FFCP PHASE1:Hg19::chr11:57156583..57156603,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr11:57156583..57156603,+ | |||
|id=chr11:57156583..57156603,+ | |||
|ontology_enrichment_celltype=CL:0000764!5.40e-20!2;CL:0000765!5.40e-20!2;CL:0000050!5.40e-20!2;CL:0000038!5.40e-20!2;CL:0000558!5.40e-20!2;CL:0000547!5.40e-20!2;CL:0000549!5.40e-20!2;CL:0000550!5.40e-20!2;CL:0000552!5.40e-20!2;CL:0002541!3.19e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.91e-39;3!CL:0000349;3.16e-14;19!CL:0002537;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.91e-39,3;CL:0000349,3.16e-14,19;CL:0002537,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:8552!3.76e-11!1;DOID:225!7.46e-11!1;DOID:8692!1.31e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8552;2.73e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.19e-14!3;UBERON:0000920!3.19e-14!3;UBERON:0003124!2.80e-13!7;UBERON:0005631!1.72e-11!14;UBERON:0000158!1.72e-11!14;UBERON:0000478!9.29e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.91e-39;3!UBERON:0000920;6.91e-39;3!UBERON:0005631;2.78e-26;10!UBERON:0000158;2.78e-26;10!UBERON:0000478;2.07e-19;24!UBERON:0001987;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.91e-39,3;UBERON:0003124,4.92e-37,7;UBERON:0005631,8.89e-33,14;UBERON:0000158,8.89e-33,14;UBERON:0000478,2.12e-19,24;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4;UBERON:0004923,2.29e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783399478865116,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9431124939962,0,30.3829822330622,0,7.37807205056616,2.82559859230266,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:57156583..57156603,+ | |||
}} |
Revision as of 07:43, 11 January 2014
Short description: | p@chr11:57156583..57156603, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57156583..57156603, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.91e-39 | 3 |
extraembryonic cell | 3.16e-14 | 19 |
amnion mesenchymal stem cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.91e-39 | 3 |
chorion | 4.92e-37 | 7 |
extraembryonic membrane | 8.89e-33 | 14 |
membranous layer | 8.89e-33 | 14 |
extraembryonic structure | 2.12e-19 | 24 |
placenta | 2.43e-08 | 4 |
allantois | 2.43e-08 | 4 |
organ component layer | 2.29e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.37e-29 | 1 |