FFCP PHASE1:Hg19::chr11:7618437..7618448,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000529321_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_20_at_PPFIBP2_5end | |||
|id=chr11:7618437..7618448,+ | |||
|ontology_enrichment_celltype=CL:0000622!8.20e-11!5;CL:0000154!5.28e-09!6;CL:0002327!1.42e-07!4;CL:0000317!1.71e-07!2;CL:1000448!1.71e-07!2;CL:0002308!1.71e-07!2;CL:0002140!1.71e-07!2;CL:0000575!3.86e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.21e-15;1!CL:0000159;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.17e-15,1;CL:0000159,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.56e-16;1!UBERON:0000358;9.98e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-15;1!DOID:10165;2.21e-15;1!DOID:3151;2.21e-15;1!DOID:2152;2.21e-15;1!DOID:1798;2.21e-15;1!DOID:3149;2.21e-15;1!DOID:5093;2.66e-15;4!DOID:1612;2.66e-15;4!DOID:3451;2.40e-08;2!DOID:4159;2.40e-08;2!DOID:0060122;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.54e-15,1;DOID:10165,1.54e-15,1;DOID:1798,1.54e-15,1;DOID:5093,2.76e-15,4;DOID:1612,2.76e-15,4;DOID:2152,3.17e-15,1;DOID:3151,3.66e-15,1;DOID:3149,3.66e-15,1;DOID:3451,3.08e-08,2;DOID:4159,3.08e-08,2;DOID:0060122,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.47e-16!21;UBERON:0000161!1.18e-14!35;UBERON:0001044!7.99e-14!6;UBERON:0003293!7.99e-14!6;UBERON:0003294!7.99e-14!6;UBERON:0010047!7.99e-14!6;UBERON:0000167!7.99e-14!6;UBERON:0000165!1.12e-13!28;UBERON:0000930!1.12e-13!28;UBERON:0000078!1.06e-12!18;UBERON:0001007!4.50e-11!155;UBERON:0001555!4.50e-11!155;UBERON:0007026!4.50e-11!155;UBERON:0003408!4.60e-11!10;UBERON:0000974!1.38e-10!10;UBERON:0004119!2.30e-10!169;UBERON:0000925!2.30e-10!169;UBERON:0006595!2.30e-10!169;UBERON:0003729!4.33e-10!5;UBERON:0001444!1.40e-09!48;UBERON:0001723!2.27e-09!3;UBERON:0001033!2.27e-09!3;UBERON:0010056!2.27e-09!3;UBERON:0003102!2.29e-09!95;UBERON:0002530!1.60e-08!59;UBERON:0004921!1.81e-08!129;UBERON:0004185!1.81e-08!129;UBERON:0002365!1.96e-08!31;UBERON:0002330!1.96e-08!31;UBERON:0003343!1.16e-07!4;UBERON:0004785!1.16e-07!4;UBERON:0003127!1.37e-07!2;UBERON:0001911!1.42e-07!4;UBERON:0005333!1.42e-07!4;UBERON:0008425!1.42e-07!4;UBERON:0005311!1.42e-07!4;UBERON:0001829!1.60e-07!2;UBERON:0002419!1.71e-07!2;UBERON:0007771!1.71e-07!2;UBERON:0003297!1.71e-07!2;UBERON:0001821!1.71e-07!2;UBERON:0003487!1.71e-07!2;UBERON:0001820!1.71e-07!2;UBERON:0005089!1.71e-07!2;UBERON:0005088!1.71e-07!2;UBERON:0000341!2.00e-07!2;UBERON:0007023!3.17e-07!115;UBERON:0001004!3.29e-07!72;UBERON:0001042!3.73e-07!10;UBERON:0009145!3.73e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.21e-15;1!UBERON:0001044;1.50e-10;6!UBERON:0003293;1.50e-10;6!UBERON:0003294;1.50e-10;6!UBERON:0010047;1.50e-10;6!UBERON:0003408;1.50e-10;6!UBERON:0000167;1.50e-10;6!UBERON:0003127;2.40e-08;2!UBERON:0004909;2.40e-08;2!UBERON:0000161;2.04e-07;19!UBERON:0000166;2.04e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.17e-15,1;UBERON:0001044,1.57e-10,6;UBERON:0003293,1.57e-10,6;UBERON:0003294,1.57e-10,6;UBERON:0010047,1.57e-10,6;UBERON:0000167,1.57e-10,6;UBERON:0003127,1.86e-08,2;UBERON:0004909,2.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,1.04171104434093,10.3202799995511,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,5.99522100397994,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,4.03542916747694,0.115525666150338,0,0,0,0.0752103283492573,0,0,1.30953347240711,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17739639275771,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,2.07377898544228,2.15113679410139,0,0,0,0,0,0,1.00669888618013,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0.0645889098360061,0,0,0.318235791390825,1.0105859447911,0.217716747896961,0.342233301085281,0.80822463617505,0.430333232356058,1.66330178273007,0,0,0,0,2.34640942403454,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p20@PPFIBP2 | |||
}} |
Revision as of 06:25, 11 January 2014
Short description: | p20@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PPFIBP2_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -19bp_to_ENST00000529321_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.17e-15 | 1 |
seromucus secreting cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.17e-15 | 1 |
saliva-secreting gland | 1.57e-10 | 6 |
gland of oral region | 1.57e-10 | 6 |
gland of foregut | 1.57e-10 | 6 |
oral gland | 1.57e-10 | 6 |
oral cavity | 1.57e-10 | 6 |
open tracheal system trachea | 1.86e-08 | 2 |
epithelium of gonad | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.54e-15 | 1 |
endocrine pancreas cancer | 1.54e-15 | 1 |
pancreatic endocrine carcinoma | 1.54e-15 | 1 |
thoracic cancer | 2.76e-15 | 4 |
breast cancer | 2.76e-15 | 4 |
ovary epithelial cancer | 3.17e-15 | 1 |
skin squamous cell carcinoma | 3.66e-15 | 1 |
keratoacanthoma | 3.66e-15 | 1 |
skin carcinoma | 3.08e-08 | 2 |
skin cancer | 3.08e-08 | 2 |
integumentary system cancer | 3.08e-08 | 2 |