FFCP PHASE1:Hg19::chr11:12695944..12695989,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11714 | |||
|TSSclassifier=strong | |||
|UniProt=P28347,A4FUP2,Q59EF3 | |||
|association_with_transcript=0bp_to_ENST00000361905,NM_021961,uc001mkj.3_5end | |||
|description=CAGE_peak_1_at_TEAD1_5end | |||
|id=chr11:12695944..12695989,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!1.18e-18!75;CL:0002620!1.33e-10!23;CL:0000133!4.35e-08!59;CL:0000220!2.89e-07!246;CL:0002321!4.09e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-10;23!CL:0000057;1.78e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.45e-19,76;CL:0002620,1.20e-10,23;CL:0000133,4.06e-08,59;CL:0002321,2.73e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.14e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.42e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.75e-16!365;UBERON:0003102!6.78e-14!95;UBERON:0000481!5.12e-13!347;UBERON:0003104!1.06e-09!238;UBERON:0009142!1.06e-09!238;UBERON:0002097!1.17e-09!40;UBERON:0002199!1.71e-09!45;UBERON:0002416!1.71e-09!45;UBERON:0000468!2.41e-09!659;UBERON:0002100!4.53e-09!216;UBERON:0005256!3.83e-08!143;UBERON:0000062!1.72e-07!511;UBERON:0000064!2.26e-07!219;UBERON:0000480!3.28e-07!626;UBERON:0000467!3.35e-07!625;UBERON:0001007!3.58e-07!155;UBERON:0001555!3.58e-07!155;UBERON:0007026!3.58e-07!155;UBERON:0000924!6.72e-07!173;UBERON:0006601!6.72e-07!173;UBERON:0000914!9.34e-07!83;UBERON:0002329!9.34e-07!83;UBERON:0003077!9.34e-07!83;UBERON:0003059!9.34e-07!83;UBERON:0007282!9.34e-07!83;UBERON:0009618!9.34e-07!83;UBERON:0007285!9.34e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.07e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.94e-13,99;UBERON:0002097,1.64e-09,41;UBERON:0002199,2.27e-09,46;UBERON:0002416,2.27e-09,46;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0003104,2.95e-08,160;UBERON:0009142,2.95e-08,160;UBERON:0004119,1.61e-07,160;UBERON:0000925,1.61e-07,160;UBERON:0006595,1.61e-07,160;UBERON:0002100,1.84e-07,199;UBERON:0005256,8.92e-07,122 | |||
|phase1_expression=45.6012731969097,51.170025209945,55.1131720015247,68.0498428801287,41.1204206873105,40.127572108617,35.4619829435635,19.5833160762318,34.7376885505785,21.8703203486343,20.9340350391728,57.013198125975,28.2230666704445,27.5998967100904,37.1165060815266,24.2037052722639,38.5724497935345,24.1002329827833,19.5173119516203,42.5998860945686,42.2281430875604,41.3760232351076,37.7831503012995,62.4147378332352,53.8577923861704,0,0.0821005894499457,0,0,0,6.19264493264304,19.3078457140575,25.301297177373,24.403764671008,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,8.47559303686716,0.368277635987565,1.26584954976354,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0.393419540227666,0,0.822405995998037,0,0,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,117.027295830702,40.9127524419218,29.5362517858555,39.3968676099177,38.1016812083276,43.5988022072079,15.905718941022,40.3906942351188,56.4372858469485,69.4013014057825,55.5115845580557,29.6012710624831,18.2147644146271,22.9886354526346,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,9.73935796096855,11.1830497363796,13.8856200643038,16.3939303157963,15.9409785759764,15.4066103486438,11.7037181260614,21.4485910110543,20.9902094985159,29.7901345360556,6.0424397566372,6.0821768457481,12.6912269925048,13.6035339727971,13.7724131139899,24.646725006406,28.9642890687759,19.5943976040981,16.8648301212472,8.54339093611316,12.0913150994069,0,0,6.97750483428055,64.6063537203914,47.613072385882,48.4617601776381,95.516594709355,60.2936249737207,39.8081096101038,26.6872489324262,25.4067574869675,50.1049766993624,36.7760134750248,49.528956643378,40.4124331811967,57.6175924479999,40.5376077072468,38.7078495269597,22.818872861778,32.7292610408444,74.3360376415032,90.1632300130493,73.3153210