FFCP PHASE1:Hg19::chr12:20725009..20725050,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=211bp_to_ENST00000544307,NM_001244683_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_10_at_PDE3A_5end | |||
|id=chr12:20725009..20725050,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.00e-25!10;CL:0000541!2.00e-25!10;CL:0000147!3.74e-18!14;CL:0000710!1.10e-12!20;CL:0002566!1.45e-11!1;CL:0002242!1.78e-11!1;CL:0000228!1.78e-11!1;CL:0002372!1.78e-11!1;CL:0000075!2.32e-09!27;CL:0000325!5.44e-09!39;CL:0002077!1.25e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.31e-32;10!CL:0000147;4.44e-23;14!CL:0000228;6.31e-21;1!CL:0002566;6.31e-21;1!CL:0002372;6.31e-21;1!CL:0000710;2.68e-16;20!CL:0000075;3.53e-12;27!CL:0002077;6.17e-09;34!CL:0002615;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.39e-32,10;CL:0000541,3.39e-32,10;CL:0000147,3.74e-23,14;CL:0002566,4.22e-21,1;CL:0000228,6.31e-21,1;CL:0002372,6.31e-21,1;CL:0000710,2.38e-16,20;CL:0000075,3.24e-12,27;CL:0002077,8.96e-10,34;CL:0002615,8.29e-08,3;CL:0000333,8.59e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.18e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!1.70e-21!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.34e-40;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.34e-40,2 | |||
|ontology_enrichment_uberon=UBERON:0002135!2.68e-11!1;UBERON:0002581!6.00e-11!1;UBERON:0000200!2.11e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90493682876507,0.381988425558278,0,0,1.7480673759565,38.4439114040214,15.4346273620512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,2.12308764558307,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,7.71946677107889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@PDE3A | |||
}} |
Revision as of 12:34, 11 January 2014
Short description: | p10@PDE3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PDE3A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 211bp_to_ENST00000544307, NM_001244683_5end |
EntrezGene: | PDE3A |
HGNC: | 8778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.39e-32 | 10 |
melanoblast | 3.39e-32 | 10 |
pigment cell | 3.74e-23 | 14 |
dark melanocyte | 4.22e-21 | 1 |
multinucleate cell | 6.31e-21 | 1 |
myotube | 6.31e-21 | 1 |
neurecto-epithelial cell | 2.38e-16 | 20 |
columnar/cuboidal epithelial cell | 3.24e-12 | 27 |
ecto-epithelial cell | 8.96e-10 | 34 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
migratory neural crest cell | 8.59e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.34e-40 | 2 |