3.26e-96;15!UBERON:0000463;3.26e-96;15!UBERON:0002390;4.43e-41;32!UBERON:0002193;8.46e-23;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.26e-96,15;UBERON:0000179,3.26e-96,15;UBERON:0000463,3.26e-96,15;UBERON:0007023,1.73e-18,114;UBERON:0002390,3.05e-14,98;UBERON:0003061,3.05e-14,98;UBERON:0004535,6.96e-13,109;UBERON:0002193,6.96e-13,108;UBERON:0001009,1.60e-12,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7007567927943,33.4637377311873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2830091508224,45.1135952214001,61.5218962148096,38.355315848704,62.9384277821877,18.1572527133961,18.3610688660959,101.520022565667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,83.8190823214289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CU675538 | |||
}} |
Revision as of 06:18, 11 January 2014
Short description: | p1@CU675538 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675538_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 17bp_to_CU675538_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.04e-36 | 2 |
erythroblast | 2.04e-36 | 2 |
megakaryocyte-erythroid progenitor cell | 2.04e-36 | 2 |
erythroid progenitor cell | 2.04e-36 | 2 |
reticulocyte | 2.04e-36 | 2 |
proerythroblast | 2.04e-36 | 2 |
basophilic erythroblast | 2.04e-36 | 2 |
polychromatophilic erythroblast | 2.04e-36 | 2 |
orthochromatic erythroblast | 2.04e-36 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.26e-96 | 15 |
haemolymphatic fluid | 3.26e-96 | 15 |
organism substance | 3.26e-96 | 15 |
adult organism | 1.73e-18 | 114 |
hematopoietic system | 3.05e-14 | 98 |
blood island | 3.05e-14 | 98 |
cardiovascular system | 6.96e-13 | 109 |
hemolymphoid system | 6.96e-13 | 108 |
circulatory system | 1.60e-12 | 112 |