985737,61.8587138902327,67.4360402041606,75.4278202583088,98.6042371544104,107.561114236172,30.0353249439549,36.6495252326282,64.6410677583614,93.2132973046133,80.9027217213814,101.842808044354,76.6219489497549,71.0626018628203,25.8625377604848,128.263589517536,81.7924799175113,82.0176457487504,122.437167202436,87.5946498526731,94.8117187367915,66.8159514230407,96.2025093775217,63.3340533547791,124.702284476593,92.6021980341531,64.4967766707059,104.727829792401,57.5294480879826,58.8375255317392,29.1823888276578,31.365803867946,30.6880917066234,21.3453985726792,27.301132274226,26.4922189742502,29.1287564593191,19.4287055174234,41.9723962937204,68.837794225119,71.3997441394103,30.3896826975457,47.8298965872938,31.7626971934618,54.7760484184477,65.2422750602254,59.7707354111035,57.683747739042,51.8553076939927,60.5040078733296,45.0336569254949,59.4551039329799,53.0951076586019,11.0723318193697,21.0362660705169,24.694440679884,27.931655163253,44.3642621876408,31.450470933684,44.3092430011053,0.882926198829301,32.9609015295544,38.2596216965712,29.9618279165548,26.9764207818287,35.8888431509522,30.4615984571562,26.3904727301363,50.9568044786993,31.7528952455601,23.6498026149157,50.9553732983466,9.96128489551409,10.648666789262,14.0788072653603,17.3844967551041,12.0188062693282,0,0,0,18.7467667973554,35.2762469217605,24.5270918229329,48.1824852141324,32.5510011135637,27.9869355790604,1.97065295158377,0.352193736052904,6.01251535068239,5.6206781832615,6.9433338384509,24.2561956196086,29.4131087679874,35.1652341630141,34.214489204541,40.8225146032194,60.6692976844713,80.8888804344536,36.1062091592062,18.746282959831,46.5698114963033,62.5675104267644,35.7656445851882,44.801045885468,65.9526529130479,82.1658751599792,24.1774931806414,25.5328437641901,33.3027723770124,62.3384052349523,31.4720531127037,32.9296134712308,24.1044776377364,44.4239935928182,53.0607754865398,33.1583314765545,33.9898048854115,40.1891424551869,0,0,0,33.5474797688216,45.9447743336456,84.1557739740238,50.3838947203176,69.4509970220296,67.3269221782007,0,0.197030760201927,0.431255149719035,0.128343036279748,60.2204259407238,44.2475503115914,34.0247077622186,21.7771144934653,36.3625088442303,0,0,0,37.1755219908994,40.0136416847742,32.2805378202685,63.8470544899578,80.6499029363171,98.7217118112431,137.758304031431,28.5898794741333,27.2889004867182,21.729344971426,64.4298830579373,56.9700730793863,71.9396327795726,12.9228763925409,13.7257369524342,0,0.431428401637234,0.106727557803444,17.581399143883,19.9722527412596,23.5864428797151,52.8469630653995,70.1321217926445,56.9739991699139,55.3561124784628,55.264382899204,45.1999518413537,26.7152519600984,66.4643780289445,44.3904313282818,66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| |||
|short_description=p1@TEAD1 | |||
}} |
Revision as of 06:40, 11 January 2014
Short description: | p1@TEAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TEAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361905, NM_021961, uc001mkj.3_5end |
EntrezGene: | TEAD1 |
HGNC: | 11714 |
UniProt: | P28347A4FUP2Q59EF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.45e-19 | 76 |
skin fibroblast | 1.20e-10 | 23 |
neurectodermal cell | 4.06e-08 | 59 |
embryonic cell | 2.73e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.94e-13 | 99 |
skin of body | 1.64e-09 | 41 |
integument | 2.27e-09 | 46 |
integumental system | 2.27e-09 | 46 |
digestive system | 2.42e-08 | 145 |
digestive tract | 2.42e-08 | 145 |
primitive gut | 2.42e-08 | 145 |
mesenchyme | 2.95e-08 | 160 |
entire embryonic mesenchyme | 2.95e-08 | 160 |
endoderm-derived structure | 1.61e-07 | 160 |
endoderm | 1.61e-07 | 160 |
presumptive endoderm | 1.61e-07 | 160 |
trunk | 1.84e-07 | 199 |
trunk mesenchyme | 8.92e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.42e-11 | 143 |